RNA–Protein interactions for RNA: ENST00000258962.4

SRSF1-201, Transcript of serine and arginine rich splicing factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-201ENST00000258962 C22orf15Q8WYQ4 148 aa13.95□□□□□ -0.18
SRSF1-201ENST00000258962 HINT2Q9BX68 163 aa13.95□□□□□ -0.18
SRSF1-201ENST00000258962 RFNGQ9Y644 331 aa13.95□□□□□ -0.18
SRSF1-201ENST00000258962 ATRQ13535 2644 aa13.95□□□□□ -0.18
SRSF1-201ENST00000258962 SVEP1Q4LDE5 3571 aa13.94□□□□□ -0.18
SRSF1-201ENST00000258962 MXRA5Q9NR99 2828 aa13.94□□□□□ -0.18
SRSF1-201ENST00000258962 IGHV3OR16-10A0A075B7F0 116 aa13.94□□□□□ -0.18
SRSF1-201ENST00000258962 TRAV40A0A0B4J280 105 aa13.94□□□□□ -0.18
SRSF1-201ENST00000258962 ATP6V0CP27449 155 aa13.94□□□□□ -0.18
SRSF1-201ENST00000258962 LGALS4P56470 323 aa13.94□□□□□ -0.18
SRSF1-201ENST00000258962 C10orf55Q5SWW7 151 aa13.94□□□□□ -0.18
SRSF1-201ENST00000258962 RBMS3Q6XE24 437 aaKnown RBP13.94□□□□□ -0.18
SRSF1-201ENST00000258962 LILRB2Q8N423 598 aa13.94□□□□□ -0.18
SRSF1-201ENST00000258962 PINX1Q96BK5 328 aaKnown RBP13.94□□□□□ -0.18
SRSF1-201ENST00000258962 RNF5Q99942 180 aa13.94□□□□□ -0.18
SRSF1-201ENST00000258962 PARD6GQ9BYG4 376 aaPredicted RBP13.94□□□□□ -0.18
SRSF1-201ENST00000258962 NDUFA4L2Q9NRX3 87 aa13.94□□□□□ -0.18
SRSF1-201ENST00000258962 SIGLEC9Q9Y336 463 aa13.94□□□□□ -0.18
SRSF1-201ENST00000258962 CENPVL3A0A0U1RRI6 287 aa13.93□□□□□ -0.18
SRSF1-201ENST00000258962 A0A1B0GW64 132 aa13.93□□□□□ -0.18
SRSF1-201ENST00000258962 E7EUB6 86 aa13.93□□□□□ -0.18
SRSF1-201ENST00000258962 IFNA10P01566 189 aa13.93□□□□□ -0.18
SRSF1-201ENST00000258962 IGHV4-38-2P0DP08 117 aa13.93□□□□□ -0.18
SRSF1-201ENST00000258962 SAA4P35542 130 aa13.93□□□□□ -0.18
SRSF1-201ENST00000258962 F2RL1P55085 397 aa13.93□□□□□ -0.18
SRSF1-201ENST00000258962 RUNX1Q01196 453 aa13.93□□□□□ -0.18
SRSF1-201ENST00000258962 CCDC144NLQ6NUI1 221 aa13.93□□□□□ -0.18
SRSF1-201ENST00000258962 COMMD1Q8N668 190 aa13.93□□□□□ -0.18
SRSF1-201ENST00000258962 OR10P1Q8NGE3 313 aa13.93□□□□□ -0.18
SRSF1-201ENST00000258962 OR1L8Q8NGR8 309 aa13.93□□□□□ -0.18
SRSF1-201ENST00000258962 COMMD5Q9GZQ3 224 aa13.93□□□□□ -0.18
SRSF1-201ENST00000258962 PLEKHA3Q9HB20 300 aa13.93□□□□□ -0.18
SRSF1-201ENST00000258962 ENY2Q9NPA8 101 aa13.93□□□□□ -0.18
SRSF1-201ENST00000258962 PLXNB1O43157 2135 aa13.93□□□□□ -0.18
SRSF1-201ENST00000258962 PRSS46E5RG02 174 aa13.92□□□□□ -0.18
SRSF1-201ENST00000258962 IGKV1D-33P01593 117 aa13.92□□□□□ -0.18
SRSF1-201ENST00000258962 IGKV1-33P01594 117 aa13.92□□□□□ -0.18
SRSF1-201ENST00000258962 OR8U8P0C7N1 319 aa13.92□□□□□ -0.18
SRSF1-201ENST00000258962 CD24P25063 80 aa13.92□□□□□ -0.18
SRSF1-201ENST00000258962 BPIFB3P59826 476 aa13.92□□□□□ -0.18
SRSF1-201ENST00000258962 PRSS8Q16651 343 aa13.92□□□□□ -0.18
SRSF1-201ENST00000258962 TOR2AQ5JU69 321 aa13.92□□□□□ -0.18
SRSF1-201ENST00000258962 PIP4P2Q8N4L2 257 aa13.92□□□□□ -0.18
SRSF1-201ENST00000258962 SLC24A4Q8NFF2 622 aa13.92□□□□□ -0.18
SRSF1-201ENST00000258962 OR10W1Q8NGF6 305 aa13.92□□□□□ -0.18
SRSF1-201ENST00000258962 TMEM158Q8WZ71 300 aa13.92□□□□□ -0.18
SRSF1-201ENST00000258962 JMJD8Q96S16 334 aa13.92□□□□□ -0.18
SRSF1-201ENST00000258962 METTL1Q9UBP6 276 aaKnown RBP13.92□□□□□ -0.18
SRSF1-201ENST00000258962 NPFFO15130 113 aa13.91□□□□□ -0.18
SRSF1-201ENST00000258962 CA2P00918 260 aa13.91□□□□□ -0.18
SRSF1-201ENST00000258962 PRH1P02810 166 aa13.91□□□□□ -0.18
SRSF1-201ENST00000258962 SNRNP70P08621 437 aaKnown RBP13.91□□□□□ -0.18
SRSF1-201ENST00000258962 CAMLGP49069 296 aa13.91□□□□□ -0.18
SRSF1-201ENST00000258962 VWC2Q2TAL6 325 aa13.91□□□□□ -0.18
SRSF1-201ENST00000258962 DPPA3Q6W0C5 159 aa13.91□□□□□ -0.18
SRSF1-201ENST00000258962 OR2G3Q8NGZ4 309 aa13.91□□□□□ -0.18
SRSF1-201ENST00000258962 MALSU1Q96EH3 234 aa13.91□□□□□ -0.18
SRSF1-201ENST00000258962 EAF1Q96JC9 268 aaPredicted RBP13.91□□□□□ -0.18
SRSF1-201ENST00000258962 TMEM147Q9BVK8 224 aa13.91□□□□□ -0.18
SRSF1-201ENST00000258962 FBXL15Q9H469 300 aa13.91□□□□□ -0.18
SRSF1-201ENST00000258962 UBE2L5PA0A1B0GUS4 154 aa13.9□□□□□ -0.18
SRSF1-201ENST00000258962 INS-IGF2F8WCM5 200 aa13.9□□□□□ -0.18
SRSF1-201ENST00000258962 MOSP00540 346 aa13.9□□□□□ -0.18
SRSF1-201ENST00000258962 ZP3P21754 424 aa13.9□□□□□ -0.18
SRSF1-201ENST00000258962 NPY1RP25929 384 aa13.9□□□□□ -0.18
SRSF1-201ENST00000258962 HNF4GQ14541 408 aa13.9□□□□□ -0.18
SRSF1-201ENST00000258962 LRRC75BQ2VPJ9 315 aa13.9□□□□□ -0.18
SRSF1-201ENST00000258962 BSXQ3C1V8 233 aa13.9□□□□□ -0.18
SRSF1-201ENST00000258962 PXDC1Q5TGL8 231 aa13.9□□□□□ -0.18
SRSF1-201ENST00000258962 ETV3LQ6ZN32 361 aa13.9□□□□□ -0.18
SRSF1-201ENST00000258962 MMD2Q8IY49 270 aa13.9□□□□□ -0.18
SRSF1-201ENST00000258962 WDR61Q9GZS3 305 aaKnown RBP13.9□□□□□ -0.18
SRSF1-201ENST00000258962 ATP5IP56385 69 aaPredicted RBP13.9□□□□□ -0.19
SRSF1-201ENST00000258962 SSBP2P81877 361 aaPredicted RBP13.9□□□□□ -0.19
SRSF1-201ENST00000258962 EBI3Q14213 229 aa13.9□□□□□ -0.19
SRSF1-201ENST00000258962 BRD3OSQ6XYD6 125 aa13.9□□□□□ -0.19
SRSF1-201ENST00000258962 TMEM182Q6ZP80 229 aaPredicted RBP13.9□□□□□ -0.19
SRSF1-201ENST00000258962 PPP1R27Q86WC6 154 aa13.9□□□□□ -0.19
SRSF1-201ENST00000258962 BCL6BQ8N143 479 aaPredicted RBP13.9□□□□□ -0.19
SRSF1-201ENST00000258962 Q8N6K4 173 aa13.9□□□□□ -0.19
SRSF1-201ENST00000258962 NPBQ8NG41 125 aa13.9□□□□□ -0.19
SRSF1-201ENST00000258962 UQCC1Q9NVA1 299 aa13.9□□□□□ -0.19
SRSF1-201ENST00000258962 IGHV1-69DA0A0B4J2H0 117 aa13.89□□□□□ -0.19
SRSF1-201ENST00000258962 NDUFA3O95167 84 aa13.89□□□□□ -0.19
SRSF1-201ENST00000258962 IGHV1-69P01742 117 aa13.89□□□□□ -0.19
SRSF1-201ENST00000258962 RNASE2P10153 161 aaKnown RBP13.89□□□□□ -0.19
SRSF1-201ENST00000258962 HILS1P60008 231 aa13.89□□□□□ -0.19
SRSF1-201ENST00000258962 RAB2AP61019 212 aa13.89□□□□□ -0.19
SRSF1-201ENST00000258962 RAB11AP62491 216 aa13.89□□□□□ -0.19
SRSF1-201ENST00000258962 SRSF2Q01130 221 aaKnown RBP13.89□□□□□ -0.19
SRSF1-201ENST00000258962 MMDQ15546 238 aa13.89□□□□□ -0.19
SRSF1-201ENST00000258962 AKR1C8PQ5T2L2 129 aa13.89□□□□□ -0.19
SRSF1-201ENST00000258962 RUSC1-AS1Q66K80 236 aa13.89□□□□□ -0.19
SRSF1-201ENST00000258962 Q6ZRG5 221 aa13.89□□□□□ -0.19
SRSF1-201ENST00000258962 C9orf139Q6ZV77 190 aa13.89□□□□□ -0.19
SRSF1-201ENST00000258962 SIGLECL1Q8N7X8 197 aa13.89□□□□□ -0.19
SRSF1-201ENST00000258962 OR2T10Q8NGZ9 312 aa13.89□□□□□ -0.19
SRSF1-201ENST00000258962 PSMG3Q9BT73 122 aaPredicted RBP13.89□□□□□ -0.19
SRSF1-201ENST00000258962 RSG1Q9BU20 258 aa13.89□□□□□ -0.19
SRSF1-201ENST00000258962 A0A1W2PN81 502 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms