RNA–Protein interactions for RNA: ENST00000238146.8

DDX55-201, Transcript of DEAD-box helicase 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX55, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-201ENST00000238146 TCF21O43680 179 aa12.72□□□□□ -0.37
DDX55-201ENST00000238146 GATA2P23769 480 aaPredicted RBP12.72□□□□□ -0.37
DDX55-201ENST00000238146 IBA57Q5T440 356 aaKnown RBP12.72□□□□□ -0.37
DDX55-201ENST00000238146 Q6ZN92 141 aa12.72□□□□□ -0.37
DDX55-201ENST00000238146 TSKUQ8WUA8 353 aa12.72□□□□□ -0.37
DDX55-201ENST00000238146 TXN2Q99757 166 aa12.72□□□□□ -0.37
DDX55-201ENST00000238146 WNT10AQ9GZT5 417 aa12.72□□□□□ -0.37
DDX55-201ENST00000238146 IDI2-AS1Q9NZ38 188 aa12.72□□□□□ -0.37
DDX55-201ENST00000238146 LAMTOR2Q9Y2Q5 125 aa12.72□□□□□ -0.37
DDX55-201ENST00000238146 C21orf140B9A014 251 aa12.71□□□□□ -0.37
DDX55-201ENST00000238146 FNDC10F2Z333 226 aa12.71□□□□□ -0.37
DDX55-201ENST00000238146 OR7C2O60412 319 aa12.71□□□□□ -0.37
DDX55-201ENST00000238146 CD46P15529 392 aa12.71□□□□□ -0.37
DDX55-201ENST00000238146 GCM1Q9NP62 436 aa12.71□□□□□ -0.37
DDX55-201ENST00000238146 PRRC2CQ9Y520 2896 aaKnown RBP12.71□□□□□ -0.37
DDX55-201ENST00000238146 ZNRF1Q8ND25 227 aa12.71□□□□□ -0.38
DDX55-201ENST00000238146 IGF2BP2-AS1Q96M15 143 aa12.71□□□□□ -0.38
DDX55-201ENST00000238146 KNTC1P50748 2209 aa12.71□□□□□ -0.38
DDX55-201ENST00000238146 LNP1A1A4G5 178 aa12.7□□□□□ -0.38
DDX55-201ENST00000238146 SRRM5B3KS81 715 aa12.7□□□□□ -0.38
DDX55-201ENST00000238146 CECR9P0C854 216 aa12.7□□□□□ -0.38
DDX55-201ENST00000238146 MGST1P10620 155 aaKnown RBP12.7□□□□□ -0.38
DDX55-201ENST00000238146 PPOXP50336 477 aa12.7□□□□□ -0.38
DDX55-201ENST00000238146 HNRNPA3P51991 378 aaKnown RBP12.7□□□□□ -0.38
DDX55-201ENST00000238146 CT45A1Q5HYN5 189 aa12.7□□□□□ -0.38
DDX55-201ENST00000238146 ZNF439Q8NDP4 499 aa12.7□□□□□ -0.38
DDX55-201ENST00000238146 CT45A3Q8NHU0 189 aa12.7□□□□□ -0.38
DDX55-201ENST00000238146 SERTAD4Q9NUC0 356 aa12.7□□□□□ -0.38
DDX55-201ENST00000238146 WDFY4Q6ZS81 3184 aa12.7□□□□□ -0.38
DDX55-201ENST00000238146 IGHV3OR15-7A0A075B7D8 119 aa12.7□□□□□ -0.38
DDX55-201ENST00000238146 CA1P00915 261 aaPredicted RBP12.7□□□□□ -0.38
DDX55-201ENST00000238146 APCSP02743 223 aa12.7□□□□□ -0.38
DDX55-201ENST00000238146 PLEKHA3Q9HB20 300 aa12.7□□□□□ -0.38
DDX55-201ENST00000238146 CALYQ9NYX4 217 aa12.7□□□□□ -0.38
DDX55-201ENST00000238146 SAA2P0DJI9 122 aaPredicted RBP12.69□□□□□ -0.38
DDX55-201ENST00000238146 NTF3P20783 257 aa12.69□□□□□ -0.38
DDX55-201ENST00000238146 SLAQ13239 276 aa12.69□□□□□ -0.38
DDX55-201ENST00000238146 C21orf62-AS1Q17RA5 79 aa12.69□□□□□ -0.38
DDX55-201ENST00000238146 C19orf35Q6ZS72 473 aa12.69□□□□□ -0.38
DDX55-201ENST00000238146 OR2Z1Q8NG97 314 aa12.69□□□□□ -0.38
DDX55-201ENST00000238146 FAM168AQ92567 244 aa12.69□□□□□ -0.38
DDX55-201ENST00000238146 OR51B2Q9Y5P1 312 aa12.69□□□□□ -0.38
DDX55-201ENST00000238146 TNCP24821 2201 aa12.69□□□□□ -0.38
DDX55-201ENST00000238146 HOXC12P31275 282 aa12.69□□□□□ -0.38
DDX55-201ENST00000238146 ATOH7Q8N100 152 aa12.69□□□□□ -0.38
DDX55-201ENST00000238146 PPP1R35Q8TAP8 253 aa12.69□□□□□ -0.38
DDX55-201ENST00000238146 C18orf32Q8TCD1 76 aa12.69□□□□□ -0.38
DDX55-201ENST00000238146 SLC35D1Q9NTN3 355 aa12.69□□□□□ -0.38
DDX55-201ENST00000238146 CLCF1Q9UBD9 225 aa12.69□□□□□ -0.38
DDX55-201ENST00000238146 TRAV34A0A0B4J273 112 aa12.68□□□□□ -0.38
DDX55-201ENST00000238146 A0A1W2PRE2 83 aa12.68□□□□□ -0.38
DDX55-201ENST00000238146 IZUMO1RA6ND01 250 aa12.68□□□□□ -0.38
DDX55-201ENST00000238146 LPAL2Q16609 132 aa12.68□□□□□ -0.38
DDX55-201ENST00000238146 MAJINQ3KP22 176 aa12.68□□□□□ -0.38
DDX55-201ENST00000238146 ASPHD1Q5U4P2 390 aa12.68□□□□□ -0.38
DDX55-201ENST00000238146 GCSAMQ8N6F7 178 aa12.68□□□□□ -0.38
DDX55-201ENST00000238146 CNEP1R1Q8N9A8 125 aa12.68□□□□□ -0.38
DDX55-201ENST00000238146 CLEC7AQ9BXN2 247 aa12.68□□□□□ -0.38
DDX55-201ENST00000238146 J3QR06 171 aa12.68□□□□□ -0.38
DDX55-201ENST00000238146 CGB3P0DN86 165 aa12.68□□□□□ -0.38
DDX55-201ENST00000238146 CGB7P0DN87 165 aa12.68□□□□□ -0.38
DDX55-201ENST00000238146 USF1P22415 310 aaPredicted RBP12.68□□□□□ -0.38
DDX55-201ENST00000238146 LCN12Q6JVE5 192 aa12.68□□□□□ -0.38
DDX55-201ENST00000238146 KLHDC1Q8N7A1 406 aa12.68□□□□□ -0.38
DDX55-201ENST00000238146 NHLRC2Q8NBF2 726 aa12.68□□□□□ -0.38
DDX55-201ENST00000238146 BORCS7Q96B45 105 aa12.68□□□□□ -0.38
DDX55-201ENST00000238146 MLANAQ16655 118 aa12.67□□□□□ -0.38
DDX55-201ENST00000238146 C17orf58Q2M2W7 97 aa12.67□□□□□ -0.38
DDX55-201ENST00000238146 MBNL2Q5VZF2 373 aaKnown RBP12.67□□□□□ -0.38
DDX55-201ENST00000238146 TRIB1Q96RU8 372 aa12.67□□□□□ -0.38
DDX55-201ENST00000238146 SSBP3Q9BWW4 388 aaPredicted RBP12.67□□□□□ -0.38
DDX55-201ENST00000238146 ZNF331Q9NQX6 463 aaPredicted RBP12.67□□□□□ -0.38
DDX55-201ENST00000238146 MRPL27Q9P0M9 148 aaKnown RBP12.67□□□□□ -0.38
DDX55-201ENST00000238146 ITGB1BP1O14713 200 aa12.67□□□□□ -0.38
DDX55-201ENST00000238146 TAS2R45P59539 299 aa12.67□□□□□ -0.38
DDX55-201ENST00000238146 SELENOVP59797 346 aa12.67□□□□□ -0.38
DDX55-201ENST00000238146 LINC00479Q96M42 142 aa12.67□□□□□ -0.38
DDX55-201ENST00000238146 SLC25A33Q9BSK2 321 aa12.67□□□□□ -0.38
DDX55-201ENST00000238146 TUBG2Q9NRH3 451 aa12.67□□□□□ -0.38
DDX55-201ENST00000238146 IGHV2OR16-5A0A0B4J2B6 119 aa12.66□□□□□ -0.38
DDX55-201ENST00000238146 LAMTOR5O43504 91 aa12.66□□□□□ -0.38
DDX55-201ENST00000238146 TSPOP30536 169 aa12.66□□□□□ -0.38
DDX55-201ENST00000238146 PCP4P48539 62 aa12.66□□□□□ -0.38
DDX55-201ENST00000238146 GUSBP1Q15486 140 aa12.66□□□□□ -0.38
DDX55-201ENST00000238146 POU2AF1Q16633 256 aa12.66□□□□□ -0.38
DDX55-201ENST00000238146 SPRNQ5BIV9 151 aa12.66□□□□□ -0.38
DDX55-201ENST00000238146 TMEM164Q5U3C3 297 aa12.66□□□□□ -0.38
DDX55-201ENST00000238146 VWA1Q6PCB0 445 aa12.66□□□□□ -0.38
DDX55-201ENST00000238146 SPACA3Q8IXA5 215 aa12.66□□□□□ -0.38
DDX55-201ENST00000238146 OR9G1Q8NH87 305 aa12.66□□□□□ -0.38
DDX55-201ENST00000238146 YLPM1P49750 1951 aaKnown RBP12.66□□□□□ -0.38
DDX55-201ENST00000238146 C8orf88P0DMB2 117 aa12.66□□□□□ -0.38
DDX55-201ENST00000238146 PRCDQ00LT1 54 aa12.66□□□□□ -0.38
DDX55-201ENST00000238146 TNXAQ16473 311 aa12.66□□□□□ -0.38
DDX55-201ENST00000238146 RTL8BQ17RB0 113 aa12.66□□□□□ -0.38
DDX55-201ENST00000238146 LYG1Q8N1E2 194 aa12.66□□□□□ -0.38
DDX55-201ENST00000238146 PNKDQ8N490 385 aa12.66□□□□□ -0.38
DDX55-201ENST00000238146 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.66□□□□□ -0.38
DDX55-201ENST00000238146 ORAOV1Q8WV07 137 aa12.66□□□□□ -0.38
DDX55-201ENST00000238146 C19orf24Q9BVV8 132 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms