RNA–Protein interactions for RNA: ENST00000233468.4

SF3B6-201, Transcript of splicing factor 3b subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B6, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-201ENST00000233468 TMEM187Q14656 261 aa8.74□□□□□ -1.01
SF3B6-201ENST00000233468 TATDN3Q17R31 274 aa8.74□□□□□ -1.01
SF3B6-201ENST00000233468 C18orf65Q6ZTR6 163 aa8.74□□□□□ -1.01
SF3B6-201ENST00000233468 SELENOHQ8IZQ5 122 aaKnown RBP8.74□□□□□ -1.01
SF3B6-201ENST00000233468 SLC35G3Q8N808 338 aa8.74□□□□□ -1.01
SF3B6-201ENST00000233468 LINC00482Q8N8I6 264 aa8.74□□□□□ -1.01
SF3B6-201ENST00000233468 CASTOR1Q8WTX7 329 aa8.74□□□□□ -1.01
SF3B6-201ENST00000233468 TMEM230Q96A57 120 aa8.74□□□□□ -1.01
SF3B6-201ENST00000233468 CXorf58Q96LI9 332 aa8.74□□□□□ -1.01
SF3B6-201ENST00000233468 OR5B12Q96R08 314 aa8.74□□□□□ -1.01
SF3B6-201ENST00000233468 PLEKHA3Q9HB20 300 aa8.74□□□□□ -1.01
SF3B6-201ENST00000233468 SHPKQ9UHJ6 478 aa8.74□□□□□ -1.01
SF3B6-201ENST00000233468 IGLC7A0M8Q6 106 aa8.73□□□□□ -1.01
SF3B6-201ENST00000233468 E7EUB6 86 aa8.73□□□□□ -1.01
SF3B6-201ENST00000233468 IGKV1-5P01602 117 aa8.73□□□□□ -1.01
SF3B6-201ENST00000233468 IGHV3-11P01762 117 aa8.73□□□□□ -1.01
SF3B6-201ENST00000233468 AREGP15514 252 aa8.73□□□□□ -1.01
SF3B6-201ENST00000233468 CCR6P51684 374 aa8.73□□□□□ -1.01
SF3B6-201ENST00000233468 SUB1P53999 127 aaKnown RBP eCLIP8.73□□□□□ -1.014e-6■■□□□ 11.8
SF3B6-201ENST00000233468 PRCDQ00LT1 54 aa8.73□□□□□ -1.01
SF3B6-201ENST00000233468 FHL3Q13643 280 aa8.73□□□□□ -1.01
SF3B6-201ENST00000233468 DEFB136Q30KP8 78 aa8.73□□□□□ -1.01
SF3B6-201ENST00000233468 ETV3LQ6ZN32 361 aa8.73□□□□□ -1.01
SF3B6-201ENST00000233468 OR52E5Q8NH55 327 aa8.73□□□□□ -1.01
SF3B6-201ENST00000233468 EEF1AKMT3Q96AZ1 226 aa8.73□□□□□ -1.01
SF3B6-201ENST00000233468 PEF1Q9UBV8 284 aaKnown RBP8.73□□□□□ -1.01
SF3B6-201ENST00000233468 FBXL7Q9UJT9 491 aa8.73□□□□□ -1.01
SF3B6-201ENST00000233468 A0A0B4J293 547 aa8.72□□□□□ -1.01
SF3B6-201ENST00000233468 OR2J3O76001 311 aa8.72□□□□□ -1.01
SF3B6-201ENST00000233468 SFT2D2O95562 160 aa8.72□□□□□ -1.01
SF3B6-201ENST00000233468 P0C879 139 aa8.72□□□□□ -1.01
SF3B6-201ENST00000233468 SULT1A3P0DMM9 295 aa8.72□□□□□ -1.01
SF3B6-201ENST00000233468 SULT1A4P0DMN0 295 aa8.72□□□□□ -1.01
SF3B6-201ENST00000233468 MYOD1P15172 320 aa8.72□□□□□ -1.01
SF3B6-201ENST00000233468 SNCAP37840 140 aa8.72□□□□□ -1.01
SF3B6-201ENST00000233468 SPCS3P61009 180 aa8.72□□□□□ -1.01
SF3B6-201ENST00000233468 EXOSC2Q13868 293 aaKnown RBP8.72□□□□□ -1.01
SF3B6-201ENST00000233468 KLK9Q2XQG4 91 aa8.72□□□□□ -1.01
SF3B6-201ENST00000233468 C15orf32Q32M92 178 aa8.72□□□□□ -1.01
SF3B6-201ENST00000233468 SLC25A24Q6NUK1 477 aa8.72□□□□□ -1.01
SF3B6-201ENST00000233468 ZNF343Q6P1L6 599 aa8.72□□□□□ -1.01
SF3B6-201ENST00000233468 OR1P1Q8NH06 330 aa8.72□□□□□ -1.01
SF3B6-201ENST00000233468 COQ8AQ8NI60 647 aa8.72□□□□□ -1.01
SF3B6-201ENST00000233468 KLK9Q9UKQ9 250 aa8.72□□□□□ -1.01
SF3B6-201ENST00000233468 F11RQ9Y624 299 aaKnown RBP8.72□□□□□ -1.01
SF3B6-201ENST00000233468 IGLV11-55A0A075B6I3 123 aa8.71□□□□□ -1.02
SF3B6-201ENST00000233468 TRBV7-1A0A0A6YYK4 115 aa8.71□□□□□ -1.02
SF3B6-201ENST00000233468 FAM240BA0A1B0GVZ2 78 aa8.71□□□□□ -1.02
SF3B6-201ENST00000233468 A0A1B0GW64 132 aa8.71□□□□□ -1.02
SF3B6-201ENST00000233468 CGB1A6NKQ9 187 aa8.71□□□□□ -1.02
SF3B6-201ENST00000233468 INS-IGF2F8WCM5 200 aa8.71□□□□□ -1.02
SF3B6-201ENST00000233468 ST8SIA3O43173 380 aa8.71□□□□□ -1.02
SF3B6-201ENST00000233468 UPK1BO75841 260 aa8.71□□□□□ -1.02
SF3B6-201ENST00000233468 PRH1P02810 166 aa8.71□□□□□ -1.02
SF3B6-201ENST00000233468 REG1AP05451 166 aa8.71□□□□□ -1.02
SF3B6-201ENST00000233468 HOXA1P49639 335 aaPredicted RBP8.71□□□□□ -1.02
SF3B6-201ENST00000233468 INSL3P51460 131 aa8.71□□□□□ -1.02
SF3B6-201ENST00000233468 DEFA1P59665 94 aa8.71□□□□□ -1.02
SF3B6-201ENST00000233468 DEFA3P59666 94 aa8.71□□□□□ -1.02
SF3B6-201ENST00000233468 SUPT4H1P63272 117 aaKnown RBP8.71□□□□□ -1.02
SF3B6-201ENST00000233468 WT1-ASQ06250 92 aa8.71□□□□□ -1.02
SF3B6-201ENST00000233468 PPP1R1AQ13522 171 aa8.71□□□□□ -1.02
SF3B6-201ENST00000233468 C4orf46Q504U0 113 aa8.71□□□□□ -1.02
SF3B6-201ENST00000233468 OR2C3Q8N628 320 aa8.71□□□□□ -1.02
SF3B6-201ENST00000233468 LRTM2Q8N967 370 aa8.71□□□□□ -1.02
SF3B6-201ENST00000233468 OR10W1Q8NGF6 305 aa8.71□□□□□ -1.02
SF3B6-201ENST00000233468 VN1R17PQ8TDU5 208 aa8.71□□□□□ -1.02
SF3B6-201ENST00000233468 DUX3Q96PT4 197 aa8.71□□□□□ -1.02
SF3B6-201ENST00000233468 ELOVL1Q9BW60 279 aa8.71□□□□□ -1.02
SF3B6-201ENST00000233468 ALX4Q9H161 411 aaPredicted RBP8.71□□□□□ -1.02
SF3B6-201ENST00000233468 GAR1Q9NY12 217 aaKnown RBP8.71□□□□□ -1.02
SF3B6-201ENST00000233468 CACNG5Q9UF02 275 aa8.71□□□□□ -1.02
SF3B6-201ENST00000233468 TMED3Q9Y3Q3 217 aa8.71□□□□□ -1.02
SF3B6-201ENST00000233468 IGHV4OR15-8A0A075B7B6 117 aa8.7□□□□□ -1.02
SF3B6-201ENST00000233468 A0A087WW49 117 aa8.7□□□□□ -1.02
SF3B6-201ENST00000233468 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.7□□□□□ -1.02
SF3B6-201ENST00000233468 A0A1B0GU03 582 aa8.7□□□□□ -1.02
SF3B6-201ENST00000233468 ANKRD34BA5PLL1 514 aa8.7□□□□□ -1.02
SF3B6-201ENST00000233468 DBX1A6NMT0 343 aa8.7□□□□□ -1.02
SF3B6-201ENST00000233468 CORTO00230 105 aa8.7□□□□□ -1.02
SF3B6-201ENST00000233468 OVOL1O14753 267 aa8.7□□□□□ -1.02
SF3B6-201ENST00000233468 PLA2G10O15496 165 aa8.7□□□□□ -1.02
SF3B6-201ENST00000233468 HLA-AP01891 365 aaKnown RBP8.7□□□□□ -1.02
SF3B6-201ENST00000233468 SLC25A6P12236 298 aa8.7□□□□□ -1.02
SF3B6-201ENST00000233468 ASAH1Q13510 395 aa8.7□□□□□ -1.02
SF3B6-201ENST00000233468 SMCO1Q147U7 214 aa8.7□□□□□ -1.02
SF3B6-201ENST00000233468 RPEL1Q2QD12 228 aa8.7□□□□□ -1.02
SF3B6-201ENST00000233468 AARDQ4LEZ3 155 aa8.7□□□□□ -1.02
SF3B6-201ENST00000233468 KPRPQ5T749 579 aaPredicted RBP8.7□□□□□ -1.02
SF3B6-201ENST00000233468 C9orf66Q5T8R8 295 aa8.7□□□□□ -1.02
SF3B6-201ENST00000233468 NOXA1Q86UR1 476 aa8.7□□□□□ -1.02
SF3B6-201ENST00000233468 ZNF114Q8NC26 417 aa8.7□□□□□ -1.02
SF3B6-201ENST00000233468 LHFPL5Q8TAF8 219 aa8.7□□□□□ -1.02
SF3B6-201ENST00000233468 GPR146Q96CH1 333 aa8.7□□□□□ -1.02
SF3B6-201ENST00000233468 FANCD2OSQ96PS1 177 aa8.7□□□□□ -1.02
SF3B6-201ENST00000233468 ATP6V0BQ99437 205 aa8.7□□□□□ -1.02
SF3B6-201ENST00000233468 C20orf85Q9H1P6 137 aa8.7□□□□□ -1.02
SF3B6-201ENST00000233468 HIPK2Q9H2X6 1198 aa8.7□□□□□ -1.02
SF3B6-201ENST00000233468 C9orf170A2RU37 121 aa8.69□□□□□ -1.02
SF3B6-201ENST00000233468 CEBPZOSA8MTT3 80 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms