RNA–Protein interactions for RNA: ENST00000222823.8

NOD1-201, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOD1, Length 4,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-201ENST00000222823 CCL3L1P16619 93 aa9.66□□□□□ -0.86
NOD1-201ENST00000222823 IGFBP2P18065 325 aa9.66□□□□□ -0.86
NOD1-201ENST00000222823 TCTAP57738 103 aa9.66□□□□□ -0.86
NOD1-201ENST00000222823 FGFBP3Q8TAT2 258 aa9.66□□□□□ -0.86
NOD1-201ENST00000222823 FOXG1P55316 489 aaPredicted RBP9.66□□□□□ -0.86
NOD1-201ENST00000222823 ICAM4Q14773 271 aa9.66□□□□□ -0.86
NOD1-201ENST00000222823 EEF1AKMT3Q96AZ1 226 aa9.66□□□□□ -0.86
NOD1-201ENST00000222823 COL25A1Q9BXS0 654 aaPredicted RBP9.66□□□□□ -0.86
NOD1-201ENST00000222823 PHF3Q92576 2039 aaKnown RBP9.65□□□□□ -0.86
NOD1-201ENST00000222823 CIDEAO60543 219 aa9.65□□□□□ -0.86
NOD1-201ENST00000222823 ZNF25P17030 456 aaPredicted RBP9.65□□□□□ -0.86
NOD1-201ENST00000222823 RELQ04864 619 aaPredicted RBP9.65□□□□□ -0.86
NOD1-201ENST00000222823 PMCHL1Q16048 86 aa9.65□□□□□ -0.86
NOD1-201ENST00000222823 ZCCHC24Q8N2G6 241 aaKnown RBP9.65□□□□□ -0.86
NOD1-201ENST00000222823 RNF126Q9BV68 326 aa9.65□□□□□ -0.86
NOD1-201ENST00000222823 KIF26AQ9ULI4 1882 aaPredicted RBP9.65□□□□□ -0.86
NOD1-201ENST00000222823 CGAP01215 116 aa9.65□□□□□ -0.86
NOD1-201ENST00000222823 CRYGSP22914 178 aa9.65□□□□□ -0.86
NOD1-201ENST00000222823 CDX1P47902 265 aaPredicted RBP9.65□□□□□ -0.86
NOD1-201ENST00000222823 TFF3Q07654 80 aa9.65□□□□□ -0.86
NOD1-201ENST00000222823 WDR82Q6UXN9 313 aa9.65□□□□□ -0.86
NOD1-201ENST00000222823 TCF24Q7RTU0 167 aa9.65□□□□□ -0.86
NOD1-201ENST00000222823 OR1N2Q8NGR9 330 aa9.65□□□□□ -0.86
NOD1-201ENST00000222823 CACNG8Q8WXS5 425 aa9.65□□□□□ -0.86
NOD1-201ENST00000222823 MRPL20Q9BYC9 149 aaKnown RBP9.65□□□□□ -0.86
NOD1-201ENST00000222823 THADAQ6YHU6 1953 aa9.65□□□□□ -0.86
NOD1-201ENST00000222823 ACACBO00763 2458 aa9.65□□□□□ -0.86
NOD1-201ENST00000222823 IGKV3D-15A0A087WSY6 115 aa9.65□□□□□ -0.87
NOD1-201ENST00000222823 IGKV3-15P01624 115 aa9.65□□□□□ -0.87
NOD1-201ENST00000222823 AMY1AP04745 511 aa9.65□□□□□ -0.87
NOD1-201ENST00000222823 GPX1P07203 203 aa9.65□□□□□ -0.87
NOD1-201ENST00000222823 SAPCD1Q5SSQ6 148 aa9.65□□□□□ -0.87
NOD1-201ENST00000222823 CLDND2Q8NHS1 167 aa9.65□□□□□ -0.87
NOD1-201ENST00000222823 PTPRQQ9UMZ3 2332 aa9.64□□□□□ -0.87
NOD1-201ENST00000222823 TRAV24A0A0B4J272 114 aa9.64□□□□□ -0.87
NOD1-201ENST00000222823 OR4C46A6NHA9 309 aa9.64□□□□□ -0.87
NOD1-201ENST00000222823 NPIPB6E9PJ23 425 aa9.64□□□□□ -0.87
NOD1-201ENST00000222823 LCN2P80188 198 aa9.64□□□□□ -0.87
NOD1-201ENST00000222823 MBNL2Q5VZF2 373 aaKnown RBP9.64□□□□□ -0.87
NOD1-201ENST00000222823 ZNF525Q8N782 197 aa9.64□□□□□ -0.87
NOD1-201ENST00000222823 SYT8Q8NBV8 401 aa9.64□□□□□ -0.87
NOD1-201ENST00000222823 GRIFINA4D1Z8 144 aa9.64□□□□□ -0.87
NOD1-201ENST00000222823 YPEL1O60688 119 aa9.64□□□□□ -0.87
NOD1-201ENST00000222823 IGKV1D-33P01593 117 aa9.64□□□□□ -0.87
NOD1-201ENST00000222823 IGKV1-33P01594 117 aa9.64□□□□□ -0.87
NOD1-201ENST00000222823 SRP19P09132 144 aaKnown RBP9.64□□□□□ -0.87
NOD1-201ENST00000222823 YPEL2Q96QA6 119 aa9.64□□□□□ -0.87
NOD1-201ENST00000222823 MAP1LC3AQ9H492 121 aa9.64□□□□□ -0.87
NOD1-201ENST00000222823 CARHSP1Q9Y2V2 147 aaKnown RBP9.64□□□□□ -0.87
NOD1-201ENST00000222823 S4R3C0 116 aa9.64□□□□□ -0.87
NOD1-201ENST00000222823 IGHV3OR16-12A0A075B7B8 117 aa9.64□□□□□ -0.87
NOD1-201ENST00000222823 ZNF385CQ66K41 422 aaPredicted RBP9.64□□□□□ -0.87
NOD1-201ENST00000222823 IGKV1D-8A0A087WSZ0 117 aa9.64□□□□□ -0.87
NOD1-201ENST00000222823 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.64□□□□□ -0.87
NOD1-201ENST00000222823 H0YIZ8 118 aa9.64□□□□□ -0.87
NOD1-201ENST00000222823 TRGV3P03979 118 aa9.64□□□□□ -0.87
NOD1-201ENST00000222823 COL5A1-AS1Q5SY13 56 aa9.64□□□□□ -0.87
NOD1-201ENST00000222823 PET117Q6UWS5 81 aa9.64□□□□□ -0.87
NOD1-201ENST00000222823 CENPVQ7Z7K6 275 aaPredicted RBP9.64□□□□□ -0.87
NOD1-201ENST00000222823 ZNF524Q96C55 264 aa9.64□□□□□ -0.87
NOD1-201ENST00000222823 ELOVL1Q9BW60 279 aa9.64□□□□□ -0.87
NOD1-201ENST00000222823 C21orf62Q9NYP8 219 aa9.64□□□□□ -0.87
NOD1-201ENST00000222823 C2orf16Q68DN1 1984 aa9.63□□□□□ -0.87
NOD1-201ENST00000222823 IGHV3-49A0A0A0MS15 119 aa9.63□□□□□ -0.87
NOD1-201ENST00000222823 A0A0A6YYD4 124 aa9.63□□□□□ -0.87
NOD1-201ENST00000222823 RPLP1P05386 114 aaKnown RBP9.63□□□□□ -0.87
NOD1-201ENST00000222823 CBLN1P23435 193 aa9.63□□□□□ -0.87
NOD1-201ENST00000222823 CCL19Q99731 98 aa9.63□□□□□ -0.87
NOD1-201ENST00000222823 REG4Q9BYZ8 158 aa9.63□□□□□ -0.87
NOD1-201ENST00000222823 SPRR3Q9UBC9 169 aa9.63□□□□□ -0.87
NOD1-201ENST00000222823 SPG11Q96JI7 2443 aa9.63□□□□□ -0.87
NOD1-201ENST00000222823 IGKV1-12A0A0C4DH73 117 aa9.63□□□□□ -0.87
NOD1-201ENST00000222823 IGKV1D-12P01611 117 aa9.63□□□□□ -0.87
NOD1-201ENST00000222823 AREGP15514 252 aa9.63□□□□□ -0.87
NOD1-201ENST00000222823 SRSF4Q08170 494 aaKnown RBP9.63□□□□□ -0.87
NOD1-201ENST00000222823 GGNQ86UU5 652 aa9.63□□□□□ -0.87
NOD1-201ENST00000222823 FBXL7Q9UJT9 491 aa9.63□□□□□ -0.87
NOD1-201ENST00000222823 ZFHX2Q9C0A1 2572 aaPredicted RBP9.63□□□□□ -0.87
NOD1-201ENST00000222823 FOXI3A8MTJ6 420 aaPredicted RBP9.63□□□□□ -0.87
NOD1-201ENST00000222823 F8VVB4 439 aa9.63□□□□□ -0.87
NOD1-201ENST00000222823 F8VWA3 439 aa9.63□□□□□ -0.87
NOD1-201ENST00000222823 HAX1O00165 279 aa9.63□□□□□ -0.87
NOD1-201ENST00000222823 GATA2P23769 480 aaPredicted RBP9.63□□□□□ -0.87
NOD1-201ENST00000222823 QRFPP83859 136 aa9.63□□□□□ -0.87
NOD1-201ENST00000222823 ID3Q02535 119 aa9.63□□□□□ -0.87
NOD1-201ENST00000222823 SMAGPQ0VAQ4 97 aa9.63□□□□□ -0.87
NOD1-201ENST00000222823 ZNF497Q6ZNH5 498 aa9.63□□□□□ -0.87
NOD1-201ENST00000222823 BIVMQ86UB2 503 aa9.63□□□□□ -0.87
NOD1-201ENST00000222823 RNASE6Q93091 150 aaKnown RBP9.63□□□□□ -0.87
NOD1-201ENST00000222823 FOXA2Q9Y261 457 aaPredicted RBP9.63□□□□□ -0.87
NOD1-201ENST00000222823 TRBV9A0A0B4J1U6 114 aa9.62□□□□□ -0.87
NOD1-201ENST00000222823 CRXO43186 299 aaPredicted RBP9.62□□□□□ -0.87
NOD1-201ENST00000222823 TMEM144Q7Z5S9 345 aa9.62□□□□□ -0.87
NOD1-201ENST00000222823 FOLR2P14207 255 aa9.62□□□□□ -0.87
NOD1-201ENST00000222823 DLX6P56179 175 aa9.62□□□□□ -0.87
NOD1-201ENST00000222823 MORN2Q502X0 79 aa9.62□□□□□ -0.87
NOD1-201ENST00000222823 FAM53AQ6NSI3 398 aaPredicted RBP9.62□□□□□ -0.87
NOD1-201ENST00000222823 OR10AG1Q8NH19 301 aa9.62□□□□□ -0.87
NOD1-201ENST00000222823 OR52E5Q8NH55 327 aa9.62□□□□□ -0.87
NOD1-201ENST00000222823 WFIKKN1Q96NZ8 548 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms