RNA–Protein interactions for RNA: ENST00000229239.9

GAPDH-201, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GAPDH, Length 1,875 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-201ENST00000229239 IGHV1-8P0DP01 117 aa13.7□□□□□ -0.22
GAPDH-201ENST00000229239 RHOBP62745 196 aa13.7□□□□□ -0.22
GAPDH-201ENST00000229239 RPL8P62917 257 aaKnown RBP13.7□□□□□ -0.22
GAPDH-201ENST00000229239 ERHP84090 104 aaKnown RBP13.7□□□□□ -0.22
GAPDH-201ENST00000229239 ELOBQ15370 118 aa13.7□□□□□ -0.22
GAPDH-201ENST00000229239 ARSJQ5FYB0 599 aaPredicted RBP13.7□□□□□ -0.22
GAPDH-201ENST00000229239 TMEM144Q7Z5S9 345 aa13.7□□□□□ -0.22
GAPDH-201ENST00000229239 MRPL41Q8IXM3 137 aaKnown RBP13.7□□□□□ -0.22
GAPDH-201ENST00000229239 OR4F5Q8NH21 305 aa13.7□□□□□ -0.22
GAPDH-201ENST00000229239 OR4F4Q96R69 305 aa13.7□□□□□ -0.22
GAPDH-201ENST00000229239 TMPRSS5Q9H3S3 457 aa13.7□□□□□ -0.22
GAPDH-201ENST00000229239 ZNRD1Q9P1U0 126 aa13.7□□□□□ -0.22
GAPDH-201ENST00000229239 GRNP28799 593 aaKnown RBP13.69□□□□□ -0.22
GAPDH-201ENST00000229239 LGALS7P47929 136 aa13.69□□□□□ -0.22
GAPDH-201ENST00000229239 ERVFRD-1P60508 538 aa13.69□□□□□ -0.22
GAPDH-201ENST00000229239 B2MP61769 119 aa13.69□□□□□ -0.22
GAPDH-201ENST00000229239 SLC35E1Q96K37 410 aa13.69□□□□□ -0.22
GAPDH-201ENST00000229239 hCG_1809904A0A1W2PP81 198 aa13.68□□□□□ -0.22
GAPDH-201ENST00000229239 A0A1W2PR64 198 aa13.68□□□□□ -0.22
GAPDH-201ENST00000229239 A0A1W2PRV1 198 aa13.68□□□□□ -0.22
GAPDH-201ENST00000229239 HMGB3O15347 200 aaKnown RBP13.68□□□□□ -0.22
GAPDH-201ENST00000229239 PLAUP00749 431 aa13.68□□□□□ -0.22
GAPDH-201ENST00000229239 GPX4P36969 197 aaPredicted RBP13.68□□□□□ -0.22
GAPDH-201ENST00000229239 PRRX1P54821 245 aa13.68□□□□□ -0.22
GAPDH-201ENST00000229239 TGIF2LXQ8IUE1 241 aa13.68□□□□□ -0.22
GAPDH-201ENST00000229239 LINC00518Q8N0U6 118 aa13.68□□□□□ -0.22
GAPDH-201ENST00000229239 PNKDQ8N490 385 aa13.68□□□□□ -0.22
GAPDH-201ENST00000229239 HINT2Q9BX68 163 aa13.68□□□□□ -0.22
GAPDH-201ENST00000229239 TMEM133Q9H2Q1 129 aa13.68□□□□□ -0.22
GAPDH-201ENST00000229239 NDUFA4L2Q9NRX3 87 aa13.68□□□□□ -0.22
GAPDH-201ENST00000229239 ARL2-SNX15V9GYD0 113 aa13.68□□□□□ -0.22
GAPDH-201ENST00000229239 ADGRG4Q8IZF6 3080 aa13.68□□□□□ -0.22
GAPDH-201ENST00000229239 C5orf52A6NGY3 159 aa13.67□□□□□ -0.22
GAPDH-201ENST00000229239 C11orf94C9JXX5 98 aa13.67□□□□□ -0.22
GAPDH-201ENST00000229239 PAGE4O60829 102 aa13.67□□□□□ -0.22
GAPDH-201ENST00000229239 SUB1P53999 127 aaKnown RBP eCLIP13.67□□□□□ -0.222e-10■■□□□ 12.3
GAPDH-201ENST00000229239 VMA21Q3ZAQ7 101 aa13.67□□□□□ -0.22
GAPDH-201ENST00000229239 IQCF2Q8IXL9 164 aa13.67□□□□□ -0.22
GAPDH-201ENST00000229239 ZFP82Q8N141 532 aa13.67□□□□□ -0.22
GAPDH-201ENST00000229239 C1orf159Q96HA4 380 aa13.67□□□□□ -0.22
GAPDH-201ENST00000229239 METTL1Q9UBP6 276 aaKnown RBP13.67□□□□□ -0.22
GAPDH-201ENST00000229239 YLPM1P49750 1951 aaKnown RBP13.67□□□□□ -0.22
GAPDH-201ENST00000229239 TET2Q6N021 2002 aaPredicted RBP13.67□□□□□ -0.22
GAPDH-201ENST00000229239 CLN5O75503 358 aa13.67□□□□□ -0.22
GAPDH-201ENST00000229239 IGHV2-70P01814 119 aa13.67□□□□□ -0.22
GAPDH-201ENST00000229239 PRR20EP86478 221 aa13.67□□□□□ -0.22
GAPDH-201ENST00000229239 PRR20CP86479 221 aa13.67□□□□□ -0.22
GAPDH-201ENST00000229239 PRR20DP86480 221 aa13.67□□□□□ -0.22
GAPDH-201ENST00000229239 PRR20BP86481 221 aa13.67□□□□□ -0.22
GAPDH-201ENST00000229239 PRR20AP86496 221 aa13.67□□□□□ -0.22
GAPDH-201ENST00000229239 MIC13Q5XKP0 118 aa13.67□□□□□ -0.22
GAPDH-201ENST00000229239 C2CD4CQ8TF44 421 aa13.67□□□□□ -0.22
GAPDH-201ENST00000229239 ANAPC16Q96DE5 110 aa13.67□□□□□ -0.22
GAPDH-201ENST00000229239 PARLQ9H300 379 aa13.67□□□□□ -0.22
GAPDH-201ENST00000229239 TRBV24-1A0A075B6N3 115 aa13.66□□□□□ -0.22
GAPDH-201ENST00000229239 UBE2CO00762 179 aa13.66□□□□□ -0.22
GAPDH-201ENST00000229239 SIAH2O43255 324 aa13.66□□□□□ -0.22
GAPDH-201ENST00000229239 S100A8P05109 93 aa13.66□□□□□ -0.22
GAPDH-201ENST00000229239 RPS10P46783 165 aaKnown RBP13.66□□□□□ -0.22
GAPDH-201ENST00000229239 C11orf42Q8N5U0 333 aa13.66□□□□□ -0.22
GAPDH-201ENST00000229239 STPG3Q8N7X2 389 aa13.66□□□□□ -0.22
GAPDH-201ENST00000229239 Q8WTZ3 238 aa13.66□□□□□ -0.22
GAPDH-201ENST00000229239 TCEAL7Q9BRU2 100 aa13.66□□□□□ -0.22
GAPDH-201ENST00000229239 RAB1BQ9H0U4 201 aa13.66□□□□□ -0.22
GAPDH-201ENST00000229239 DOK5Q9P104 306 aa13.66□□□□□ -0.22
GAPDH-201ENST00000229239 RNASE2P10153 161 aaKnown RBP13.65□□□□□ -0.22
GAPDH-201ENST00000229239 SSX2Q16385 188 aa13.65□□□□□ -0.22
GAPDH-201ENST00000229239 HLA-DRB5Q30154 266 aa13.65□□□□□ -0.22
GAPDH-201ENST00000229239 GCSAMLQ5JQS6 135 aa13.65□□□□□ -0.22
GAPDH-201ENST00000229239 SPNS3Q6ZMD2 512 aa13.65□□□□□ -0.22
GAPDH-201ENST00000229239 C8orf46Q8TAG6 207 aa13.65□□□□□ -0.22
GAPDH-201ENST00000229239 RNASEH2CQ8TDP1 164 aaKnown RBP13.65□□□□□ -0.22
GAPDH-201ENST00000229239 PATZ1Q9HBE1 687 aaKnown RBP13.65□□□□□ -0.22
GAPDH-201ENST00000229239 LRBAP50851 2863 aa13.65□□□□□ -0.22
GAPDH-201ENST00000229239 EIF3GO75821 320 aaKnown RBP eCLIP13.65□□□□□ -0.226e-12■■□□□ 13.2
GAPDH-201ENST00000229239 MYOD1P15172 320 aa13.65□□□□□ -0.22
GAPDH-201ENST00000229239 ZNF841Q6ZN19 808 aa13.65□□□□□ -0.22
GAPDH-201ENST00000229239 RPUSD4Q96CM3 377 aaKnown RBP13.65□□□□□ -0.22
GAPDH-201ENST00000229239 CHODLQ9H9P2 273 aa13.65□□□□□ -0.22
GAPDH-201ENST00000229239 MIOXQ9UGB7 285 aa13.65□□□□□ -0.22
GAPDH-201ENST00000229239 SLC45A2Q9UMX9 530 aa13.65□□□□□ -0.22
GAPDH-201ENST00000229239 C19orf84I3L1E1 186 aa13.64□□□□□ -0.23
GAPDH-201ENST00000229239 CD99P14209 185 aa13.64□□□□□ -0.23
GAPDH-201ENST00000229239 REG1BP48304 166 aa13.64□□□□□ -0.23
GAPDH-201ENST00000229239 AKR1D1P51857 326 aa13.64□□□□□ -0.23
GAPDH-201ENST00000229239 SNRPEP62304 92 aaKnown RBP13.64□□□□□ -0.23
GAPDH-201ENST00000229239 RPL23P62829 140 aaKnown RBP13.64□□□□□ -0.23
GAPDH-201ENST00000229239 CD69Q07108 199 aa13.64□□□□□ -0.23
GAPDH-201ENST00000229239 ADIRFQ15847 76 aa13.64□□□□□ -0.23
GAPDH-201ENST00000229239 ZNF674Q2M3X9 581 aa13.64□□□□□ -0.23
GAPDH-201ENST00000229239 ARFGEF3Q5TH69 2177 aa13.64□□□□□ -0.23
GAPDH-201ENST00000229239 TEX45Q8NA69 505 aa13.64□□□□□ -0.23
GAPDH-201ENST00000229239 BEND2Q8NDZ0 799 aa13.64□□□□□ -0.23
GAPDH-201ENST00000229239 GATAD1Q8WUU5 269 aa13.64□□□□□ -0.23
GAPDH-201ENST00000229239 BTF3L4Q96K17 158 aa13.64□□□□□ -0.23
GAPDH-201ENST00000229239 RNF2Q99496 336 aa13.64□□□□□ -0.23
GAPDH-201ENST00000229239 AMMECR1Q9Y4X0 333 aaPredicted RBP13.64□□□□□ -0.23
GAPDH-201ENST00000229239 PKDREJQ9NTG1 2253 aa13.64□□□□□ -0.23
GAPDH-201ENST00000229239 AP4M1O00189 453 aa13.63□□□□□ -0.23
GAPDH-201ENST00000229239 IGLV2-23P01705 113 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms