RNA–Protein interactions for RNA: ENST00000230480.10

VEGFA-201, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 993 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-201ENST00000230480 AKAIN1P0CW23 69 aa10.54□□□□□ -0.72
VEGFA-201ENST00000230480 HOXD3P31249 432 aaPredicted RBP10.54□□□□□ -0.72
VEGFA-201ENST00000230480 MAS1LP35410 378 aa10.54□□□□□ -0.72
VEGFA-201ENST00000230480 PIGPP57054 158 aa10.54□□□□□ -0.72
VEGFA-201ENST00000230480 WT1-ASQ06250 92 aa10.54□□□□□ -0.72
VEGFA-201ENST00000230480 SP6Q3SY56 376 aa10.54□□□□□ -0.72
VEGFA-201ENST00000230480 LPCAT3Q6P1A2 487 aa10.54□□□□□ -0.72
VEGFA-201ENST00000230480 ZNF343Q6P1L6 599 aa10.54□□□□□ -0.72
VEGFA-201ENST00000230480 IL34Q6ZMJ4 242 aa10.54□□□□□ -0.72
VEGFA-201ENST00000230480 OR51S1Q8NGJ8 323 aa10.54□□□□□ -0.72
VEGFA-201ENST00000230480 VSTM2AQ8TAG5 236 aa10.54□□□□□ -0.72
VEGFA-201ENST00000230480 RCC1LQ96I51 464 aaKnown RBP10.54□□□□□ -0.72
VEGFA-201ENST00000230480 ZNF436Q9C0F3 470 aaPredicted RBP10.54□□□□□ -0.72
VEGFA-201ENST00000230480 SLC2A8Q9NY64 477 aa10.54□□□□□ -0.72
VEGFA-201ENST00000230480 NAP1L6A6NFF2 107 aa10.53□□□□□ -0.72
VEGFA-201ENST00000230480 MFSD2BA6NFX1 497 aa10.53□□□□□ -0.72
VEGFA-201ENST00000230480 NPIPB5A8MRT5 1133 aa10.53□□□□□ -0.72
VEGFA-201ENST00000230480 B3GALNT1O75752 331 aa10.53□□□□□ -0.72
VEGFA-201ENST00000230480 SCO1O75880 301 aa10.53□□□□□ -0.72
VEGFA-201ENST00000230480 NDUFB8O95169 186 aa10.53□□□□□ -0.72
VEGFA-201ENST00000230480 FGF2P09038 288 aa10.53□□□□□ -0.72
VEGFA-201ENST00000230480 H2AFB2P0C5Z0 115 aa10.53□□□□□ -0.72
VEGFA-201ENST00000230480 PSMB6P28072 239 aa10.53□□□□□ -0.72
VEGFA-201ENST00000230480 ZNF616Q08AN1 781 aa10.53□□□□□ -0.72
VEGFA-201ENST00000230480 LGALSLQ3ZCW2 172 aaPredicted RBP10.53□□□□□ -0.72
VEGFA-201ENST00000230480 Q6ZRM9 215 aa10.53□□□□□ -0.72
VEGFA-201ENST00000230480 HSD17B13Q7Z5P4 300 aaPredicted RBP10.53□□□□□ -0.72
VEGFA-201ENST00000230480 CMTM1Q8IZ96 169 aa10.53□□□□□ -0.72
VEGFA-201ENST00000230480 EIF4E3Q8N5X7 224 aaKnown RBP10.53□□□□□ -0.72
VEGFA-201ENST00000230480 GLYATL2Q8WU03 294 aa10.53□□□□□ -0.72
VEGFA-201ENST00000230480 HRASLSQ9HDD0 168 aa10.53□□□□□ -0.72
VEGFA-201ENST00000230480 NDUFA4L2Q9NRX3 87 aa10.53□□□□□ -0.72
VEGFA-201ENST00000230480 AURKAIP1Q9NWT8 199 aaPredicted RBP10.53□□□□□ -0.72
VEGFA-201ENST00000230480 IGLV11-55A0A075B6I3 123 aa10.52□□□□□ -0.73
VEGFA-201ENST00000230480 WI2-2373I1.2A0A1W2PRP0 233 aa10.52□□□□□ -0.73
VEGFA-201ENST00000230480 K7EIL1 84 aa10.52□□□□□ -0.73
VEGFA-201ENST00000230480 MPC2O95563 127 aa10.52□□□□□ -0.73
VEGFA-201ENST00000230480 HSPB1P04792 205 aaKnown RBP10.52□□□□□ -0.73
VEGFA-201ENST00000230480 IFNA6P05013 189 aa10.52□□□□□ -0.73
VEGFA-201ENST00000230480 REG1AP05451 166 aa10.52□□□□□ -0.73
VEGFA-201ENST00000230480 UCP1P25874 307 aa10.52□□□□□ -0.73
VEGFA-201ENST00000230480 B2MP61769 119 aa10.52□□□□□ -0.73
VEGFA-201ENST00000230480 SUPT4H1P63272 117 aaKnown RBP10.52□□□□□ -0.73
VEGFA-201ENST00000230480 S100A12P80511 92 aa10.52□□□□□ -0.73
VEGFA-201ENST00000230480 FLI1Q01543 452 aaPredicted RBP10.52□□□□□ -0.73
VEGFA-201ENST00000230480 MEF2DQ14814 521 aa10.52□□□□□ -0.73
VEGFA-201ENST00000230480 SCGB2B2Q4G0G5 96 aa10.52□□□□□ -0.73
VEGFA-201ENST00000230480 OR11H4Q8NGC9 324 aa10.52□□□□□ -0.73
VEGFA-201ENST00000230480 SPIN2AQ99865 258 aa10.52□□□□□ -0.73
VEGFA-201ENST00000230480 SPIN2BQ9BPZ2 258 aa10.52□□□□□ -0.73
VEGFA-201ENST00000230480 TMEM14BQ9NUH8 114 aa10.52□□□□□ -0.73
VEGFA-201ENST00000230480 NUDT15Q9NV35 164 aa10.52□□□□□ -0.73
VEGFA-201ENST00000230480 COA4Q9NYJ1 87 aa10.52□□□□□ -0.73
VEGFA-201ENST00000230480 PFDN2Q9UHV9 154 aa10.52□□□□□ -0.73
VEGFA-201ENST00000230480 LINC01619G3V211 115 aa10.51□□□□□ -0.73
VEGFA-201ENST00000230480 H0Y980 276 aa10.51□□□□□ -0.73
VEGFA-201ENST00000230480 OR2J3O76001 311 aa10.51□□□□□ -0.73
VEGFA-201ENST00000230480 GIPP09681 153 aaPredicted RBP10.51□□□□□ -0.73
VEGFA-201ENST00000230480 PGAM2P15259 253 aa10.51□□□□□ -0.73
VEGFA-201ENST00000230480 RHOGP84095 191 aa10.51□□□□□ -0.73
VEGFA-201ENST00000230480 KLF5Q13887 457 aaPredicted RBP10.51□□□□□ -0.73
VEGFA-201ENST00000230480 OPCMLQ14982 345 aa10.51□□□□□ -0.73
VEGFA-201ENST00000230480 TOMM5Q8N4H5 51 aa10.51□□□□□ -0.73
VEGFA-201ENST00000230480 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.51□□□□□ -0.73
VEGFA-201ENST00000230480 ASB13Q8WXK3 278 aa10.51□□□□□ -0.73
VEGFA-201ENST00000230480 CCDC140Q96MF4 163 aa10.51□□□□□ -0.73
VEGFA-201ENST00000230480 PHB2Q99623 299 aa10.51□□□□□ -0.73
VEGFA-201ENST00000230480 ZNF355PQ9NSJ1 428 aa10.51□□□□□ -0.73
VEGFA-201ENST00000230480 PRR13Q9NZ81 148 aa10.51□□□□□ -0.73
VEGFA-201ENST00000230480 ZNF257Q9Y2Q1 563 aa10.51□□□□□ -0.73
VEGFA-201ENST00000230480 COL7A1Q02388 2944 aa10.51□□□□□ -0.73
VEGFA-201ENST00000230480 C3orf85A0A1B0GTC6 90 aa10.5□□□□□ -0.73
VEGFA-201ENST00000230480 BMPR1BO00238 502 aa10.5□□□□□ -0.73
VEGFA-201ENST00000230480 TSPAN4O14817 238 aa10.5□□□□□ -0.73
VEGFA-201ENST00000230480 CDS2O95674 445 aa10.5□□□□□ -0.73
VEGFA-201ENST00000230480 RAP2BP61225 183 aa10.5□□□□□ -0.73
VEGFA-201ENST00000230480 SURF2Q15527 256 aaPredicted RBP10.5□□□□□ -0.73
VEGFA-201ENST00000230480 ADAMTSL5Q6ZMM2 481 aa10.5□□□□□ -0.73
VEGFA-201ENST00000230480 DMBX1Q8NFW5 382 aa10.5□□□□□ -0.73
VEGFA-201ENST00000230480 S4R3C0 116 aa10.5□□□□□ -0.73
VEGFA-201ENST00000230480 HUWE1Q7Z6Z7 4374 aaKnown RBP10.49□□□□□ -0.73
VEGFA-201ENST00000230480 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.49□□□□□ -0.73
VEGFA-201ENST00000230480 CRYM-AS1A6NIL9 109 aa10.49□□□□□ -0.73
VEGFA-201ENST00000230480 C15orf61A6NNL5 157 aa10.49□□□□□ -0.73
VEGFA-201ENST00000230480 DISC1C4P0D8 188 aa10.49□□□□□ -0.73
VEGFA-201ENST00000230480 F8W735 103 aaPredicted RBP10.49□□□□□ -0.73
VEGFA-201ENST00000230480 SSNA1O43805 119 aa10.49□□□□□ -0.73
VEGFA-201ENST00000230480 CREBL2O60519 120 aaPredicted RBP10.49□□□□□ -0.73
VEGFA-201ENST00000230480 ACTL6BO94805 426 aa10.49□□□□□ -0.73
VEGFA-201ENST00000230480 OR5AC1P0C628 307 aa10.49□□□□□ -0.73
VEGFA-201ENST00000230480 OR8U8P0C7N1 319 aa10.49□□□□□ -0.73
VEGFA-201ENST00000230480 EDN2P20800 178 aa10.49□□□□□ -0.73
VEGFA-201ENST00000230480 SELENOHQ8IZQ5 122 aaKnown RBP10.49□□□□□ -0.73
VEGFA-201ENST00000230480 LINC00518Q8N0U6 118 aa10.49□□□□□ -0.73
VEGFA-201ENST00000230480 SCARB1Q8WTV0 552 aa10.49□□□□□ -0.73
VEGFA-201ENST00000230480 USMG5Q96IX5 58 aa10.49□□□□□ -0.73
VEGFA-201ENST00000230480 QTRT1Q9BXR0 403 aaKnown RBP10.49□□□□□ -0.73
VEGFA-201ENST00000230480 NAA60Q9H7X0 242 aa10.49□□□□□ -0.73
VEGFA-201ENST00000230480 TRAV6A0A075B6T7 132 aa10.48□□□□□ -0.73
VEGFA-201ENST00000230480 TEX13DA0A0J9YY54 714 aaPredicted RBP10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms