RNA–Protein interactions for RNA: ENST00000261037.7

COL8A1-201, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL8A1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-201ENST00000261037 RTN4RL2Q86UN3 420 aa10.15□□□□□ -0.78
COL8A1-201ENST00000261037 IL36BQ9NZH7 164 aa10.15□□□□□ -0.78
COL8A1-201ENST00000261037 SMIM13P0DJ93 91 aa10.15□□□□□ -0.78
COL8A1-201ENST00000261037 EFNB1P98172 346 aa10.15□□□□□ -0.78
COL8A1-201ENST00000261037 LY6DQ14210 128 aa10.15□□□□□ -0.78
COL8A1-201ENST00000261037 C11orf44Q8N8P7 122 aa10.15□□□□□ -0.78
COL8A1-201ENST00000261037 COPS9Q8WXC6 57 aa10.15□□□□□ -0.78
COL8A1-201ENST00000261037 FMC1Q96HJ9 113 aa10.15□□□□□ -0.78
COL8A1-201ENST00000261037 C14orf144Q96I85 54 aa10.15□□□□□ -0.78
COL8A1-201ENST00000261037 LYZL4Q96KX0 146 aa10.15□□□□□ -0.78
COL8A1-201ENST00000261037 MESP1Q9BRJ9 268 aa10.15□□□□□ -0.78
COL8A1-201ENST00000261037 PINLYPA6NC86 204 aa10.15□□□□□ -0.78
COL8A1-201ENST00000261037 CD8AP01732 235 aa10.15□□□□□ -0.78
COL8A1-201ENST00000261037 LHX2P50458 406 aa10.15□□□□□ -0.78
COL8A1-201ENST00000261037 ERASQ7Z444 233 aa10.15□□□□□ -0.78
COL8A1-201ENST00000261037 NPIPB13A6NJU9 1138 aa10.15□□□□□ -0.79
COL8A1-201ENST00000261037 IQCF6A8MYZ5 107 aa10.15□□□□□ -0.79
COL8A1-201ENST00000261037 J3QW42 95 aa10.15□□□□□ -0.79
COL8A1-201ENST00000261037 VDAC2P45880 294 aaPredicted RBP10.15□□□□□ -0.79
COL8A1-201ENST00000261037 CTAG1AP78358 180 aa10.15□□□□□ -0.79
COL8A1-201ENST00000261037 RPP21Q9H633 154 aaKnown RBP10.15□□□□□ -0.79
COL8A1-201ENST00000261037 C17orf100A8MU93 164 aa10.14□□□□□ -0.79
COL8A1-201ENST00000261037 LTBRP36941 435 aa10.14□□□□□ -0.79
COL8A1-201ENST00000261037 LINC00469Q8N7U9 141 aa10.14□□□□□ -0.79
COL8A1-201ENST00000261037 MRPL16Q9NX20 251 aaKnown RBP10.14□□□□□ -0.79
COL8A1-201ENST00000261037 MRPS16Q9Y3D3 137 aaKnown RBP10.14□□□□□ -0.79
COL8A1-201ENST00000261037 DICER1Q9UPY3 1922 aaKnown RBP10.14□□□□□ -0.79
COL8A1-201ENST00000261037 PQLC2LA1A4F0 135 aa10.14□□□□□ -0.79
COL8A1-201ENST00000261037 DNAL4O96015 105 aa10.14□□□□□ -0.79
COL8A1-201ENST00000261037 SPRR3Q9UBC9 169 aa10.14□□□□□ -0.79
COL8A1-201ENST00000261037 ZNF236Q9UL36 1845 aa10.14□□□□□ -0.79
COL8A1-201ENST00000261037 RAMP3O60896 148 aa10.14□□□□□ -0.79
COL8A1-201ENST00000261037 CEACAM1P13688 526 aa10.14□□□□□ -0.79
COL8A1-201ENST00000261037 SRD5A1P18405 259 aa10.14□□□□□ -0.79
COL8A1-201ENST00000261037 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.14□□□□□ -0.79
COL8A1-201ENST00000261037 GGACTQ9BVM4 153 aa10.14□□□□□ -0.79
COL8A1-201ENST00000261037 ANKRD36A6QL64 1941 aa10.14□□□□□ -0.79
COL8A1-201ENST00000261037 TRGV2A0A075B6R0 118 aa10.14□□□□□ -0.79
COL8A1-201ENST00000261037 A0A1B0GV90 55 aa10.14□□□□□ -0.79
COL8A1-201ENST00000261037 NSUN5P1Q3KNT7 163 aa10.14□□□□□ -0.79
COL8A1-201ENST00000261037 FAM19A2Q8N3H0 131 aa10.14□□□□□ -0.79
COL8A1-201ENST00000261037 C2orf88Q9BSF0 95 aa10.14□□□□□ -0.79
COL8A1-201ENST00000261037 DEPPQ9NTK1 212 aa10.14□□□□□ -0.79
COL8A1-201ENST00000261037 GFI1BQ5VTD9 330 aa10.13□□□□□ -0.79
COL8A1-201ENST00000261037 C1orf162Q8NEQ5 155 aaPredicted RBP10.13□□□□□ -0.79
COL8A1-201ENST00000261037 SDF2L1Q9HCN8 221 aa10.13□□□□□ -0.79
COL8A1-201ENST00000261037 A0A0G2JLM5 398 aa10.13□□□□□ -0.79
COL8A1-201ENST00000261037 DPRXA6NFQ7 191 aa10.13□□□□□ -0.79
COL8A1-201ENST00000261037 OR11H12B2RN74 326 aa10.13□□□□□ -0.79
COL8A1-201ENST00000261037 OR11H1Q8NG94 326 aa10.13□□□□□ -0.79
COL8A1-201ENST00000261037 OR11H2Q8NH07 326 aa10.13□□□□□ -0.79
COL8A1-201ENST00000261037 LINC00312Q9Y6C7 94 aa10.13□□□□□ -0.79
COL8A1-201ENST00000261037 PDCD11Q14690 1871 aaKnown RBP10.13□□□□□ -0.79
COL8A1-201ENST00000261037 IGKV1D-13A0A0B4J2D9 117 aa10.13□□□□□ -0.79
COL8A1-201ENST00000261037 IGKV1-13P0DP09 117 aa10.13□□□□□ -0.79
COL8A1-201ENST00000261037 TMEM183AQ8IXX5 376 aa10.13□□□□□ -0.79
COL8A1-201ENST00000261037 FAM131CQ96AQ9 280 aa10.13□□□□□ -0.79
COL8A1-201ENST00000261037 IMMP1LQ96LU5 166 aa10.13□□□□□ -0.79
COL8A1-201ENST00000261037 GPX4P36969 197 aaPredicted RBP10.13□□□□□ -0.79
COL8A1-201ENST00000261037 TTC32Q5I0X7 151 aa10.13□□□□□ -0.79
COL8A1-201ENST00000261037 TCF23Q7RTU1 214 aa10.13□□□□□ -0.79
COL8A1-201ENST00000261037 KIR3DL3Q8N743 410 aa10.12□□□□□ -0.79
COL8A1-201ENST00000261037 ZIC4Q8N9L1 334 aa10.12□□□□□ -0.79
COL8A1-201ENST00000261037 RNASE7Q9H1E1 156 aaKnown RBP10.12□□□□□ -0.79
COL8A1-201ENST00000261037 MTCL1Q9Y4B5 1905 aaKnown RBP10.12□□□□□ -0.79
COL8A1-201ENST00000261037 TDGF1P13385 188 aa10.12□□□□□ -0.79
COL8A1-201ENST00000261037 MRPL14Q6P1L8 145 aaKnown RBP10.12□□□□□ -0.79
COL8A1-201ENST00000261037 LINC00114Q6XXX2 140 aa10.12□□□□□ -0.79
COL8A1-201ENST00000261037 FER1L6-AS1Q8NA97 138 aa10.12□□□□□ -0.79
COL8A1-201ENST00000261037 SSBP4Q9BWG4 385 aaPredicted RBP10.12□□□□□ -0.79
COL8A1-201ENST00000261037 GP6Q9HCN6 339 aa10.12□□□□□ -0.79
COL8A1-201ENST00000261037 H7C1H1 209 aa10.12□□□□□ -0.79
COL8A1-201ENST00000261037 NBR2O15453 112 aa10.12□□□□□ -0.79
COL8A1-201ENST00000261037 CD55P08174 381 aa10.12□□□□□ -0.79
COL8A1-201ENST00000261037 LEPP41159 167 aa10.12□□□□□ -0.79
COL8A1-201ENST00000261037 LINC00527Q9UJ94 153 aa10.12□□□□□ -0.79
COL8A1-201ENST00000261037 C18orf12Q96KH6 178 aa10.12□□□□□ -0.79
COL8A1-201ENST00000261037 TET1Q8NFU7 2136 aa10.12□□□□□ -0.79
COL8A1-201ENST00000261037 A0A1B0GTI1 187 aa10.12□□□□□ -0.79
COL8A1-201ENST00000261037 SRP19P09132 144 aaKnown RBP10.12□□□□□ -0.79
COL8A1-201ENST00000261037 CD7P09564 240 aa10.12□□□□□ -0.79
COL8A1-201ENST00000261037 CA7P43166 264 aa10.12□□□□□ -0.79
COL8A1-201ENST00000261037 FBLN7Q53RD9 439 aa10.12□□□□□ -0.79
COL8A1-201ENST00000261037 STHQ8IWL8 128 aa10.12□□□□□ -0.79
COL8A1-201ENST00000261037 PMCHL2Q9BQD1 86 aa10.12□□□□□ -0.79
COL8A1-201ENST00000261037 ZNF883P0CG24 379 aa10.11□□□□□ -0.79
COL8A1-201ENST00000261037 ZNF525Q8N782 197 aa10.11□□□□□ -0.79
COL8A1-201ENST00000261037 PATJQ8NI35 1801 aa10.11□□□□□ -0.79
COL8A1-201ENST00000261037 UCP1P25874 307 aa10.11□□□□□ -0.79
COL8A1-201ENST00000261037 LDLRAD2Q5SZI1 272 aa10.11□□□□□ -0.79
COL8A1-201ENST00000261037 TRAV14DV4A0A0A6YYC5 116 aa10.11□□□□□ -0.79
COL8A1-201ENST00000261037 IGHV1-18A0A0C4DH31 117 aa10.11□□□□□ -0.79
COL8A1-201ENST00000261037 PPIFP30405 207 aaKnown RBP10.11□□□□□ -0.79
COL8A1-201ENST00000261037 MEF2CQ06413 473 aaPredicted RBP10.11□□□□□ -0.79
COL8A1-201ENST00000261037 C3orf36Q3SXR2 165 aa10.11□□□□□ -0.79
COL8A1-201ENST00000261037 LRTM2Q8N967 370 aa10.11□□□□□ -0.79
COL8A1-201ENST00000261037 A0A0G2JMZ2 1700 aa10.11□□□□□ -0.79
COL8A1-201ENST00000261037 LRRC37A2A6NM11 1700 aa10.11□□□□□ -0.79
COL8A1-201ENST00000261037 VENTXO95231 258 aa10.11□□□□□ -0.79
COL8A1-201ENST00000261037 OR10J3Q5JRS4 329 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms