RNA–Protein interactions for RNA: ENST00000250495.9

NEDD8-201, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD8, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-201ENST00000250495 LOC102724200A0A096LPH7 203 aaPredicted RBP15.76■□□□□ 0.11
NEDD8-201ENST00000250495 MARCH11A6NNE9 402 aa15.76■□□□□ 0.11
NEDD8-201ENST00000250495 TGOLN2O43493 480 aa15.76■□□□□ 0.11
NEDD8-201ENST00000250495 PGLYRP1O75594 196 aaPredicted RBP15.76■□□□□ 0.11
NEDD8-201ENST00000250495 RPA2P15927 270 aa15.76■□□□□ 0.11
NEDD8-201ENST00000250495 TAS2R46P59540 309 aa15.76■□□□□ 0.11
NEDD8-201ENST00000250495 TMEM69Q5SWH9 247 aa15.76■□□□□ 0.11
NEDD8-201ENST00000250495 CMTM1Q8IZ96 169 aa15.76■□□□□ 0.11
NEDD8-201ENST00000250495 CADM3Q8N126 398 aa15.76■□□□□ 0.11
NEDD8-201ENST00000250495 OR1L6Q8NGR2 347 aa15.76■□□□□ 0.11
NEDD8-201ENST00000250495 SDHCQ99643 169 aaPredicted RBP15.76■□□□□ 0.11
NEDD8-201ENST00000250495 ZNF436Q9C0F3 470 aaPredicted RBP15.76■□□□□ 0.11
NEDD8-201ENST00000250495 DNAH1Q9P2D7 4330 aa15.76■□□□□ 0.11
NEDD8-201ENST00000250495 IGHV3-35A0A0C4DH35 117 aa15.75■□□□□ 0.11
NEDD8-201ENST00000250495 PMP2P02689 132 aa15.75■□□□□ 0.11
NEDD8-201ENST00000250495 RLN1P04808 185 aa15.75■□□□□ 0.11
NEDD8-201ENST00000250495 LPAR6P43657 344 aa15.75■□□□□ 0.11
NEDD8-201ENST00000250495 SLC38A6Q8IZM9 456 aa15.75■□□□□ 0.11
NEDD8-201ENST00000250495 SAMD12Q8N8I0 201 aa15.75■□□□□ 0.11
NEDD8-201ENST00000250495 OR5H2Q8NGV7 314 aa15.75■□□□□ 0.11
NEDD8-201ENST00000250495 OR6F1Q8NGZ6 308 aa15.75■□□□□ 0.11
NEDD8-201ENST00000250495 DIRAS2Q96HU8 199 aa15.75■□□□□ 0.11
NEDD8-201ENST00000250495 SOSTQ9BQB4 213 aa15.75■□□□□ 0.11
NEDD8-201ENST00000250495 C5orf66Q9H5L9 145 aa15.75■□□□□ 0.11
NEDD8-201ENST00000250495 NDUFA4L2Q9NRX3 87 aa15.75■□□□□ 0.11
NEDD8-201ENST00000250495 ANAPC10Q9UM13 185 aa15.75■□□□□ 0.11
NEDD8-201ENST00000250495 FABP12A6NFH5 140 aa15.74■□□□□ 0.11
NEDD8-201ENST00000250495 SNAPC5O75971 98 aa15.74■□□□□ 0.11
NEDD8-201ENST00000250495 KRASP01116 189 aa15.74■□□□□ 0.11
NEDD8-201ENST00000250495 NAT1P18440 290 aa15.74■□□□□ 0.11
NEDD8-201ENST00000250495 PRSS3P35030 304 aa15.74■□□□□ 0.11
NEDD8-201ENST00000250495 TAS2R20P59543 309 aa15.74■□□□□ 0.11
NEDD8-201ENST00000250495 WT1-ASQ06250 92 aa15.74■□□□□ 0.11
NEDD8-201ENST00000250495 ZNF79Q15937 498 aa15.74■□□□□ 0.11
NEDD8-201ENST00000250495 OR2C3Q8N628 320 aa15.74■□□□□ 0.11
NEDD8-201ENST00000250495 LSM10Q969L4 123 aaKnown RBP15.74■□□□□ 0.11
NEDD8-201ENST00000250495 BSCL2Q96G97 398 aaPredicted RBP15.74■□□□□ 0.11
NEDD8-201ENST00000250495 ATP6V0BQ99437 205 aa15.74■□□□□ 0.11
NEDD8-201ENST00000250495 HINT2Q9BX68 163 aa15.74■□□□□ 0.11
NEDD8-201ENST00000250495 FKBP11Q9NYL4 201 aa15.74■□□□□ 0.11
NEDD8-201ENST00000250495 COMMD3Q9UBI1 195 aa15.74■□□□□ 0.11
NEDD8-201ENST00000250495 GPR31O00270 319 aa15.73■□□□□ 0.11
NEDD8-201ENST00000250495 LAMTOR1Q6IAA8 161 aa15.73■□□□□ 0.11
NEDD8-201ENST00000250495 SPSB3Q6PJ21 355 aa15.73■□□□□ 0.11
NEDD8-201ENST00000250495 SNX29P2Q8IUI4 249 aa15.73■□□□□ 0.11
NEDD8-201ENST00000250495 FCAMRQ8WWV6 532 aa15.73■□□□□ 0.11
NEDD8-201ENST00000250495 TMEM190Q8WZ59 177 aa15.73■□□□□ 0.11
NEDD8-201ENST00000250495 CMTM3Q96MX0 182 aa15.73■□□□□ 0.11
NEDD8-201ENST00000250495 OR51B2Q9Y5P1 312 aa15.73■□□□□ 0.11
NEDD8-201ENST00000250495 F11RQ9Y624 299 aaKnown RBP15.73■□□□□ 0.11
NEDD8-201ENST00000250495 OR2T8A6NH00 312 aa15.72■□□□□ 0.11
NEDD8-201ENST00000250495 PFDN1O60925 122 aa15.72■□□□□ 0.11
NEDD8-201ENST00000250495 TMEM56Q96MV1 263 aa15.72■□□□□ 0.11
NEDD8-201ENST00000250495 SPAG8Q99932 426 aaPredicted RBP15.72■□□□□ 0.11
NEDD8-201ENST00000250495 OVOL2Q9BRP0 275 aa15.72■□□□□ 0.11
NEDD8-201ENST00000250495 DAZ1Q9NQZ3 744 aaKnown RBP15.72■□□□□ 0.11
NEDD8-201ENST00000250495 C21orf62Q9NYP8 219 aa15.72■□□□□ 0.11
NEDD8-201ENST00000250495 PRNDQ9UKY0 176 aa15.72■□□□□ 0.11
NEDD8-201ENST00000250495 hCG_2014768A0A024R1R8 64 aa15.71■□□□□ 0.11
NEDD8-201ENST00000250495 NDUFA4O00483 81 aa15.71■□□□□ 0.11
NEDD8-201ENST00000250495 HPGDSO60760 199 aa15.71■□□□□ 0.11
NEDD8-201ENST00000250495 G6PCP35575 357 aa15.71■□□□□ 0.11
NEDD8-201ENST00000250495 LPCAT3Q6P1A2 487 aa15.71■□□□□ 0.11
NEDD8-201ENST00000250495 SCARB1Q8WTV0 552 aa15.71■□□□□ 0.11
NEDD8-201ENST00000250495 RABL2AQ9UBK7 228 aaPredicted RBP15.71■□□□□ 0.11
NEDD8-201ENST00000250495 RABL2BQ9UNT1 228 aa15.71■□□□□ 0.11
NEDD8-201ENST00000250495 NSG2Q9Y328 171 aa15.71■□□□□ 0.11
NEDD8-201ENST00000250495 TSPAN4O14817 238 aa15.7■□□□□ 0.1
NEDD8-201ENST00000250495 APOA1P02647 267 aa15.7■□□□□ 0.1
NEDD8-201ENST00000250495 IL7P13232 177 aa15.7■□□□□ 0.1
NEDD8-201ENST00000250495 S100GP29377 79 aa15.7■□□□□ 0.1
NEDD8-201ENST00000250495 OR5B3Q8NH48 314 aa15.7■□□□□ 0.1
NEDD8-201ENST00000250495 IGHV3-21A0A0B4J1V1 117 aa15.69■□□□□ 0.1
NEDD8-201ENST00000250495 K7EMT4 169 aa15.69■□□□□ 0.1
NEDD8-201ENST00000250495 HLA-DMAP28067 261 aa15.69■□□□□ 0.1
NEDD8-201ENST00000250495 HRH1P35367 487 aa15.69■□□□□ 0.1
NEDD8-201ENST00000250495 BCAP31P51572 246 aa15.69■□□□□ 0.1
NEDD8-201ENST00000250495 MFAP2P55001 183 aa15.69■□□□□ 0.1
NEDD8-201ENST00000250495 APOC4P55056 127 aa15.69■□□□□ 0.1
NEDD8-201ENST00000250495 TSPAN5P62079 268 aa15.69■□□□□ 0.1
NEDD8-201ENST00000250495 FXYD6Q9H0Q3 95 aa15.69■□□□□ 0.1
NEDD8-201ENST00000250495 FAM212BQ9NTI7 297 aaPredicted RBP15.69■□□□□ 0.1
NEDD8-201ENST00000250495 ASAH1Q13510 395 aa15.68■□□□□ 0.1
NEDD8-201ENST00000250495 Q56UQ5 140 aa15.68■□□□□ 0.1
NEDD8-201ENST00000250495 UBAC2Q8NBM4 344 aa15.68■□□□□ 0.1
NEDD8-201ENST00000250495 GPX8Q8TED1 209 aa15.68■□□□□ 0.1
NEDD8-201ENST00000250495 CHRDL1Q9BU40 450 aa15.68■□□□□ 0.1
NEDD8-201ENST00000250495 C20orf24Q9BUV8 137 aa15.68■□□□□ 0.1
NEDD8-201ENST00000250495 FAM25AB3EWG3 89 aa15.67■□□□□ 0.1
NEDD8-201ENST00000250495 FAM25CB3EWG5 89 aa15.67■□□□□ 0.1
NEDD8-201ENST00000250495 FAM25GB3EWG6 89 aa15.67■□□□□ 0.1
NEDD8-201ENST00000250495 K7EIM0 57 aa15.67■□□□□ 0.1
NEDD8-201ENST00000250495 UBE2CO00762 179 aa15.67■□□□□ 0.1
NEDD8-201ENST00000250495 ELK1P19419 428 aa15.67■□□□□ 0.1
NEDD8-201ENST00000250495 PHLDA2Q53GA4 152 aa15.67■□□□□ 0.1
NEDD8-201ENST00000250495 PYDC2Q56P42 97 aa15.67■□□□□ 0.1
NEDD8-201ENST00000250495 Q6ZWC4 215 aa15.67■□□□□ 0.1
NEDD8-201ENST00000250495 OR1P1Q8NH06 330 aa15.67■□□□□ 0.1
NEDD8-201ENST00000250495 TMEM14BQ9NUH8 114 aa15.67■□□□□ 0.1
NEDD8-201ENST00000250495 UBQLN2Q9UHD9 624 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms