RNA–Protein interactions for RNA: ENST00000227503.13

SF1-201, Transcript of splicing factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SF1, Length 2,850 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-201ENST00000227503 C1orf210Q8IVY1 113 aa11.63□□□□□ -0.55
SF1-201ENST00000227503 RAB1CQ92928 201 aa11.63□□□□□ -0.55
SF1-201ENST00000227503 NUDT11Q96G61 164 aa11.63□□□□□ -0.55
SF1-201ENST00000227503 C1orf159Q96HA4 380 aa11.63□□□□□ -0.55
SF1-201ENST00000227503 OR8B2Q96RD0 313 aa11.63□□□□□ -0.55
SF1-201ENST00000227503 MEGF9Q9H1U4 602 aa11.63□□□□□ -0.55
SF1-201ENST00000227503 C12orf49Q9H741 205 aa11.63□□□□□ -0.55
SF1-201ENST00000227503 AHCTF1Q8WYP5 2266 aa11.62□□□□□ -0.55
SF1-201ENST00000227503 SAA2-SAA4A0A096LPE2 208 aa11.62□□□□□ -0.55
SF1-201ENST00000227503 PSPNO60542 156 aa11.62□□□□□ -0.55
SF1-201ENST00000227503 RAC2P15153 192 aa11.62□□□□□ -0.55
SF1-201ENST00000227503 ERVK11-1P61568 191 aa11.62□□□□□ -0.55
SF1-201ENST00000227503 MOB1BQ7L9L4 216 aa11.62□□□□□ -0.55
SF1-201ENST00000227503 FAM216AQ8WUB2 273 aa11.62□□□□□ -0.55
SF1-201ENST00000227503 PMCHL2Q9BQD1 86 aa11.62□□□□□ -0.55
SF1-201ENST00000227503 NAA38Q9BRA0 125 aaKnown RBP11.62□□□□□ -0.55
SF1-201ENST00000227503 C12orf77C9JDV5 145 aa11.62□□□□□ -0.55
SF1-201ENST00000227503 CDIPTO14735 213 aa11.62□□□□□ -0.55
SF1-201ENST00000227503 AMY1AP04745 511 aa11.62□□□□□ -0.55
SF1-201ENST00000227503 NPY1RP25929 384 aa11.62□□□□□ -0.55
SF1-201ENST00000227503 GABRA2P47869 451 aa11.62□□□□□ -0.55
SF1-201ENST00000227503 CAMPP49913 170 aa11.62□□□□□ -0.55
SF1-201ENST00000227503 PSG5Q15238 335 aa11.62□□□□□ -0.55
SF1-201ENST00000227503 STPG3Q8N7X2 389 aa11.62□□□□□ -0.55
SF1-201ENST00000227503 OR2D3Q8NGH3 330 aa11.62□□□□□ -0.55
SF1-201ENST00000227503 HES4Q9HCC6 221 aa11.62□□□□□ -0.55
SF1-201ENST00000227503 ABI3Q9P2A4 366 aa11.62□□□□□ -0.55
SF1-201ENST00000227503 SPACA3Q8IXA5 215 aa11.61□□□□□ -0.55
SF1-201ENST00000227503 SCCPDHQ8NBX0 429 aa11.61□□□□□ -0.55
SF1-201ENST00000227503 DCTN5Q9BTE1 182 aa11.61□□□□□ -0.55
SF1-201ENST00000227503 ICE1Q9Y2F5 2266 aa11.61□□□□□ -0.55
SF1-201ENST00000227503 TRAV8-6A0A0B4J262 113 aa11.61□□□□□ -0.55
SF1-201ENST00000227503 RNF212BA8MTL3 300 aa11.61□□□□□ -0.55
SF1-201ENST00000227503 H0YJW9 148 aa11.61□□□□□ -0.55
SF1-201ENST00000227503 RAB29O14966 203 aa11.61□□□□□ -0.55
SF1-201ENST00000227503 MEOX1P50221 254 aa11.61□□□□□ -0.55
SF1-201ENST00000227503 UBE2G1P62253 170 aa11.61□□□□□ -0.55
SF1-201ENST00000227503 PRR27Q6MZM9 219 aa11.61□□□□□ -0.55
SF1-201ENST00000227503 PSG11Q9UQ72 335 aa11.61□□□□□ -0.55
SF1-201ENST00000227503 ZNF318Q5VUA4 2279 aa11.61□□□□□ -0.55
SF1-201ENST00000227503 TRAV9-1A0A075B6T8 112 aa11.61□□□□□ -0.55
SF1-201ENST00000227503 A0A087X0K7 114 aa11.61□□□□□ -0.55
SF1-201ENST00000227503 WNT9BO14905 357 aa11.61□□□□□ -0.55
SF1-201ENST00000227503 MYOD1P15172 320 aa11.61□□□□□ -0.55
SF1-201ENST00000227503 OPRK1P41145 380 aa11.61□□□□□ -0.55
SF1-201ENST00000227503 PSG9Q00887 426 aa11.61□□□□□ -0.55
SF1-201ENST00000227503 IBA57Q5T440 356 aaKnown RBP11.61□□□□□ -0.55
SF1-201ENST00000227503 WDR73Q6P4I2 378 aa11.61□□□□□ -0.55
SF1-201ENST00000227503 C19orf35Q6ZS72 473 aa11.61□□□□□ -0.55
SF1-201ENST00000227503 MOB3BQ86TA1 216 aa11.61□□□□□ -0.55
SF1-201ENST00000227503 OR2T6Q8NHC8 308 aa11.61□□□□□ -0.55
SF1-201ENST00000227503 RTL8AQ9BWD3 113 aa11.61□□□□□ -0.55
SF1-201ENST00000227503 MBNL3Q9NUK0 354 aaKnown RBP11.61□□□□□ -0.55
SF1-201ENST00000227503 PTPRBP23467 1997 aa11.6□□□□□ -0.55
SF1-201ENST00000227503 TRGV10A0A0A0MS01 117 aa11.6□□□□□ -0.55
SF1-201ENST00000227503 TRBV9A0A0B4J1U6 114 aa11.6□□□□□ -0.55
SF1-201ENST00000227503 GAGE12BA1L429 117 aa11.6□□□□□ -0.55
SF1-201ENST00000227503 GRPP07492 148 aa11.6□□□□□ -0.55
SF1-201ENST00000227503 SP1P08047 785 aa11.6□□□□□ -0.55
SF1-201ENST00000227503 TCTAP57738 103 aa11.6□□□□□ -0.55
SF1-201ENST00000227503 PCNX2A6NKB5 2137 aa11.6□□□□□ -0.55
SF1-201ENST00000227503 OR4C46A6NHA9 309 aa11.6□□□□□ -0.55
SF1-201ENST00000227503 C2orf70A6NJV1 201 aa11.6□□□□□ -0.55
SF1-201ENST00000227503 C21orf140B9A014 251 aa11.6□□□□□ -0.55
SF1-201ENST00000227503 FCGR3BO75015 233 aa11.6□□□□□ -0.55
SF1-201ENST00000227503 HBZP02008 142 aa11.6□□□□□ -0.55
SF1-201ENST00000227503 MFAP2P55001 183 aa11.6□□□□□ -0.55
SF1-201ENST00000227503 FOXA3P55318 350 aaPredicted RBP11.6□□□□□ -0.55
SF1-201ENST00000227503 LRRC10Q5BKY1 277 aa11.6□□□□□ -0.55
SF1-201ENST00000227503 BVES-AS1Q5T3Y7 98 aa11.6□□□□□ -0.55
SF1-201ENST00000227503 OR52E5Q8NH55 327 aa11.6□□□□□ -0.55
SF1-201ENST00000227503 ZNF355PQ9NSJ1 428 aa11.6□□□□□ -0.55
SF1-201ENST00000227503 CORTO00230 105 aa11.59□□□□□ -0.55
SF1-201ENST00000227503 MT-ND6P03923 174 aa11.59□□□□□ -0.55
SF1-201ENST00000227503 IGFBP2P18065 325 aa11.59□□□□□ -0.55
SF1-201ENST00000227503 RHOGP84095 191 aa11.59□□□□□ -0.55
SF1-201ENST00000227503 ALKBH6Q3KRA9 238 aa11.59□□□□□ -0.55
SF1-201ENST00000227503 MDS2Q8NDY4 140 aa11.59□□□□□ -0.55
SF1-201ENST00000227503 SGK494Q96LW2 274 aa11.59□□□□□ -0.55
SF1-201ENST00000227503 TNFRSF19Q9NS68 423 aa11.59□□□□□ -0.55
SF1-201ENST00000227503 LAMA5O15230 3695 aa11.59□□□□□ -0.55
SF1-201ENST00000227503 C9JCJ5 164 aa11.59□□□□□ -0.55
SF1-201ENST00000227503 CATR1Q13166 79 aa11.59□□□□□ -0.55
SF1-201ENST00000227503 ZNF146Q15072 292 aa11.59□□□□□ -0.55
SF1-201ENST00000227503 PRAMEF5Q5TYX0 476 aa11.59□□□□□ -0.55
SF1-201ENST00000227503 PRAMEF6Q5VXH4 476 aa11.59□□□□□ -0.55
SF1-201ENST00000227503 ZNF826PQ6ZT77 177 aa11.59□□□□□ -0.55
SF1-201ENST00000227503 Q8IYB0 196 aa11.59□□□□□ -0.55
SF1-201ENST00000227503 OR5B3Q8NH48 314 aa11.59□□□□□ -0.55
SF1-201ENST00000227503 Q8TCH9 128 aa11.59□□□□□ -0.55
SF1-201ENST00000227503 NANOS1Q8WY41 292 aaKnown RBP11.59□□□□□ -0.55
SF1-201ENST00000227503 GALMQ96C23 342 aa11.59□□□□□ -0.55
SF1-201ENST00000227503 HLA-DQA1P01909 254 aa11.58□□□□□ -0.56
SF1-201ENST00000227503 ZNF883P0CG24 379 aa11.58□□□□□ -0.56
SF1-201ENST00000227503 TIGITQ495A1 244 aa11.58□□□□□ -0.56
SF1-201ENST00000227503 Q6ZR03 302 aa11.58□□□□□ -0.56
SF1-201ENST00000227503 OR8B3Q8NGG8 313 aa11.58□□□□□ -0.56
SF1-201ENST00000227503 HSD17B10Q99714 261 aaKnown RBP11.58□□□□□ -0.56
SF1-201ENST00000227503 HINT2Q9BX68 163 aa11.58□□□□□ -0.56
SF1-201ENST00000227503 ZNF331Q9NQX6 463 aaPredicted RBP11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms