RNA–Protein interactions for RNA: ENST00000254667.7

PTPRE-201, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRE, Length 5,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-201ENST00000254667 MESP1Q9BRJ9 268 aa15.85■□□□□ 0.13
PTPRE-201ENST00000254667 SOX21Q9Y651 276 aaPredicted RBP15.85■□□□□ 0.13
PTPRE-201ENST00000254667 IGHV1-46P01743 117 aa15.85■□□□□ 0.13
PTPRE-201ENST00000254667 CD69Q07108 199 aa15.85■□□□□ 0.13
PTPRE-201ENST00000254667 CACNA1EQ15878 2313 aa15.85■□□□□ 0.13
PTPRE-201ENST00000254667 CEACAM4O75871 244 aa15.85■□□□□ 0.13
PTPRE-201ENST00000254667 IGKV1D-13A0A0B4J2D9 117 aa15.85■□□□□ 0.13
PTPRE-201ENST00000254667 IGKV1-13P0DP09 117 aa15.85■□□□□ 0.13
PTPRE-201ENST00000254667 PVRIGQ6DKI7 326 aa15.85■□□□□ 0.13
PTPRE-201ENST00000254667 DICER1Q9UPY3 1922 aaKnown RBP15.84■□□□□ 0.13
PTPRE-201ENST00000254667 IGHV3-23P01764 117 aa15.84■□□□□ 0.13
PTPRE-201ENST00000254667 ASIPP42127 132 aa15.84■□□□□ 0.13
PTPRE-201ENST00000254667 COL5A1-AS1Q5SY13 56 aa15.84■□□□□ 0.13
PTPRE-201ENST00000254667 Q6AWC8 147 aa15.84■□□□□ 0.13
PTPRE-201ENST00000254667 A0A1B0GW15 77 aa15.84■□□□□ 0.13
PTPRE-201ENST00000254667 PEMTQ9UBM1 199 aa15.84■□□□□ 0.13
PTPRE-201ENST00000254667 MOB4Q9Y3A3 225 aa15.84■□□□□ 0.13
PTPRE-201ENST00000254667 IGHV3OR16-13A0A075B7E8 117 aa15.84■□□□□ 0.13
PTPRE-201ENST00000254667 IGHV3-74A0A0B4J1X5 117 aa15.84■□□□□ 0.13
PTPRE-201ENST00000254667 RNF222A6NCQ9 220 aa15.84■□□□□ 0.13
PTPRE-201ENST00000254667 CLPSP04118 112 aa15.84■□□□□ 0.13
PTPRE-201ENST00000254667 DSCR9P59020 149 aa15.84■□□□□ 0.13
PTPRE-201ENST00000254667 TAS2R60P59551 318 aa15.84■□□□□ 0.13
PTPRE-201ENST00000254667 SPATA45Q537H7 98 aa15.84■□□□□ 0.13
PTPRE-201ENST00000254667 C12orf54Q6X4T0 127 aa15.84■□□□□ 0.13
PTPRE-201ENST00000254667 CARHSP1Q9Y2V2 147 aaKnown RBP15.84■□□□□ 0.13
PTPRE-201ENST00000254667 PAQR4Q8N4S7 273 aaPredicted RBP15.84■□□□□ 0.13
PTPRE-201ENST00000254667 FGFBP3Q8TAT2 258 aa15.84■□□□□ 0.13
PTPRE-201ENST00000254667 CIARTQ8N365 385 aaPredicted RBP15.83■□□□□ 0.13
PTPRE-201ENST00000254667 JMJD8Q96S16 334 aa15.83■□□□□ 0.13
PTPRE-201ENST00000254667 TRBV20OR9-2A0A075B6H5 130 aa15.83■□□□□ 0.12
PTPRE-201ENST00000254667 MYOD1P15172 320 aa15.83■□□□□ 0.12
PTPRE-201ENST00000254667 FAM74A4Q5TZK3 123 aa15.83■□□□□ 0.12
PTPRE-201ENST00000254667 CLEC19AQ6UXS0 136 aa15.83■□□□□ 0.12
PTPRE-201ENST00000254667 IL36BQ9NZH7 164 aa15.83■□□□□ 0.12
PTPRE-201ENST00000254667 SRRM5B3KS81 715 aa15.83■□□□□ 0.12
PTPRE-201ENST00000254667 ZNF324BQ6AW86 544 aaPredicted RBP15.83■□□□□ 0.12
PTPRE-201ENST00000254667 LGALS3P17931 250 aaKnown RBP15.82■□□□□ 0.12
PTPRE-201ENST00000254667 FOXF2Q12947 444 aa15.82■□□□□ 0.12
PTPRE-201ENST00000254667 MDS2Q8NDY4 140 aa15.82■□□□□ 0.12
PTPRE-201ENST00000254667 TRAV9-1A0A075B6T8 112 aa15.82■□□□□ 0.12
PTPRE-201ENST00000254667 ZNF207O43670 478 aaKnown RBP15.82■□□□□ 0.12
PTPRE-201ENST00000254667 CIRBPQ14011 172 aaKnown RBP15.82■□□□□ 0.12
PTPRE-201ENST00000254667 COLCA1Q6ZS62 124 aa15.82■□□□□ 0.12
PTPRE-201ENST00000254667 PRSS22Q9GZN4 317 aa15.82■□□□□ 0.12
PTPRE-201ENST00000254667 UQCR10Q9UDW1 63 aa15.82■□□□□ 0.12
PTPRE-201ENST00000254667 SRP19P09132 144 aaKnown RBP15.82■□□□□ 0.12
PTPRE-201ENST00000254667 BTCP35070 178 aa15.82■□□□□ 0.12
PTPRE-201ENST00000254667 CDX1P47902 265 aaPredicted RBP15.82■□□□□ 0.12
PTPRE-201ENST00000254667 GAS1P54826 345 aa15.82■□□□□ 0.12
PTPRE-201ENST00000254667 TRAV14DV4A0A0A6YYC5 116 aa15.81■□□□□ 0.12
PTPRE-201ENST00000254667 EGR1P18146 543 aa15.81■□□□□ 0.12
PTPRE-201ENST00000254667 LRTM2Q8N967 370 aa15.81■□□□□ 0.12
PTPRE-201ENST00000254667 A0A0B4J293 547 aa15.81■□□□□ 0.12
PTPRE-201ENST00000254667 NPFFO15130 113 aa15.81■□□□□ 0.12
PTPRE-201ENST00000254667 PAX1P15863 534 aa15.81■□□□□ 0.12
PTPRE-201ENST00000254667 ZNF25P17030 456 aaPredicted RBP15.81■□□□□ 0.12
PTPRE-201ENST00000254667 DUTP33316 252 aaKnown RBP15.81■□□□□ 0.12
PTPRE-201ENST00000254667 BMPERQ8N8U9 685 aa15.81■□□□□ 0.12
PTPRE-201ENST00000254667 S4R3C0 116 aa15.81■□□□□ 0.12
PTPRE-201ENST00000254667 SLC50A1Q9BRV3 221 aa15.81■□□□□ 0.12
PTPRE-201ENST00000254667 OTORQ9NRC9 128 aa15.81■□□□□ 0.12
PTPRE-201ENST00000254667 YAE1D1Q9NRH1 226 aa15.81■□□□□ 0.12
PTPRE-201ENST00000254667 ALPK2Q86TB3 2170 aa15.8■□□□□ 0.12
PTPRE-201ENST00000254667 PRCDQ00LT1 54 aa15.8■□□□□ 0.12
PTPRE-201ENST00000254667 Q0VFX4 171 aa15.8■□□□□ 0.12
PTPRE-201ENST00000254667 KIAA1644Q3SXP7 199 aa15.8■□□□□ 0.12
PTPRE-201ENST00000254667 OR4D5Q8NGN0 318 aa15.8■□□□□ 0.12
PTPRE-201ENST00000254667 IGKV3-20P01619 116 aa15.8■□□□□ 0.12
PTPRE-201ENST00000254667 PRSS8Q16651 343 aa15.8■□□□□ 0.12
PTPRE-201ENST00000254667 IGHV3-49A0A0A0MS15 119 aa15.8■□□□□ 0.12
PTPRE-201ENST00000254667 SLC25A34Q6PIV7 304 aa15.8■□□□□ 0.12
PTPRE-201ENST00000254667 MIR17HGQ75NE6 70 aa15.8■□□□□ 0.12
PTPRE-201ENST00000254667 THSD7BQ9C0I4 1608 aa15.8■□□□□ 0.12
PTPRE-201ENST00000254667 ID3Q02535 119 aa15.79■□□□□ 0.12
PTPRE-201ENST00000254667 RPP21Q9H633 154 aaKnown RBP15.79■□□□□ 0.12
PTPRE-201ENST00000254667 A0A1B0GUT8 65 aa15.79■□□□□ 0.12
PTPRE-201ENST00000254667 LY6DQ14210 128 aa15.79■□□□□ 0.12
PTPRE-201ENST00000254667 GEMIN7Q9H840 131 aaKnown RBP15.79■□□□□ 0.12
PTPRE-201ENST00000254667 ZMAT5Q9UDW3 170 aaKnown RBP15.79■□□□□ 0.12
PTPRE-201ENST00000254667 A0A0A6YYD4 124 aa15.79■□□□□ 0.12
PTPRE-201ENST00000254667 IGHV3-66A0A0C4DH42 116 aa15.79■□□□□ 0.12
PTPRE-201ENST00000254667 H3BVH4 76 aa15.79■□□□□ 0.12
PTPRE-201ENST00000254667 Q9H3A6 140 aa15.79■□□□□ 0.12
PTPRE-201ENST00000254667 SCO2A0A1W2PP80 73 aa15.79■□□□□ 0.12
PTPRE-201ENST00000254667 GFI1Q99684 422 aa15.79■□□□□ 0.12
PTPRE-201ENST00000254667 PMCHL2Q9BQD1 86 aa15.79■□□□□ 0.12
PTPRE-201ENST00000254667 RPUSD1Q9UJJ7 312 aaKnown RBP15.79■□□□□ 0.12
PTPRE-201ENST00000254667 SLC25A15Q9Y619 301 aa15.79■□□□□ 0.12
PTPRE-201ENST00000254667 SBF1O95248 1867 aa15.79■□□□□ 0.12
PTPRE-201ENST00000254667 A0A087WV48 116 aa15.78■□□□□ 0.12
PTPRE-201ENST00000254667 RNF126Q9BV68 326 aa15.78■□□□□ 0.12
PTPRE-201ENST00000254667 TUBA4BQ9H853 241 aa15.78■□□□□ 0.12
PTPRE-201ENST00000254667 ADIPOQQ15848 244 aa15.78■□□□□ 0.12
PTPRE-201ENST00000254667 ZNF385CQ66K41 422 aaPredicted RBP15.78■□□□□ 0.12
PTPRE-201ENST00000254667 ZNF600Q6ZNG1 722 aa15.78■□□□□ 0.12
PTPRE-201ENST00000254667 IGKV1-12A0A0C4DH73 117 aa15.78■□□□□ 0.12
PTPRE-201ENST00000254667 IGKV1D-12P01611 117 aa15.78■□□□□ 0.12
PTPRE-201ENST00000254667 VDAC2P45880 294 aaPredicted RBP15.78■□□□□ 0.12
PTPRE-201ENST00000254667 A0A087WWC5 75 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms