RNA–Protein interactions for RNA: ENST00000234420.9

MSH6-201, Transcript of mutS homolog 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH6, Length 7,476 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-201ENST00000234420 UBE2CO00762 179 aa9.47□□□□□ -0.89
MSH6-201ENST00000234420 UCP2P55851 309 aa9.47□□□□□ -0.89
MSH6-201ENST00000234420 ZNF114Q8NC26 417 aa9.47□□□□□ -0.89
MSH6-201ENST00000234420 NCOR1P1Q9H4R4 102 aa9.47□□□□□ -0.89
MSH6-201ENST00000234420 ST20Q9HBF5 79 aa9.47□□□□□ -0.89
MSH6-201ENST00000234420 SEC11AP67812 179 aa9.47□□□□□ -0.89
MSH6-201ENST00000234420 COQ2Q96H96 371 aa9.47□□□□□ -0.89
MSH6-201ENST00000234420 ZNF625Q96I27 306 aaPredicted RBP9.47□□□□□ -0.89
MSH6-201ENST00000234420 CARHSP1Q9Y2V2 147 aaKnown RBP9.47□□□□□ -0.89
MSH6-201ENST00000234420 H3BRM9 83 aa9.47□□□□□ -0.89
MSH6-201ENST00000234420 PEX7O00628 323 aa9.47□□□□□ -0.89
MSH6-201ENST00000234420 TSPOP30536 169 aa9.47□□□□□ -0.89
MSH6-201ENST00000234420 HMGA2P52926 109 aa9.47□□□□□ -0.89
MSH6-201ENST00000234420 LGALS1P09382 135 aaKnown RBP9.47□□□□□ -0.89
MSH6-201ENST00000234420 CLEC7AQ9BXN2 247 aa9.47□□□□□ -0.89
MSH6-201ENST00000234420 ERG28Q9UKR5 140 aa9.47□□□□□ -0.89
MSH6-201ENST00000234420 SHANK3Q9BYB0 1731 aa9.47□□□□□ -0.89
MSH6-201ENST00000234420 IL11P20809 199 aa9.47□□□□□ -0.89
MSH6-201ENST00000234420 FBXW9Q5XUX1 488 aa9.47□□□□□ -0.89
MSH6-201ENST00000234420 MPC1Q9Y5U8 109 aa9.47□□□□□ -0.89
MSH6-201ENST00000234420 IGHV3-64A0A075B6Q5 118 aa9.46□□□□□ -0.89
MSH6-201ENST00000234420 TRAV24A0A0B4J272 114 aa9.46□□□□□ -0.89
MSH6-201ENST00000234420 HBDP02042 147 aa9.46□□□□□ -0.89
MSH6-201ENST00000234420 TBR1Q16650 682 aa9.46□□□□□ -0.89
MSH6-201ENST00000234420 SPTBN2O15020 2390 aa9.46□□□□□ -0.89
MSH6-201ENST00000234420 ODAMA1E959 279 aa9.46□□□□□ -0.89
MSH6-201ENST00000234420 EREGO14944 169 aa9.46□□□□□ -0.89
MSH6-201ENST00000234420 IL17RELQ6ZVW7 336 aa9.46□□□□□ -0.89
MSH6-201ENST00000234420 RTN4RL2Q86UN3 420 aa9.46□□□□□ -0.9
MSH6-201ENST00000234420 MS4A6AQ9H2W1 248 aa9.46□□□□□ -0.9
MSH6-201ENST00000234420 WDR82Q6UXN9 313 aa9.46□□□□□ -0.9
MSH6-201ENST00000234420 RFLNBQ8N5W9 214 aa9.46□□□□□ -0.9
MSH6-201ENST00000234420 BRCA1P38398 1863 aaKnown RBP9.46□□□□□ -0.9
MSH6-201ENST00000234420 H0Y980 276 aa9.46□□□□□ -0.9
MSH6-201ENST00000234420 HIST1H2BKO60814 126 aa9.46□□□□□ -0.9
MSH6-201ENST00000234420 HIST1H2BJP06899 126 aa9.46□□□□□ -0.9
MSH6-201ENST00000234420 HIST1H2BOP23527 126 aa9.46□□□□□ -0.9
MSH6-201ENST00000234420 HIST1H2BBP33778 126 aa9.46□□□□□ -0.9
MSH6-201ENST00000234420 HIST1H2BDP58876 126 aa9.46□□□□□ -0.9
MSH6-201ENST00000234420 HIST1H2BCP62807 126 aa9.46□□□□□ -0.9
MSH6-201ENST00000234420 HIST2H2BEQ16778 126 aa9.46□□□□□ -0.9
MSH6-201ENST00000234420 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.46□□□□□ -0.9
MSH6-201ENST00000234420 C2orf82Q6UX34 121 aa9.46□□□□□ -0.9
MSH6-201ENST00000234420 ADAMTSL5Q6ZMM2 481 aa9.46□□□□□ -0.9
MSH6-201ENST00000234420 TMEM219Q86XT9 240 aa9.46□□□□□ -0.9
MSH6-201ENST00000234420 GATD1Q8NB37 220 aa9.46□□□□□ -0.9
MSH6-201ENST00000234420 HIST1H2BHQ93079 126 aa9.46□□□□□ -0.9
MSH6-201ENST00000234420 HIST1H2BNQ99877 126 aa9.46□□□□□ -0.9
MSH6-201ENST00000234420 HIST1H2BMQ99879 126 aa9.46□□□□□ -0.9
MSH6-201ENST00000234420 A0A0G2JMM0 328 aa9.45□□□□□ -0.9
MSH6-201ENST00000234420 SCO2A0A1W2PP80 73 aa9.45□□□□□ -0.9
MSH6-201ENST00000234420 A0A1W2PPB8 328 aa9.45□□□□□ -0.9
MSH6-201ENST00000234420 KIR3DP1A8MWS1 328 aa9.45□□□□□ -0.9
MSH6-201ENST00000234420 LYNX1G3V0Z9 82 aa9.45□□□□□ -0.9
MSH6-201ENST00000234420 HLA-DQB1P01920 261 aa9.45□□□□□ -0.9
MSH6-201ENST00000234420 LYNX1P0DP58 116 aa9.45□□□□□ -0.9
MSH6-201ENST00000234420 CBLN3Q6UW01 205 aa9.45□□□□□ -0.9
MSH6-201ENST00000234420 POC1AQ8NBT0 407 aa9.45□□□□□ -0.9
MSH6-201ENST00000234420 OR51G1Q8NGK1 321 aa9.45□□□□□ -0.9
MSH6-201ENST00000234420 SRSF8Q9BRL6 282 aaKnown RBP9.45□□□□□ -0.9
MSH6-201ENST00000234420 TMEM222Q9H0R3 208 aa9.45□□□□□ -0.9
MSH6-201ENST00000234420 ADAMTS9Q9P2N4 1935 aa9.45□□□□□ -0.9
MSH6-201ENST00000234420 M0R2P5 195 aa9.45□□□□□ -0.9
MSH6-201ENST00000234420 SCTP09683 121 aa9.45□□□□□ -0.9
MSH6-201ENST00000234420 HIST1H2BLQ99880 126 aa9.45□□□□□ -0.9
MSH6-201ENST00000234420 HSD52Q0P140 79 aa9.45□□□□□ -0.9
MSH6-201ENST00000234420 NCKAP5O14513 1909 aa9.45□□□□□ -0.9
MSH6-201ENST00000234420 A0A087X0K7 114 aa9.45□□□□□ -0.9
MSH6-201ENST00000234420 A8MXK9 166 aa9.45□□□□□ -0.9
MSH6-201ENST00000234420 GZMBP10144 247 aa9.45□□□□□ -0.9
MSH6-201ENST00000234420 NPPCP23582 126 aa9.45□□□□□ -0.9
MSH6-201ENST00000234420 GCHFRP30047 84 aa9.45□□□□□ -0.9
MSH6-201ENST00000234420 PRSS53Q2L4Q9 553 aa9.45□□□□□ -0.9
MSH6-201ENST00000234420 NPIPB4C9JG80 1138 aa9.45□□□□□ -0.9
MSH6-201ENST00000234420 ZG16O60844 167 aa9.45□□□□□ -0.9
MSH6-201ENST00000234420 RNF182Q8N6D2 247 aa9.45□□□□□ -0.9
MSH6-201ENST00000234420 KDM3BQ7LBC6 1761 aa9.45□□□□□ -0.9
MSH6-201ENST00000234420 GPX4P36969 197 aaPredicted RBP9.45□□□□□ -0.9
MSH6-201ENST00000234420 LRP10Q7Z4F1 713 aa9.45□□□□□ -0.9
MSH6-201ENST00000234420 A0A1B0GUT8 65 aa9.44□□□□□ -0.9
MSH6-201ENST00000234420 PSG9Q00887 426 aa9.44□□□□□ -0.9
MSH6-201ENST00000234420 TMEM74BQ9NUR3 256 aa9.44□□□□□ -0.9
MSH6-201ENST00000234420 DOCK4Q8N1I0 1966 aa9.44□□□□□ -0.9
MSH6-201ENST00000234420 DPM2O94777 84 aa9.44□□□□□ -0.9
MSH6-201ENST00000234420 CFHR3Q02985 330 aa9.44□□□□□ -0.9
MSH6-201ENST00000234420 FAM201AQ5SY85 155 aa9.44□□□□□ -0.9
MSH6-201ENST00000234420 CALYQ9NYX4 217 aa9.44□□□□□ -0.9
MSH6-201ENST00000234420 SS18L2Q9UHA2 77 aa9.44□□□□□ -0.9
MSH6-201ENST00000234420 TRAV40A0A0B4J280 105 aa9.44□□□□□ -0.9
MSH6-201ENST00000234420 TNFSF13O75888 250 aa9.44□□□□□ -0.9
MSH6-201ENST00000234420 GLRXP35754 106 aa9.44□□□□□ -0.9
MSH6-201ENST00000234420 RPL27AP46776 148 aaKnown RBP9.44□□□□□ -0.9
MSH6-201ENST00000234420 FGFRL1Q8N441 504 aa9.44□□□□□ -0.9
MSH6-201ENST00000234420 SFXN3Q9BWM7 321 aa9.44□□□□□ -0.9
MSH6-201ENST00000234420 FBXL15Q9H469 300 aa9.44□□□□□ -0.9
MSH6-201ENST00000234420 IGLV3-10A0A075B6K4 115 aa9.44□□□□□ -0.9
MSH6-201ENST00000234420 VAX1Q5SQQ9 334 aa9.44□□□□□ -0.9
MSH6-201ENST00000234420 TMEM42Q69YG0 159 aa9.44□□□□□ -0.9
MSH6-201ENST00000234420 ABCA1O95477 2261 aa9.44□□□□□ -0.9
MSH6-201ENST00000234420 TMEM170AQ8WVE7 144 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms