RNA–Protein interactions for RNA: ENST00000257604.9

TRAFD1-201, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene TRAFD1, Length 3,178 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-201ENST00000257604 IMMP2LQ96T52 175 aa12□□□□□ -0.49
TRAFD1-201ENST00000257604 WDR61Q9GZS3 305 aaKnown RBP12□□□□□ -0.49
TRAFD1-201ENST00000257604 HIPK2Q9H2X6 1198 aa12□□□□□ -0.49
TRAFD1-201ENST00000257604 SLC35D1Q9NTN3 355 aa12□□□□□ -0.49
TRAFD1-201ENST00000257604 IDI2-AS1Q9NZ38 188 aa12□□□□□ -0.49
TRAFD1-201ENST00000257604 HSPB7Q9UBY9 170 aa12□□□□□ -0.49
TRAFD1-201ENST00000257604 RAI1Q7Z5J4 1906 aaPredicted RBP12□□□□□ -0.49
TRAFD1-201ENST00000257604 YPEL1O60688 119 aa12□□□□□ -0.49
TRAFD1-201ENST00000257604 CHRNB4P30926 498 aa12□□□□□ -0.49
TRAFD1-201ENST00000257604 MLANAQ16655 118 aa12□□□□□ -0.49
TRAFD1-201ENST00000257604 TDRG1Q3Y452 100 aa12□□□□□ -0.49
TRAFD1-201ENST00000257604 ASPHD1Q5U4P2 390 aa12□□□□□ -0.49
TRAFD1-201ENST00000257604 TMEM200BQ69YZ2 307 aa12□□□□□ -0.49
TRAFD1-201ENST00000257604 YPEL2Q96QA6 119 aa12□□□□□ -0.49
TRAFD1-201ENST00000257604 CELSR1Q9NYQ6 3014 aa11.99□□□□□ -0.49
TRAFD1-201ENST00000257604 SHISA9B4DS77 424 aa11.99□□□□□ -0.49
TRAFD1-201ENST00000257604 ACTL6BO94805 426 aa11.99□□□□□ -0.49
TRAFD1-201ENST00000257604 PINX1Q96BK5 328 aaKnown RBP11.99□□□□□ -0.49
TRAFD1-201ENST00000257604 IGHV1-69-2A0A0G2JMI3 117 aa11.99□□□□□ -0.49
TRAFD1-201ENST00000257604 ZNF320A2RRD8 509 aa11.99□□□□□ -0.49
TRAFD1-201ENST00000257604 PAX5Q02548 391 aa11.99□□□□□ -0.49
TRAFD1-201ENST00000257604 LRRC10Q5BKY1 277 aa11.99□□□□□ -0.49
TRAFD1-201ENST00000257604 OR4A47Q6IF82 309 aa11.99□□□□□ -0.49
TRAFD1-201ENST00000257604 OR10W1Q8NGF6 305 aa11.99□□□□□ -0.49
TRAFD1-201ENST00000257604 OR10G9Q8NGN4 311 aa11.99□□□□□ -0.49
TRAFD1-201ENST00000257604 OR10G7Q8NGN6 311 aa11.99□□□□□ -0.49
TRAFD1-201ENST00000257604 ZNF714Q96N38 554 aa11.99□□□□□ -0.49
TRAFD1-201ENST00000257604 C2orf88Q9BSF0 95 aa11.99□□□□□ -0.49
TRAFD1-201ENST00000257604 NDUFAF3Q9BU61 184 aa11.99□□□□□ -0.49
TRAFD1-201ENST00000257604 MRPL20Q9BYC9 149 aaKnown RBP11.99□□□□□ -0.49
TRAFD1-201ENST00000257604 IGHV3-21A0A0B4J1V1 117 aa11.98□□□□□ -0.49
TRAFD1-201ENST00000257604 TMEM178BH3BS89 294 aa11.98□□□□□ -0.49
TRAFD1-201ENST00000257604 IFNA1P01562 189 aa11.98□□□□□ -0.49
TRAFD1-201ENST00000257604 C10orf55Q5SWW7 151 aa11.98□□□□□ -0.49
TRAFD1-201ENST00000257604 TRAT1Q6PIZ9 186 aa11.98□□□□□ -0.49
TRAFD1-201ENST00000257604 VKORC1Q9BQB6 163 aa11.98□□□□□ -0.49
TRAFD1-201ENST00000257604 PRSS47A8MTI9 375 aa11.98□□□□□ -0.49
TRAFD1-201ENST00000257604 GATA2P23769 480 aaPredicted RBP11.98□□□□□ -0.49
TRAFD1-201ENST00000257604 PSMB3P49720 205 aa11.98□□□□□ -0.49
TRAFD1-201ENST00000257604 OR4S2Q8NH73 311 aa11.98□□□□□ -0.49
TRAFD1-201ENST00000257604 CTSZQ9UBR2 303 aa11.98□□□□□ -0.49
TRAFD1-201ENST00000257604 SRRM4A7MD48 611 aaKnown RBP11.98□□□□□ -0.49
TRAFD1-201ENST00000257604 KBTBD11O94819 623 aa11.98□□□□□ -0.49
TRAFD1-201ENST00000257604 REG1AP05451 166 aa11.98□□□□□ -0.49
TRAFD1-201ENST00000257604 SLC25A6P12236 298 aa11.98□□□□□ -0.49
TRAFD1-201ENST00000257604 COTL1Q14019 142 aa11.98□□□□□ -0.49
TRAFD1-201ENST00000257604 PDLIM3Q53GG5 364 aaPredicted RBP11.98□□□□□ -0.49
TRAFD1-201ENST00000257604 CYP2G1PQ6ZSU1 146 aa11.98□□□□□ -0.49
TRAFD1-201ENST00000257604 SNHG12Q9BXW3 62 aa11.98□□□□□ -0.49
TRAFD1-201ENST00000257604 CTDSP1Q9GZU7 261 aa11.98□□□□□ -0.49
TRAFD1-201ENST00000257604 TCF19Q9Y242 345 aa11.98□□□□□ -0.49
TRAFD1-201ENST00000257604 TET2Q6N021 2002 aaPredicted RBP11.97□□□□□ -0.49
TRAFD1-201ENST00000257604 CD24P25063 80 aa11.97□□□□□ -0.49
TRAFD1-201ENST00000257604 MS4A5Q9H3V2 200 aa11.97□□□□□ -0.49
TRAFD1-201ENST00000257604 FCN3O75636 299 aa11.97□□□□□ -0.49
TRAFD1-201ENST00000257604 GNB1P62873 340 aa11.97□□□□□ -0.49
TRAFD1-201ENST00000257604 MIC13Q5XKP0 118 aa11.97□□□□□ -0.49
TRAFD1-201ENST00000257604 NUP37Q8NFH4 326 aa11.97□□□□□ -0.49
TRAFD1-201ENST00000257604 OR2T10Q8NGZ9 312 aa11.97□□□□□ -0.49
TRAFD1-201ENST00000257604 HARBI1Q96MB7 349 aa11.97□□□□□ -0.49
TRAFD1-201ENST00000257604 P2RX4Q99571 388 aa11.97□□□□□ -0.49
TRAFD1-201ENST00000257604 USP9XQ93008 2570 aaPredicted RBP11.97□□□□□ -0.49
TRAFD1-201ENST00000257604 FRMD6-AS1P0C7T7 363 aa11.96□□□□□ -0.49
TRAFD1-201ENST00000257604 CFHR2P36980 270 aa11.96□□□□□ -0.49
TRAFD1-201ENST00000257604 GATA4P43694 442 aa11.96□□□□□ -0.49
TRAFD1-201ENST00000257604 ATP5G3P48201 142 aa11.96□□□□□ -0.49
TRAFD1-201ENST00000257604 ZCCHC14Q8WYQ9 949 aaKnown RBP11.96□□□□□ -0.49
TRAFD1-201ENST00000257604 RAB24Q969Q5 203 aa11.96□□□□□ -0.49
TRAFD1-201ENST00000257604 CSPG4Q6UVK1 2322 aa11.96□□□□□ -0.49
TRAFD1-201ENST00000257604 F2RL2O00254 374 aa11.96□□□□□ -0.5
TRAFD1-201ENST00000257604 CD1BP29016 333 aa11.96□□□□□ -0.5
TRAFD1-201ENST00000257604 RAB7AP51149 207 aa11.96□□□□□ -0.5
TRAFD1-201ENST00000257604 SLC35B1P78383 322 aa11.96□□□□□ -0.5
TRAFD1-201ENST00000257604 SERF2P84101 59 aa11.96□□□□□ -0.5
TRAFD1-201ENST00000257604 KLRB1Q12918 225 aa11.96□□□□□ -0.5
TRAFD1-201ENST00000257604 DMRTA1Q5VZB9 504 aa11.96□□□□□ -0.5
TRAFD1-201ENST00000257604 TMEM14EPQ6UXP3 125 aa11.96□□□□□ -0.5
TRAFD1-201ENST00000257604 LHFPL4Q7Z7J7 247 aa11.96□□□□□ -0.5
TRAFD1-201ENST00000257604 ZNF114Q8NC26 417 aa11.96□□□□□ -0.5
TRAFD1-201ENST00000257604 FAM103A1Q9BTL3 118 aaKnown RBP11.96□□□□□ -0.5
TRAFD1-201ENST00000257604 TMEM147Q9BVK8 224 aa11.96□□□□□ -0.5
TRAFD1-201ENST00000257604 ACTR3CQ9C0K3 210 aaPredicted RBP11.96□□□□□ -0.5
TRAFD1-201ENST00000257604 C15orf62A8K5M9 175 aa11.95□□□□□ -0.5
TRAFD1-201ENST00000257604 TGOLN2O43493 480 aa11.95□□□□□ -0.5
TRAFD1-201ENST00000257604 HRASP01112 189 aa11.95□□□□□ -0.5
TRAFD1-201ENST00000257604 APOBEC3AP31941 199 aaPredicted RBP11.95□□□□□ -0.5
TRAFD1-201ENST00000257604 NUTF2P61970 127 aaKnown RBP11.95□□□□□ -0.5
TRAFD1-201ENST00000257604 PAM16Q9Y3D7 125 aa11.95□□□□□ -0.5
TRAFD1-201ENST00000257604 PIGBOS1A0A0B4J2F0 54 aa11.95□□□□□ -0.5
TRAFD1-201ENST00000257604 A0A1W2PPV4 95 aa11.95□□□□□ -0.5
TRAFD1-201ENST00000257604 J3QR06 171 aa11.95□□□□□ -0.5
TRAFD1-201ENST00000257604 WNT2P09544 360 aa11.95□□□□□ -0.5
TRAFD1-201ENST00000257604 CT45A6P0DMU7 189 aa11.95□□□□□ -0.5
TRAFD1-201ENST00000257604 CT45A5P0DMU8 189 aa11.95□□□□□ -0.5
TRAFD1-201ENST00000257604 CT45A7P0DMV0 189 aa11.95□□□□□ -0.5
TRAFD1-201ENST00000257604 TFPI2P48307 235 aa11.95□□□□□ -0.5
TRAFD1-201ENST00000257604 EIF4EBP1Q13541 118 aaPredicted RBP11.95□□□□□ -0.5
TRAFD1-201ENST00000257604 RNF151Q2KHN1 245 aa11.95□□□□□ -0.5
TRAFD1-201ENST00000257604 PSMG3Q9BT73 122 aaPredicted RBP11.95□□□□□ -0.5
TRAFD1-201ENST00000257604 ONECUT1Q9UBC0 465 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms