RNA–Protein interactions for RNA: ENST00000247833.11

RAB3IP-201, Transcript of RAB3A interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3IP, Length 3,690 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-201ENST00000247833 RBMXL3Q8N7X1 1067 aaKnown RBP10.36□□□□□ -0.75
RAB3IP-201ENST00000247833 ADTRPQ96IZ2 230 aa10.36□□□□□ -0.75
RAB3IP-201ENST00000247833 DSCAMO60469 2012 aa10.36□□□□□ -0.75
RAB3IP-201ENST00000247833 SSX2Q16385 188 aa10.36□□□□□ -0.75
RAB3IP-201ENST00000247833 C17orf58Q2M2W7 97 aa10.36□□□□□ -0.75
RAB3IP-201ENST00000247833 CENPWQ5EE01 88 aa10.36□□□□□ -0.75
RAB3IP-201ENST00000247833 SEM1Q6ZVN7 128 aa10.36□□□□□ -0.75
RAB3IP-201ENST00000247833 BTF3L4Q96K17 158 aa10.36□□□□□ -0.75
RAB3IP-201ENST00000247833 RPEL1Q2QD12 228 aa10.35□□□□□ -0.75
RAB3IP-201ENST00000247833 ACTL10Q5JWF8 245 aa10.35□□□□□ -0.75
RAB3IP-201ENST00000247833 C10orf55Q5SWW7 151 aa10.35□□□□□ -0.75
RAB3IP-201ENST00000247833 TMEM108Q6UXF1 575 aa10.35□□□□□ -0.75
RAB3IP-201ENST00000247833 LHFPL4Q7Z7J7 247 aa10.35□□□□□ -0.75
RAB3IP-201ENST00000247833 ZNF664Q8N3J9 261 aa10.35□□□□□ -0.75
RAB3IP-201ENST00000247833 RNASE7Q9H1E1 156 aaKnown RBP10.35□□□□□ -0.75
RAB3IP-201ENST00000247833 CBLN4Q9NTU7 201 aa10.35□□□□□ -0.75
RAB3IP-201ENST00000247833 SAA1P0DJI8 122 aaPredicted RBP10.35□□□□□ -0.75
RAB3IP-201ENST00000247833 PMCHP20382 165 aa10.35□□□□□ -0.75
RAB3IP-201ENST00000247833 NTF3P20783 257 aa10.35□□□□□ -0.75
RAB3IP-201ENST00000247833 TAS2R45P59539 299 aa10.35□□□□□ -0.75
RAB3IP-201ENST00000247833 KRTDAPP60985 99 aa10.35□□□□□ -0.75
RAB3IP-201ENST00000247833 REC114Q7Z4M0 266 aa10.35□□□□□ -0.75
RAB3IP-201ENST00000247833 MRPL20Q9BYC9 149 aaKnown RBP10.35□□□□□ -0.75
RAB3IP-201ENST00000247833 MRPL18Q9H0U6 180 aaKnown RBP10.35□□□□□ -0.75
RAB3IP-201ENST00000247833 SAP30LQ9HAJ7 183 aa10.35□□□□□ -0.75
RAB3IP-201ENST00000247833 TECRQ9NZ01 308 aaKnown RBP10.35□□□□□ -0.75
RAB3IP-201ENST00000247833 F2RL2O00254 374 aa10.35□□□□□ -0.75
RAB3IP-201ENST00000247833 PRRG2O14669 202 aa10.35□□□□□ -0.75
RAB3IP-201ENST00000247833 COX7A2P2O60397 106 aa10.35□□□□□ -0.75
RAB3IP-201ENST00000247833 TNFRSF1AP19438 455 aa10.35□□□□□ -0.75
RAB3IP-201ENST00000247833 CD40P25942 277 aa10.35□□□□□ -0.75
RAB3IP-201ENST00000247833 LCN2P80188 198 aa10.35□□□□□ -0.75
RAB3IP-201ENST00000247833 VWC2Q2TAL6 325 aa10.35□□□□□ -0.75
RAB3IP-201ENST00000247833 OR2T6Q8NHC8 308 aa10.35□□□□□ -0.75
RAB3IP-201ENST00000247833 TBX15Q96SF7 602 aa10.35□□□□□ -0.75
RAB3IP-201ENST00000247833 TOX4O94842 621 aa10.34□□□□□ -0.75
RAB3IP-201ENST00000247833 PRR31Q5SQ13 230 aa10.34□□□□□ -0.75
RAB3IP-201ENST00000247833 MMD2Q8IY49 270 aa10.34□□□□□ -0.75
RAB3IP-201ENST00000247833 BLNKQ8WV28 456 aa10.34□□□□□ -0.75
RAB3IP-201ENST00000247833 K7EM74 188 aa10.34□□□□□ -0.75
RAB3IP-201ENST00000247833 SSBP3Q9BWW4 388 aaPredicted RBP10.34□□□□□ -0.75
RAB3IP-201ENST00000247833 ORM2P19652 201 aa10.34□□□□□ -0.75
RAB3IP-201ENST00000247833 OR52E5Q8NH55 327 aa10.34□□□□□ -0.75
RAB3IP-201ENST00000247833 HSPB9Q9BQS6 159 aa10.34□□□□□ -0.75
RAB3IP-201ENST00000247833 PAM16Q9Y3D7 125 aa10.34□□□□□ -0.75
RAB3IP-201ENST00000247833 TIMM8BQ9Y5J9 83 aaPredicted RBP10.34□□□□□ -0.75
RAB3IP-201ENST00000247833 TRAV5A0A0B4J249 113 aa10.33□□□□□ -0.76
RAB3IP-201ENST00000247833 GCGP01275 180 aa10.33□□□□□ -0.76
RAB3IP-201ENST00000247833 HCP5Q6MZN7 132 aa10.33□□□□□ -0.76
RAB3IP-201ENST00000247833 C22orf34Q6ZV56 151 aa10.33□□□□□ -0.76
RAB3IP-201ENST00000247833 RAB1CQ92928 201 aa10.33□□□□□ -0.76
RAB3IP-201ENST00000247833 FLYWCH2Q96CP2 140 aaKnown RBP10.33□□□□□ -0.76
RAB3IP-201ENST00000247833 PYGO2Q9BRQ0 406 aa10.33□□□□□ -0.76
RAB3IP-201ENST00000247833 TMEM167BQ9NRX6 74 aa10.33□□□□□ -0.76
RAB3IP-201ENST00000247833 ELOVL5Q9NYP7 299 aa10.33□□□□□ -0.76
RAB3IP-201ENST00000247833 IL19Q9UHD0 177 aa10.33□□□□□ -0.76
RAB3IP-201ENST00000247833 FAM215AQ9Y5M1 114 aa10.33□□□□□ -0.76
RAB3IP-201ENST00000247833 SRRM4A7MD48 611 aaKnown RBP10.33□□□□□ -0.76
RAB3IP-201ENST00000247833 CA1P00915 261 aaPredicted RBP10.33□□□□□ -0.76
RAB3IP-201ENST00000247833 LINC00869P0C866 280 aa10.33□□□□□ -0.76
RAB3IP-201ENST00000247833 CCKARP32238 428 aa10.33□□□□□ -0.76
RAB3IP-201ENST00000247833 GUSBP1Q15486 140 aa10.33□□□□□ -0.76
RAB3IP-201ENST00000247833 VN1R17PQ8TDU5 208 aa10.33□□□□□ -0.76
RAB3IP-201ENST00000247833 MISP3Q96FF7 219 aa10.33□□□□□ -0.76
RAB3IP-201ENST00000247833 GAL3ST2Q9H3Q3 398 aa10.33□□□□□ -0.76
RAB3IP-201ENST00000247833 SSUH2Q9Y2M2 353 aa10.33□□□□□ -0.76
RAB3IP-201ENST00000247833 MBD3L4A6NDZ8 208 aaPredicted RBP10.32□□□□□ -0.76
RAB3IP-201ENST00000247833 MBD3L3A6NE82 208 aaPredicted RBP10.32□□□□□ -0.76
RAB3IP-201ENST00000247833 MBD3L5A6NJ08 208 aaPredicted RBP10.32□□□□□ -0.76
RAB3IP-201ENST00000247833 H3BTX0 84 aa10.32□□□□□ -0.76
RAB3IP-201ENST00000247833 G0S2P27469 103 aa10.32□□□□□ -0.76
RAB3IP-201ENST00000247833 ZNF600Q6ZNG1 722 aa10.32□□□□□ -0.76
RAB3IP-201ENST00000247833 C1orf174Q8IYL3 243 aa10.32□□□□□ -0.76
RAB3IP-201ENST00000247833 OR5AU1Q8NGC0 362 aa10.32□□□□□ -0.76
RAB3IP-201ENST00000247833 MBD3L2Q8NHZ7 208 aaPredicted RBP10.32□□□□□ -0.76
RAB3IP-201ENST00000247833 ZCCHC14Q8WYQ9 949 aaKnown RBP10.32□□□□□ -0.76
RAB3IP-201ENST00000247833 EAF1Q96JC9 268 aaPredicted RBP10.32□□□□□ -0.76
RAB3IP-201ENST00000247833 GAFA1Q96PS6 74 aa10.32□□□□□ -0.76
RAB3IP-201ENST00000247833 ATG101Q9BSB4 218 aa10.32□□□□□ -0.76
RAB3IP-201ENST00000247833 TRAV34A0A0B4J273 112 aa10.32□□□□□ -0.76
RAB3IP-201ENST00000247833 VSTM5A8MXK1 200 aa10.32□□□□□ -0.76
RAB3IP-201ENST00000247833 NDUFB3O43676 98 aa10.32□□□□□ -0.76
RAB3IP-201ENST00000247833 SLC25A17O43808 307 aa10.32□□□□□ -0.76
RAB3IP-201ENST00000247833 NUPR1O60356 82 aa10.32□□□□□ -0.76
RAB3IP-201ENST00000247833 CRYABP02511 175 aaKnown RBP10.32□□□□□ -0.76
RAB3IP-201ENST00000247833 CT45A6P0DMU7 189 aa10.32□□□□□ -0.76
RAB3IP-201ENST00000247833 CT45A5P0DMU8 189 aa10.32□□□□□ -0.76
RAB3IP-201ENST00000247833 CT45A7P0DMV0 189 aa10.32□□□□□ -0.76
RAB3IP-201ENST00000247833 TPPP2P59282 170 aa10.32□□□□□ -0.76
RAB3IP-201ENST00000247833 RPL8P62917 257 aaKnown RBP10.32□□□□□ -0.76
RAB3IP-201ENST00000247833 ZNF714Q96N38 554 aa10.32□□□□□ -0.76
RAB3IP-201ENST00000247833 TET2Q6N021 2002 aaPredicted RBP10.32□□□□□ -0.76
RAB3IP-201ENST00000247833 UPK2O00526 184 aa10.32□□□□□ -0.76
RAB3IP-201ENST00000247833 FRMD6-AS1P0C7T7 363 aa10.32□□□□□ -0.76
RAB3IP-201ENST00000247833 PRB4P10163 310 aaPredicted RBP10.32□□□□□ -0.76
RAB3IP-201ENST00000247833 Q8N7P7 452 aa10.32□□□□□ -0.76
RAB3IP-201ENST00000247833 SIGLECL1Q8N7X8 197 aa10.32□□□□□ -0.76
RAB3IP-201ENST00000247833 OR5R1Q8NH85 324 aa10.32□□□□□ -0.76
RAB3IP-201ENST00000247833 NPIPB3Q92617 1050 aa10.32□□□□□ -0.76
RAB3IP-201ENST00000247833 NAGKQ9UJ70 344 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms