RNA–Protein interactions for RNA: ENST00000248054.9

SIN3B-201, Transcript of SIN3 transcription regulator family member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SIN3B, Length 5,037 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-201ENST00000248054 PLXND1Q9Y4D7 1925 aa13.21□□□□□ -0.3
SIN3B-201ENST00000248054 SRRM5B3KS81 715 aa13.21□□□□□ -0.3
SIN3B-201ENST00000248054 MIC13Q5XKP0 118 aa13.21□□□□□ -0.3
SIN3B-201ENST00000248054 PCSK4Q6UW60 755 aa13.21□□□□□ -0.3
SIN3B-201ENST00000248054 COLCA1Q6ZS62 124 aa13.21□□□□□ -0.3
SIN3B-201ENST00000248054 DNM1P46Q6ZS02 220 aa13.2□□□□□ -0.3
SIN3B-201ENST00000248054 PRO3102Q9H379 93 aa13.2□□□□□ -0.3
SIN3B-201ENST00000248054 OR4A5Q8NH83 315 aa13.2□□□□□ -0.3
SIN3B-201ENST00000248054 ATXN7O15265 892 aaPredicted RBP13.2□□□□□ -0.3
SIN3B-201ENST00000248054 ZNF207O43670 478 aaKnown RBP13.2□□□□□ -0.3
SIN3B-201ENST00000248054 NCOR1O75376 2440 aa13.2□□□□□ -0.3
SIN3B-201ENST00000248054 EP300Q09472 2414 aaPredicted RBP13.2□□□□□ -0.3
SIN3B-201ENST00000248054 TMEM189A5PLL7 270 aa13.2□□□□□ -0.3
SIN3B-201ENST00000248054 NUP37Q8NFH4 326 aa13.2□□□□□ -0.3
SIN3B-201ENST00000248054 PMCHL2Q9BQD1 86 aa13.2□□□□□ -0.3
SIN3B-201ENST00000248054 MSRB2Q9Y3D2 182 aa13.2□□□□□ -0.3
SIN3B-201ENST00000248054 GRIFINA4D1Z8 144 aa13.19□□□□□ -0.3
SIN3B-201ENST00000248054 NAPSAO96009 420 aa13.19□□□□□ -0.3
SIN3B-201ENST00000248054 HOXA4Q00056 320 aaPredicted RBP13.19□□□□□ -0.3
SIN3B-201ENST00000248054 ZNF324BQ6AW86 544 aaPredicted RBP13.19□□□□□ -0.3
SIN3B-201ENST00000248054 FAM216BQ8N7L0 139 aa13.19□□□□□ -0.3
SIN3B-201ENST00000248054 NEU1Q99519 415 aa13.19□□□□□ -0.3
SIN3B-201ENST00000248054 FAM90A9PA6NNJ1 464 aa13.19□□□□□ -0.3
SIN3B-201ENST00000248054 GCSHP23434 173 aa13.19□□□□□ -0.3
SIN3B-201ENST00000248054 NBL1P41271 181 aa13.19□□□□□ -0.3
SIN3B-201ENST00000248054 C3orf36Q3SXR2 165 aa13.19□□□□□ -0.3
SIN3B-201ENST00000248054 SFRP2Q96HF1 295 aa13.19□□□□□ -0.3
SIN3B-201ENST00000248054 SCGB1D4Q6XE38 83 aa13.19□□□□□ -0.3
SIN3B-201ENST00000248054 CNOT1A5YKK6 2376 aaKnown RBP13.19□□□□□ -0.3
SIN3B-201ENST00000248054 ARL14EPLP0DKL9 152 aa13.19□□□□□ -0.3
SIN3B-201ENST00000248054 RAB9AP51151 201 aa13.19□□□□□ -0.3
SIN3B-201ENST00000248054 ICAM4Q14773 271 aa13.19□□□□□ -0.3
SIN3B-201ENST00000248054 SLC25A17O43808 307 aa13.18□□□□□ -0.3
SIN3B-201ENST00000248054 RCC1LQ96I51 464 aaKnown RBP13.18□□□□□ -0.3
SIN3B-201ENST00000248054 PRNTQ86SH4 94 aa13.18□□□□□ -0.3
SIN3B-201ENST00000248054 ID1P41134 155 aa13.18□□□□□ -0.3
SIN3B-201ENST00000248054 PSG9Q00887 426 aa13.18□□□□□ -0.3
SIN3B-201ENST00000248054 SMAGPQ0VAQ4 97 aa13.18□□□□□ -0.3
SIN3B-201ENST00000248054 TNFRSF19Q9NS68 423 aa13.18□□□□□ -0.3
SIN3B-201ENST00000248054 SNRNP200O75643 2136 aaKnown RBP13.18□□□□□ -0.3
SIN3B-201ENST00000248054 IGKV3-15P01624 115 aa13.18□□□□□ -0.3
SIN3B-201ENST00000248054 IGF2-ASQ6U949 168 aa13.18□□□□□ -0.3
SIN3B-201ENST00000248054 RPRMQ9NS64 109 aa13.18□□□□□ -0.3
SIN3B-201ENST00000248054 RPL39P5Q59GN2 51 aa13.17□□□□□ -0.3
SIN3B-201ENST00000248054 LEAP2Q969E1 77 aa13.17□□□□□ -0.3
SIN3B-201ENST00000248054 HILPDAQ9Y5L2 63 aa13.17□□□□□ -0.3
SIN3B-201ENST00000248054 IGKV1D-13A0A0B4J2D9 117 aa13.17□□□□□ -0.3
SIN3B-201ENST00000248054 C17orf98A8MV24 154 aa13.17□□□□□ -0.3
SIN3B-201ENST00000248054 IGKV1-13P0DP09 117 aa13.17□□□□□ -0.3
SIN3B-201ENST00000248054 RNFT1Q5M7Z0 435 aa13.17□□□□□ -0.3
SIN3B-201ENST00000248054 STPG3Q8N7X2 389 aa13.17□□□□□ -0.3
SIN3B-201ENST00000248054 OR8A1Q8NGG7 326 aa13.17□□□□□ -0.3
SIN3B-201ENST00000248054 OR51G1Q8NGK1 321 aa13.17□□□□□ -0.3
SIN3B-201ENST00000248054 ZNF524Q96C55 264 aa13.17□□□□□ -0.3
SIN3B-201ENST00000248054 KIAA1549LQ6ZVL6 1849 aa13.17□□□□□ -0.3
SIN3B-201ENST00000248054 TMEM238LA0A1B0GVL6 79 aa13.17□□□□□ -0.3
SIN3B-201ENST00000248054 A6NJY4 79 aa13.17□□□□□ -0.3
SIN3B-201ENST00000248054 LEPROTL1O95214 131 aa13.17□□□□□ -0.3
SIN3B-201ENST00000248054 IGHV1-46P01743 117 aa13.17□□□□□ -0.3
SIN3B-201ENST00000248054 GCHFRP30047 84 aa13.17□□□□□ -0.3
SIN3B-201ENST00000248054 C1orf194Q5T5A4 169 aa13.17□□□□□ -0.3
SIN3B-201ENST00000248054 WFDC1Q9HC57 220 aa13.17□□□□□ -0.3
SIN3B-201ENST00000248054 CLDND2Q8NHS1 167 aa13.17□□□□□ -0.3
SIN3B-201ENST00000248054 PROB1E7EW31 1015 aa13.16□□□□□ -0.3
SIN3B-201ENST00000248054 RPL24P83731 157 aaKnown RBP13.16□□□□□ -0.3
SIN3B-201ENST00000248054 PSMG4Q5JS54 123 aa13.16□□□□□ -0.3
SIN3B-201ENST00000248054 ERASQ7Z444 233 aa13.16□□□□□ -0.3
SIN3B-201ENST00000248054 IGKV1D-8A0A087WSZ0 117 aa13.16□□□□□ -0.3
SIN3B-201ENST00000248054 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.16□□□□□ -0.3
SIN3B-201ENST00000248054 DKK1O94907 266 aa13.16□□□□□ -0.3
SIN3B-201ENST00000248054 ARF6P62330 175 aa13.16□□□□□ -0.3
SIN3B-201ENST00000248054 MORN2Q502X0 79 aa13.16□□□□□ -0.3
SIN3B-201ENST00000248054 RBPMS2Q6ZRY4 209 aaKnown RBP13.16□□□□□ -0.3
SIN3B-201ENST00000248054 TMEM70Q9BUB7 260 aa13.16□□□□□ -0.3
SIN3B-201ENST00000248054 HSPB7Q9UBY9 170 aa13.16□□□□□ -0.3
SIN3B-201ENST00000248054 PGPA6NDG6 321 aa13.16□□□□□ -0.3
SIN3B-201ENST00000248054 IZUMO4Q1ZYL8 232 aa13.16□□□□□ -0.3
SIN3B-201ENST00000248054 HEATR5AQ86XA9 2040 aa13.16□□□□□ -0.3
SIN3B-201ENST00000248054 PNKDQ8N490 385 aa13.16□□□□□ -0.3
SIN3B-201ENST00000248054 NPCDR1Q9BY65 106 aa13.16□□□□□ -0.3
SIN3B-201ENST00000248054 SDF2L1Q9HCN8 221 aa13.16□□□□□ -0.3
SIN3B-201ENST00000248054 DPM3Q9P2X0 92 aa13.16□□□□□ -0.3
SIN3B-201ENST00000248054 IGHV3-72A0A0B4J1Y9 119 aa13.15□□□□□ -0.3
SIN3B-201ENST00000248054 C5orf63A6NC05 138 aa13.15□□□□□ -0.3
SIN3B-201ENST00000248054 NABP2Q9BQ15 211 aa13.15□□□□□ -0.3
SIN3B-201ENST00000248054 ZNF137PP52743 207 aa13.15□□□□□ -0.3
SIN3B-201ENST00000248054 TNFRSF14Q92956 283 aa13.15□□□□□ -0.3
SIN3B-201ENST00000248054 SSBP3Q9BWW4 388 aaPredicted RBP13.15□□□□□ -0.3
SIN3B-201ENST00000248054 SOX21Q9Y651 276 aaPredicted RBP13.15□□□□□ -0.3
SIN3B-201ENST00000248054 DENND4AQ7Z401 1863 aa13.15□□□□□ -0.3
SIN3B-201ENST00000248054 RPL7P18124 248 aaKnown RBP13.15□□□□□ -0.3
SIN3B-201ENST00000248054 ID3Q02535 119 aa13.15□□□□□ -0.3
SIN3B-201ENST00000248054 DGAT2L7PQ6IED9 249 aa13.15□□□□□ -0.3
SIN3B-201ENST00000248054 CA2P00918 260 aa13.15□□□□□ -0.31
SIN3B-201ENST00000248054 SPANXN1Q5VSR9 72 aa13.15□□□□□ -0.31
SIN3B-201ENST00000248054 SLC25A34Q6PIV7 304 aa13.15□□□□□ -0.31
SIN3B-201ENST00000248054 TMEM170AQ8WVE7 144 aa13.15□□□□□ -0.31
SIN3B-201ENST00000248054 NPIPB11E5RHQ5 1161 aa13.14□□□□□ -0.31
SIN3B-201ENST00000248054 FAM201AQ5SY85 155 aa13.14□□□□□ -0.31
SIN3B-201ENST00000248054 RND2P52198 227 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms