RNA–Protein interactions for RNA: ENST00000258607.9

CKAP2-201, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CKAP2, Length 3,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-201ENST00000258607 KLRB1Q12918 225 aa7.41□□□□□ -1.22
CKAP2-201ENST00000258607 LRRC75BQ2VPJ9 315 aa7.41□□□□□ -1.22
CKAP2-201ENST00000258607 MUC21Q5SSG8 566 aa7.41□□□□□ -1.22
CKAP2-201ENST00000258607 HIST2H2BCQ6DN03 193 aa7.41□□□□□ -1.22
CKAP2-201ENST00000258607 CLDND2Q8NHS1 167 aa7.41□□□□□ -1.22
CKAP2-201ENST00000258607 HIST1H2BAQ96A08 127 aa7.41□□□□□ -1.22
CKAP2-201ENST00000258607 GAL3ST2Q9H3Q3 398 aa7.41□□□□□ -1.22
CKAP2-201ENST00000258607 SOX21Q9Y651 276 aaPredicted RBP7.41□□□□□ -1.22
CKAP2-201ENST00000258607 SCO2A0A1W2PP80 73 aa7.4□□□□□ -1.22
CKAP2-201ENST00000258607 CD5P06127 495 aa7.4□□□□□ -1.22
CKAP2-201ENST00000258607 HOXB1P14653 301 aaPredicted RBP7.4□□□□□ -1.22
CKAP2-201ENST00000258607 RELBQ01201 579 aa7.4□□□□□ -1.22
CKAP2-201ENST00000258607 RUSC1-AS1Q66K80 236 aa7.4□□□□□ -1.22
CKAP2-201ENST00000258607 TREML4Q6UXN2 200 aa7.4□□□□□ -1.22
CKAP2-201ENST00000258607 TMEM219Q86XT9 240 aa7.4□□□□□ -1.22
CKAP2-201ENST00000258607 STPG3Q8N7X2 389 aa7.4□□□□□ -1.22
CKAP2-201ENST00000258607 PERPQ96FX8 193 aa7.4□□□□□ -1.22
CKAP2-201ENST00000258607 MS4A10Q96PG2 267 aa7.4□□□□□ -1.22
CKAP2-201ENST00000258607 SSBP3Q9BWW4 388 aaPredicted RBP7.4□□□□□ -1.22
CKAP2-201ENST00000258607 ACTR3CQ9C0K3 210 aaPredicted RBP7.4□□□□□ -1.22
CKAP2-201ENST00000258607 ZNF430Q9H8G1 570 aaPredicted RBP7.4□□□□□ -1.22
CKAP2-201ENST00000258607 HSPB7Q9UBY9 170 aa7.4□□□□□ -1.22
CKAP2-201ENST00000258607 UBR5O95071 2799 aaPredicted RBP7.4□□□□□ -1.22
CKAP2-201ENST00000258607 ZNF207O43670 478 aaKnown RBP7.4□□□□□ -1.22
CKAP2-201ENST00000258607 S100PP25815 95 aa7.4□□□□□ -1.22
CKAP2-201ENST00000258607 RAB5BP61020 215 aa7.4□□□□□ -1.22
CKAP2-201ENST00000258607 LY6EQ16553 131 aa7.4□□□□□ -1.22
CKAP2-201ENST00000258607 ARSJQ5FYB0 599 aaPredicted RBP7.4□□□□□ -1.22
CKAP2-201ENST00000258607 MORN5Q5VZ52 161 aa7.4□□□□□ -1.22
CKAP2-201ENST00000258607 UNQ6494/PRO21346Q6UXR6 183 aa7.4□□□□□ -1.22
CKAP2-201ENST00000258607 PARLQ9H300 379 aa7.4□□□□□ -1.22
CKAP2-201ENST00000258607 RPUSD1Q9UJJ7 312 aaKnown RBP7.4□□□□□ -1.22
CKAP2-201ENST00000258607 HRASP01112 189 aa7.4□□□□□ -1.23
CKAP2-201ENST00000258607 LOXP28300 417 aaPredicted RBP7.4□□□□□ -1.23
CKAP2-201ENST00000258607 Q8WTZ3 238 aa7.4□□□□□ -1.23
CKAP2-201ENST00000258607 LSM10Q969L4 123 aaKnown RBP7.4□□□□□ -1.23
CKAP2-201ENST00000258607 METTL1Q9UBP6 276 aaKnown RBP7.4□□□□□ -1.23
CKAP2-201ENST00000258607 J3KRW8 73 aa7.39□□□□□ -1.23
CKAP2-201ENST00000258607 LYZP61626 148 aa7.39□□□□□ -1.23
CKAP2-201ENST00000258607 RPL8P62917 257 aaKnown RBP7.39□□□□□ -1.23
CKAP2-201ENST00000258607 ECSCRQ19T08 205 aa7.39□□□□□ -1.23
CKAP2-201ENST00000258607 KIAA1644Q3SXP7 199 aa7.39□□□□□ -1.23
CKAP2-201ENST00000258607 TMEM41BQ5BJD5 291 aa7.39□□□□□ -1.23
CKAP2-201ENST00000258607 IGFL4Q6B9Z1 124 aa7.39□□□□□ -1.23
CKAP2-201ENST00000258607 UQCC3Q6UW78 93 aa7.39□□□□□ -1.23
CKAP2-201ENST00000258607 ZNF114Q8NC26 417 aa7.39□□□□□ -1.23
CKAP2-201ENST00000258607 C12orf57Q99622 126 aa7.39□□□□□ -1.23
CKAP2-201ENST00000258607 MGST2Q99735 147 aa7.39□□□□□ -1.23
CKAP2-201ENST00000258607 VKORC1Q9BQB6 163 aa7.39□□□□□ -1.23
CKAP2-201ENST00000258607 MRPL36Q9P0J6 103 aaKnown RBP7.39□□□□□ -1.23
CKAP2-201ENST00000258607 C22orf46C9J442 243 aa7.39□□□□□ -1.23
CKAP2-201ENST00000258607 MEF2BQ02080 365 aaPredicted RBP7.39□□□□□ -1.23
CKAP2-201ENST00000258607 DMRTC2Q8IXT2 367 aaPredicted RBP7.39□□□□□ -1.23
CKAP2-201ENST00000258607 TMEM170AQ8WVE7 144 aa7.39□□□□□ -1.23
CKAP2-201ENST00000258607 OR5B12Q96R08 314 aa7.39□□□□□ -1.23
CKAP2-201ENST00000258607 TRBV23-1A0A0A0MS06 115 aa7.39□□□□□ -1.23
CKAP2-201ENST00000258607 H7BYZ3 331 aa7.39□□□□□ -1.23
CKAP2-201ENST00000258607 TIMM23O14925 209 aa7.39□□□□□ -1.23
CKAP2-201ENST00000258607 YPEL1O60688 119 aa7.39□□□□□ -1.23
CKAP2-201ENST00000258607 KBTBD11O94819 623 aa7.39□□□□□ -1.23
CKAP2-201ENST00000258607 CRYBB3P26998 211 aa7.39□□□□□ -1.23
CKAP2-201ENST00000258607 HSPE1P61604 102 aaKnown RBP7.39□□□□□ -1.23
CKAP2-201ENST00000258607 GNG5P63218 68 aa7.39□□□□□ -1.23
CKAP2-201ENST00000258607 ZNF66Q6ZN08 573 aa7.39□□□□□ -1.23
CKAP2-201ENST00000258607 C16orf82Q7Z2V1 217 aa7.39□□□□□ -1.23
CKAP2-201ENST00000258607 YPEL2Q96QA6 119 aa7.39□□□□□ -1.23
CKAP2-201ENST00000258607 GNB4Q9HAV0 340 aa7.39□□□□□ -1.23
CKAP2-201ENST00000258607 TEX50A0A1B0GTY4 177 aa7.38□□□□□ -1.23
CKAP2-201ENST00000258607 IL6RP08887 468 aaPredicted RBP7.38□□□□□ -1.23
CKAP2-201ENST00000258607 LINC00869P0C866 280 aa7.38□□□□□ -1.23
CKAP2-201ENST00000258607 RAB5AP20339 215 aa7.38□□□□□ -1.23
CKAP2-201ENST00000258607 SPCS3P61009 180 aa7.38□□□□□ -1.23
CKAP2-201ENST00000258607 FBLN7Q53RD9 439 aa7.38□□□□□ -1.23
CKAP2-201ENST00000258607 LCNL1Q6ZST4 164 aa7.38□□□□□ -1.23
CKAP2-201ENST00000258607 IMMP2LQ96T52 175 aa7.38□□□□□ -1.23
CKAP2-201ENST00000258607 NIT2Q9NQR4 276 aa7.38□□□□□ -1.23
CKAP2-201ENST00000258607 DSCAML1Q8TD84 2053 aa7.38□□□□□ -1.23
CKAP2-201ENST00000258607 NBPF19A0A087WUL8 3843 aa7.38□□□□□ -1.23
CKAP2-201ENST00000258607 J3QW42 95 aa7.38□□□□□ -1.23
CKAP2-201ENST00000258607 LHBP01229 141 aa7.38□□□□□ -1.23
CKAP2-201ENST00000258607 HBE1P02100 147 aa7.38□□□□□ -1.23
CKAP2-201ENST00000258607 RAB7AP51149 207 aa7.38□□□□□ -1.23
CKAP2-201ENST00000258607 RHEBQ15382 184 aa7.38□□□□□ -1.23
CKAP2-201ENST00000258607 ACOT6Q3I5F7 207 aaPredicted RBP7.38□□□□□ -1.23
CKAP2-201ENST00000258607 TEPPQ6URK8 271 aa7.38□□□□□ -1.23
CKAP2-201ENST00000258607 TMEM14EPQ6UXP3 125 aa7.38□□□□□ -1.23
CKAP2-201ENST00000258607 SLC35E3Q7Z769 313 aa7.38□□□□□ -1.23
CKAP2-201ENST00000258607 C1QL4Q86Z23 238 aa7.38□□□□□ -1.23
CKAP2-201ENST00000258607 OR4X1Q8NH49 305 aa7.38□□□□□ -1.23
CKAP2-201ENST00000258607 IGKV1OR2-108A0A075B7D4 117 aa7.37□□□□□ -1.23
CKAP2-201ENST00000258607 TRBV6-6A0A0A6YYG2 114 aa7.37□□□□□ -1.23
CKAP2-201ENST00000258607 GRIFINA4D1Z8 144 aa7.37□□□□□ -1.23
CKAP2-201ENST00000258607 CGB1A6NKQ9 187 aa7.37□□□□□ -1.23
CKAP2-201ENST00000258607 C17orf112F2Z3M2 114 aa7.37□□□□□ -1.23
CKAP2-201ENST00000258607 IFNA1P01562 189 aa7.37□□□□□ -1.23
CKAP2-201ENST00000258607 FRMD6-AS1P0C7T7 363 aa7.37□□□□□ -1.23
CKAP2-201ENST00000258607 CA7P43166 264 aa7.37□□□□□ -1.23
CKAP2-201ENST00000258607 Q6ZS49 121 aa7.37□□□□□ -1.23
CKAP2-201ENST00000258607 CIB3Q96Q77 187 aaPredicted RBP7.37□□□□□ -1.23
CKAP2-201ENST00000258607 BPESC1Q9GZL8 116 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms