RNA–Protein interactions for RNA: ENST00000233027.9

NEK4-201, Transcript of NIMA related kinase 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK4, Length 6,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-201ENST00000233027 IGKV1D-8A0A087WSZ0 117 aa11.23□□□□□ -0.61
NEK4-201ENST00000233027 VSIRQ9H7M9 311 aa11.23□□□□□ -0.61
NEK4-201ENST00000233027 TSPAN13O95857 204 aa11.23□□□□□ -0.61
NEK4-201ENST00000233027 LRTM2Q8N967 370 aa11.23□□□□□ -0.61
NEK4-201ENST00000233027 OSR1Q8TAX0 266 aaPredicted RBP11.23□□□□□ -0.61
NEK4-201ENST00000233027 FBXL7Q9UJT9 491 aa11.23□□□□□ -0.61
NEK4-201ENST00000233027 GPR183P32249 361 aa11.23□□□□□ -0.61
NEK4-201ENST00000233027 CD69Q07108 199 aa11.23□□□□□ -0.61
NEK4-201ENST00000233027 C1QL4Q86Z23 238 aa11.23□□□□□ -0.61
NEK4-201ENST00000233027 DEPPQ9NTK1 212 aa11.23□□□□□ -0.61
NEK4-201ENST00000233027 ZNF319Q9P2F9 582 aa11.23□□□□□ -0.61
NEK4-201ENST00000233027 SAA2-SAA4A0A096LPE2 208 aa11.22□□□□□ -0.61
NEK4-201ENST00000233027 A0A1B0GUT8 65 aa11.22□□□□□ -0.61
NEK4-201ENST00000233027 SAA2P0DJI9 122 aaPredicted RBP11.22□□□□□ -0.61
NEK4-201ENST00000233027 GLRXP35754 106 aa11.22□□□□□ -0.61
NEK4-201ENST00000233027 PLAURQ03405 335 aa11.22□□□□□ -0.61
NEK4-201ENST00000233027 BSPH1Q075Z2 132 aa11.22□□□□□ -0.61
NEK4-201ENST00000233027 PAQR4Q8N4S7 273 aaPredicted RBP11.22□□□□□ -0.61
NEK4-201ENST00000233027 OR13C6PQ8NH95 151 aa11.22□□□□□ -0.61
NEK4-201ENST00000233027 DMRTA2Q96SC8 542 aa11.22□□□□□ -0.61
NEK4-201ENST00000233027 B9A039 149 aa11.22□□□□□ -0.61
NEK4-201ENST00000233027 UCNP55089 124 aa11.22□□□□□ -0.61
NEK4-201ENST00000233027 ATP5J2P56134 94 aa11.22□□□□□ -0.61
NEK4-201ENST00000233027 TIMM23BQ5SRD1 257 aa11.22□□□□□ -0.61
NEK4-201ENST00000233027 LHFPL4Q7Z7J7 247 aa11.22□□□□□ -0.61
NEK4-201ENST00000233027 VWCEQ96DN2 955 aa11.22□□□□□ -0.61
NEK4-201ENST00000233027 MRAP2Q96G30 205 aa11.22□□□□□ -0.61
NEK4-201ENST00000233027 SCGB3A1Q96QR1 104 aa11.22□□□□□ -0.61
NEK4-201ENST00000233027 CCL19Q99731 98 aa11.22□□□□□ -0.61
NEK4-201ENST00000233027 RALGAPA2Q2PPJ7 1873 aa11.22□□□□□ -0.61
NEK4-201ENST00000233027 SAA1P0DJI8 122 aaPredicted RBP11.22□□□□□ -0.61
NEK4-201ENST00000233027 SUMO2P61956 95 aaKnown RBP11.22□□□□□ -0.61
NEK4-201ENST00000233027 SNRPD3P62318 126 aaKnown RBP11.22□□□□□ -0.61
NEK4-201ENST00000233027 TRBV6-7A0A0A0MS04 114 aa11.22□□□□□ -0.61
NEK4-201ENST00000233027 F8VVB4 439 aa11.22□□□□□ -0.61
NEK4-201ENST00000233027 F8VWA3 439 aa11.22□□□□□ -0.61
NEK4-201ENST00000233027 J3QW42 95 aa11.22□□□□□ -0.61
NEK4-201ENST00000233027 CEACAM4O75871 244 aa11.22□□□□□ -0.61
NEK4-201ENST00000233027 APOBEC3AP31941 199 aaPredicted RBP11.22□□□□□ -0.61
NEK4-201ENST00000233027 RNASE4P34096 147 aaKnown RBP11.22□□□□□ -0.61
NEK4-201ENST00000233027 ZNF324BQ6AW86 544 aaPredicted RBP11.22□□□□□ -0.61
NEK4-201ENST00000233027 MESP1Q9BRJ9 268 aa11.22□□□□□ -0.61
NEK4-201ENST00000233027 NRN1Q9NPD7 142 aa11.22□□□□□ -0.61
NEK4-201ENST00000233027 CLEC19AQ6UXS0 136 aa11.21□□□□□ -0.61
NEK4-201ENST00000233027 CENPVQ7Z7K6 275 aaPredicted RBP11.21□□□□□ -0.61
NEK4-201ENST00000233027 TMEM170AQ8WVE7 144 aa11.21□□□□□ -0.61
NEK4-201ENST00000233027 TYMSP04818 313 aa11.21□□□□□ -0.61
NEK4-201ENST00000233027 ASIPP42127 132 aa11.21□□□□□ -0.61
NEK4-201ENST00000233027 FAM131CQ96AQ9 280 aa11.21□□□□□ -0.61
NEK4-201ENST00000233027 SFTPCP11686 197 aa11.21□□□□□ -0.61
NEK4-201ENST00000233027 CCL3L1P16619 93 aa11.21□□□□□ -0.61
NEK4-201ENST00000233027 TSPOP30536 169 aa11.21□□□□□ -0.61
NEK4-201ENST00000233027 TNFSF10P50591 281 aa11.21□□□□□ -0.61
NEK4-201ENST00000233027 ELOVL5Q9NYP7 299 aa11.21□□□□□ -0.61
NEK4-201ENST00000233027 TMEM262E9PQX1 116 aa11.21□□□□□ -0.62
NEK4-201ENST00000233027 UMODP07911 640 aa11.21□□□□□ -0.62
NEK4-201ENST00000233027 RAB9AP51151 201 aa11.21□□□□□ -0.62
NEK4-201ENST00000233027 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.21□□□□□ -0.62
NEK4-201ENST00000233027 WBP1Q96G27 269 aa11.21□□□□□ -0.62
NEK4-201ENST00000233027 IQCF6A8MYZ5 107 aa11.2□□□□□ -0.62
NEK4-201ENST00000233027 TM4SF5O14894 197 aa11.2□□□□□ -0.62
NEK4-201ENST00000233027 LEPP41159 167 aa11.2□□□□□ -0.62
NEK4-201ENST00000233027 ATP5IP56385 69 aaPredicted RBP11.2□□□□□ -0.62
NEK4-201ENST00000233027 PRR31Q5SQ13 230 aa11.2□□□□□ -0.62
NEK4-201ENST00000233027 A0A0G2JMZ2 1700 aa11.2□□□□□ -0.62
NEK4-201ENST00000233027 LRRC37A2A6NM11 1700 aa11.2□□□□□ -0.62
NEK4-201ENST00000233027 PYYP10082 97 aa11.2□□□□□ -0.62
NEK4-201ENST00000233027 PDLIM4P50479 330 aa11.2□□□□□ -0.62
NEK4-201ENST00000233027 NIT1Q86X76 327 aa11.2□□□□□ -0.62
NEK4-201ENST00000233027 FER1L6-AS1Q8NA97 138 aa11.2□□□□□ -0.62
NEK4-201ENST00000233027 FLVCR1-AS1Q8TAF5 88 aa11.2□□□□□ -0.62
NEK4-201ENST00000233027 ARPC1AQ92747 370 aa11.2□□□□□ -0.62
NEK4-201ENST00000233027 HIST1H2BKO60814 126 aa11.19□□□□□ -0.62
NEK4-201ENST00000233027 HIST1H2BJP06899 126 aa11.19□□□□□ -0.62
NEK4-201ENST00000233027 HIST1H2BOP23527 126 aa11.19□□□□□ -0.62
NEK4-201ENST00000233027 HIST1H2BBP33778 126 aa11.19□□□□□ -0.62
NEK4-201ENST00000233027 GAS1P54826 345 aa11.19□□□□□ -0.62
NEK4-201ENST00000233027 HIST1H2BDP58876 126 aa11.19□□□□□ -0.62
NEK4-201ENST00000233027 HIST1H2BCP62807 126 aa11.19□□□□□ -0.62
NEK4-201ENST00000233027 HIST2H2BEQ16778 126 aa11.19□□□□□ -0.62
NEK4-201ENST00000233027 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.19□□□□□ -0.62
NEK4-201ENST00000233027 FAM71F2Q6NXP2 309 aa11.19□□□□□ -0.62
NEK4-201ENST00000233027 HIST1H2BHQ93079 126 aa11.19□□□□□ -0.62
NEK4-201ENST00000233027 HIST1H2BNQ99877 126 aa11.19□□□□□ -0.62
NEK4-201ENST00000233027 HIST1H2BMQ99879 126 aa11.19□□□□□ -0.62
NEK4-201ENST00000233027 A0A1B0GWB2 263 aa11.19□□□□□ -0.62
NEK4-201ENST00000233027 APOMO95445 188 aa11.19□□□□□ -0.62
NEK4-201ENST00000233027 FGFBP3Q8TAT2 258 aa11.19□□□□□ -0.62
NEK4-201ENST00000233027 SPCS1Q9Y6A9 102 aa11.19□□□□□ -0.62
NEK4-201ENST00000233027 OR9G9P0C7N8 305 aa11.19□□□□□ -0.62
NEK4-201ENST00000233027 PPP1R27Q86WC6 154 aa11.19□□□□□ -0.62
NEK4-201ENST00000233027 TTC9CQ8N5M4 171 aa11.19□□□□□ -0.62
NEK4-201ENST00000233027 C9orf106Q8NAJ2 232 aa11.19□□□□□ -0.62
NEK4-201ENST00000233027 ZNF497Q6ZNH5 498 aa11.19□□□□□ -0.62
NEK4-201ENST00000233027 TUBA4BQ9H853 241 aa11.19□□□□□ -0.62
NEK4-201ENST00000233027 C21orf62Q9NYP8 219 aa11.19□□□□□ -0.62
NEK4-201ENST00000233027 FGF16O43320 207 aa11.18□□□□□ -0.62
NEK4-201ENST00000233027 LHX2P50458 406 aa11.18□□□□□ -0.62
NEK4-201ENST00000233027 BRWD3Q6RI45 1802 aa11.18□□□□□ -0.62
NEK4-201ENST00000233027 GFI1BQ5VTD9 330 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms