RNA–Protein interactions for RNA: ENST00000255465.6

CCNA1-201, Transcript of cyclin A1, humanhuman

TSL 1 (best) BASIC

Gene CCNA1, Length 1,879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1-201ENST00000255465 NTF3P20783 257 aa9.86□□□□□ -0.83
CCNA1-201ENST00000255465 NPPCP23582 126 aa9.86□□□□□ -0.83
CCNA1-201ENST00000255465 SRIP30626 198 aa9.86□□□□□ -0.83
CCNA1-201ENST00000255465 PTGER1P34995 402 aa9.86□□□□□ -0.83
CCNA1-201ENST00000255465 MEF2CQ06413 473 aaPredicted RBP9.86□□□□□ -0.83
CCNA1-201ENST00000255465 KLRB1Q12918 225 aa9.86□□□□□ -0.83
CCNA1-201ENST00000255465 MYBPHQ13203 477 aa9.86□□□□□ -0.83
CCNA1-201ENST00000255465 OR8B8Q15620 311 aa9.86□□□□□ -0.83
CCNA1-201ENST00000255465 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.86□□□□□ -0.83
CCNA1-201ENST00000255465 KIAA1644Q3SXP7 199 aa9.86□□□□□ -0.83
CCNA1-201ENST00000255465 CXorf66Q5JRM2 361 aaPredicted RBP9.86□□□□□ -0.83
CCNA1-201ENST00000255465 SPATA31B1PQ5VZV4 182 aa9.86□□□□□ -0.83
CCNA1-201ENST00000255465 HLA-DQA1Q5Y7H0 255 aa9.86□□□□□ -0.83
CCNA1-201ENST00000255465 MMD2Q8IY49 270 aa9.86□□□□□ -0.83
CCNA1-201ENST00000255465 ZADH2Q8N4Q0 377 aa9.86□□□□□ -0.83
CCNA1-201ENST00000255465 TMEM251Q8N6I4 163 aa9.86□□□□□ -0.83
CCNA1-201ENST00000255465 TPRX1Q8N7U7 411 aa9.86□□□□□ -0.83
CCNA1-201ENST00000255465 SSC4DQ8WTU2 575 aa9.86□□□□□ -0.83
CCNA1-201ENST00000255465 PTH2Q96A98 100 aa9.86□□□□□ -0.83
CCNA1-201ENST00000255465 APOBEC3DQ96AK3 386 aaPredicted RBP9.86□□□□□ -0.83
CCNA1-201ENST00000255465 DEFB126Q9BYW3 111 aa9.86□□□□□ -0.83
CCNA1-201ENST00000255465 TXNIPQ9H3M7 391 aa9.86□□□□□ -0.83
CCNA1-201ENST00000255465 ARL2-SNX15V9GYD0 113 aa9.86□□□□□ -0.83
CCNA1-201ENST00000255465 HRKO00198 91 aa9.85□□□□□ -0.83
CCNA1-201ENST00000255465 ANGPTL7O43827 346 aa9.85□□□□□ -0.83
CCNA1-201ENST00000255465 COX5AP20674 150 aa9.85□□□□□ -0.83
CCNA1-201ENST00000255465 KIR3DS1Q14943 382 aa9.85□□□□□ -0.83
CCNA1-201ENST00000255465 C2orf91Q6ZV80 131 aa9.85□□□□□ -0.83
CCNA1-201ENST00000255465 RPS19BP1Q86WX3 136 aaKnown RBP9.85□□□□□ -0.83
CCNA1-201ENST00000255465 TMEM54Q969K7 222 aa9.85□□□□□ -0.83
CCNA1-201ENST00000255465 ADAT3Q96EY9 351 aaPredicted RBP9.85□□□□□ -0.83
CCNA1-201ENST00000255465 C1QTNF4Q9BXJ3 329 aa9.85□□□□□ -0.83
CCNA1-201ENST00000255465 SERTAD4Q9NUC0 356 aa9.85□□□□□ -0.83
CCNA1-201ENST00000255465 RABAC1Q9UI14 185 aa9.85□□□□□ -0.83
CCNA1-201ENST00000255465 EXPH5Q8NEV8 1989 aa9.85□□□□□ -0.83
CCNA1-201ENST00000255465 SYS1-DBNDD2H3BUS1 97 aa9.85□□□□□ -0.83
CCNA1-201ENST00000255465 PRKNO60260 465 aaPredicted RBP9.85□□□□□ -0.83
CCNA1-201ENST00000255465 ZFAND5O76080 213 aa9.85□□□□□ -0.83
CCNA1-201ENST00000255465 NKX2-2O95096 273 aa9.85□□□□□ -0.83
CCNA1-201ENST00000255465 IGKV3-11P04433 115 aa9.85□□□□□ -0.83
CCNA1-201ENST00000255465 CT62P0C5K7 136 aa9.85□□□□□ -0.83
CCNA1-201ENST00000255465 HERV-K104P61576 105 aa9.85□□□□□ -0.83
CCNA1-201ENST00000255465 OR5AS1Q8N127 324 aa9.85□□□□□ -0.83
CCNA1-201ENST00000255465 OR4C3Q8NH37 302 aa9.85□□□□□ -0.83
CCNA1-201ENST00000255465 SPAG8Q99932 426 aaPredicted RBP9.85□□□□□ -0.83
CCNA1-201ENST00000255465 RTN4RQ9BZR6 473 aa9.85□□□□□ -0.83
CCNA1-201ENST00000255465 CLCF1Q9UBD9 225 aa9.85□□□□□ -0.83
CCNA1-201ENST00000255465 PRSS37A4D1T9 235 aa9.84□□□□□ -0.83
CCNA1-201ENST00000255465 ZNF850A8MQ14 1090 aa9.84□□□□□ -0.83
CCNA1-201ENST00000255465 APCSP02743 223 aa9.84□□□□□ -0.83
CCNA1-201ENST00000255465 RPL18Q07020 188 aaKnown RBP9.84□□□□□ -0.83
CCNA1-201ENST00000255465 PDCD1Q15116 288 aa9.84□□□□□ -0.83
CCNA1-201ENST00000255465 POU2AF1Q16633 256 aa9.84□□□□□ -0.83
CCNA1-201ENST00000255465 SAMD5Q5TGI4 173 aa9.84□□□□□ -0.83
CCNA1-201ENST00000255465 ZNF645Q8N7E2 425 aa9.84□□□□□ -0.83
CCNA1-201ENST00000255465 OR5D13Q8NGL4 314 aa9.84□□□□□ -0.83
CCNA1-201ENST00000255465 C8orf46Q8TAG6 207 aa9.84□□□□□ -0.83
CCNA1-201ENST00000255465 CHCHD1Q96BP2 118 aaKnown RBP9.84□□□□□ -0.83
CCNA1-201ENST00000255465 TPPP3Q9BW30 176 aa9.84□□□□□ -0.83
CCNA1-201ENST00000255465 LINC00312Q9Y6C7 94 aa9.84□□□□□ -0.83
CCNA1-201ENST00000255465 IGKV1D-42A0A075B6H8 117 aa9.83□□□□□ -0.84
CCNA1-201ENST00000255465 A0A087X0K7 114 aa9.83□□□□□ -0.84
CCNA1-201ENST00000255465 RER1O15258 196 aa9.83□□□□□ -0.84
CCNA1-201ENST00000255465 SLC16A7O60669 478 aa9.83□□□□□ -0.84
CCNA1-201ENST00000255465 HLA-DOBP13765 273 aa9.83□□□□□ -0.84
CCNA1-201ENST00000255465 ID1P41134 155 aa9.83□□□□□ -0.84
CCNA1-201ENST00000255465 MGAT2Q10469 447 aa9.83□□□□□ -0.84
CCNA1-201ENST00000255465 FUT7Q11130 342 aa9.83□□□□□ -0.84
CCNA1-201ENST00000255465 PHLDA2Q53GA4 152 aa9.83□□□□□ -0.84
CCNA1-201ENST00000255465 PSMG4Q5JS54 123 aa9.83□□□□□ -0.84
CCNA1-201ENST00000255465 SLC35E4Q6ICL7 350 aa9.83□□□□□ -0.84
CCNA1-201ENST00000255465 C16orf47Q6ZP98 133 aaPredicted RBP9.83□□□□□ -0.84
CCNA1-201ENST00000255465 FAM19A2Q8N3H0 131 aa9.83□□□□□ -0.84
CCNA1-201ENST00000255465 Q8NA96 180 aa9.83□□□□□ -0.84
CCNA1-201ENST00000255465 ZBTB34Q8NCN2 500 aa9.83□□□□□ -0.84
CCNA1-201ENST00000255465 OR10G7Q8NGN6 311 aa9.83□□□□□ -0.84
CCNA1-201ENST00000255465 OR1L1Q8NH94 360 aa9.83□□□□□ -0.84
CCNA1-201ENST00000255465 OSTCQ9NRP0 149 aa9.83□□□□□ -0.84
CCNA1-201ENST00000255465 SHANK1Q9Y566 2161 aa9.83□□□□□ -0.84
CCNA1-201ENST00000255465 KBTBD11-OT1A0A1B0GTJ5 212 aa9.83□□□□□ -0.84
CCNA1-201ENST00000255465 A4D1N5 150 aa9.83□□□□□ -0.84
CCNA1-201ENST00000255465 GAGE12JA6NER3 117 aa9.83□□□□□ -0.84
CCNA1-201ENST00000255465 B5MCH6 92 aa9.83□□□□□ -0.84
CCNA1-201ENST00000255465 LMX1BO60663 402 aa9.83□□□□□ -0.84
CCNA1-201ENST00000255465 OR2J3O76001 311 aa9.83□□□□□ -0.84
CCNA1-201ENST00000255465 GAGE7O76087 117 aa9.83□□□□□ -0.84
CCNA1-201ENST00000255465 NDUFB4O95168 129 aa9.83□□□□□ -0.84
CCNA1-201ENST00000255465 IGHMP01871 453 aa9.83□□□□□ -0.84
CCNA1-201ENST00000255465 CLPSP04118 112 aa9.83□□□□□ -0.84
CCNA1-201ENST00000255465 GAGE12FP0CL80 117 aa9.83□□□□□ -0.84
CCNA1-201ENST00000255465 GAGE12GP0CL81 117 aa9.83□□□□□ -0.84
CCNA1-201ENST00000255465 GAGE12IP0CL82 117 aa9.83□□□□□ -0.84
CCNA1-201ENST00000255465 GATA3P23771 443 aa9.83□□□□□ -0.84
CCNA1-201ENST00000255465 KIR2DS4P43632 304 aa9.83□□□□□ -0.84
CCNA1-201ENST00000255465 EMDP50402 254 aa9.83□□□□□ -0.84
CCNA1-201ENST00000255465 GNG3P63215 75 aa9.83□□□□□ -0.84
CCNA1-201ENST00000255465 GAGE4Q13068 117 aa9.83□□□□□ -0.84
CCNA1-201ENST00000255465 OR1F12Q8NHA8 337 aa9.83□□□□□ -0.84
CCNA1-201ENST00000255465 TMEM126AQ9H061 195 aa9.83□□□□□ -0.84
CCNA1-201ENST00000255465 GCM1Q9NP62 436 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms