RNA–Protein interactions for RNA: ENST00000221232.9

CNOT3-201, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT3, Length 2,852 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-201ENST00000221232 FAM222BQ8WU58 562 aa11.93□□□□□ -0.5
CNOT3-201ENST00000221232 RPUSD1Q9UJJ7 312 aaKnown RBP11.93□□□□□ -0.5
CNOT3-201ENST00000221232 ABCA1O95477 2261 aa11.93□□□□□ -0.5
CNOT3-201ENST00000221232 K7EN84 100 aa11.93□□□□□ -0.5
CNOT3-201ENST00000221232 NUPR1O60356 82 aa11.93□□□□□ -0.5
CNOT3-201ENST00000221232 GZMBP10144 247 aa11.93□□□□□ -0.5
CNOT3-201ENST00000221232 CRYBB3P26998 211 aa11.93□□□□□ -0.5
CNOT3-201ENST00000221232 TMPRSS3P57727 454 aa11.93□□□□□ -0.5
CNOT3-201ENST00000221232 SLC35B1P78383 322 aa11.93□□□□□ -0.5
CNOT3-201ENST00000221232 RTL8BQ17RB0 113 aa11.93□□□□□ -0.5
CNOT3-201ENST00000221232 DOLPP1Q86YN1 238 aa11.93□□□□□ -0.5
CNOT3-201ENST00000221232 MRPL41Q8IXM3 137 aaKnown RBP11.93□□□□□ -0.5
CNOT3-201ENST00000221232 ABHD17AQ96GS6 310 aa11.93□□□□□ -0.5
CNOT3-201ENST00000221232 NABP2Q9BQ15 211 aa11.93□□□□□ -0.5
CNOT3-201ENST00000221232 NBASA2RRP1 2371 aa11.93□□□□□ -0.5
CNOT3-201ENST00000221232 IGHV3-72A0A0B4J1Y9 119 aa11.93□□□□□ -0.5
CNOT3-201ENST00000221232 TRGV8A0A0C4DH27 118 aa11.93□□□□□ -0.5
CNOT3-201ENST00000221232 UPK2O00526 184 aa11.93□□□□□ -0.5
CNOT3-201ENST00000221232 DVL1O14640 695 aa11.93□□□□□ -0.5
CNOT3-201ENST00000221232 FCN3O75636 299 aa11.93□□□□□ -0.5
CNOT3-201ENST00000221232 LINC00869P0C866 280 aa11.93□□□□□ -0.5
CNOT3-201ENST00000221232 GATA4P43694 442 aa11.93□□□□□ -0.5
CNOT3-201ENST00000221232 IGFL3Q6UXB1 125 aa11.93□□□□□ -0.5
CNOT3-201ENST00000221232 TMEM108Q6UXF1 575 aa11.93□□□□□ -0.5
CNOT3-201ENST00000221232 OR10G8Q8NGN5 311 aa11.93□□□□□ -0.5
CNOT3-201ENST00000221232 FAM57AQ8TBR7 257 aa11.93□□□□□ -0.5
CNOT3-201ENST00000221232 NEUROG1Q92886 237 aa11.93□□□□□ -0.5
CNOT3-201ENST00000221232 HARBI1Q96MB7 349 aa11.93□□□□□ -0.5
CNOT3-201ENST00000221232 SFXN3Q9BWM7 321 aa11.93□□□□□ -0.5
CNOT3-201ENST00000221232 TRAV5A0A0B4J249 113 aa11.92□□□□□ -0.5
CNOT3-201ENST00000221232 hADV38S2A0JD32 116 aa11.92□□□□□ -0.5
CNOT3-201ENST00000221232 CRYABP02511 175 aaKnown RBP11.92□□□□□ -0.5
CNOT3-201ENST00000221232 SFTPCP11686 197 aa11.92□□□□□ -0.5
CNOT3-201ENST00000221232 CBLN1P23435 193 aa11.92□□□□□ -0.5
CNOT3-201ENST00000221232 ZNF90Q03938 601 aa11.92□□□□□ -0.5
CNOT3-201ENST00000221232 ADIPOQQ15848 244 aa11.92□□□□□ -0.5
CNOT3-201ENST00000221232 RAI1Q7Z5J4 1906 aaPredicted RBP11.92□□□□□ -0.5
CNOT3-201ENST00000221232 C16orf97H3BN30 126 aa11.92□□□□□ -0.5
CNOT3-201ENST00000221232 CEACAM8P31997 349 aaPredicted RBP11.92□□□□□ -0.5
CNOT3-201ENST00000221232 CNN1P51911 297 aaKnown RBP11.92□□□□□ -0.5
CNOT3-201ENST00000221232 SSBP2P81877 361 aaPredicted RBP11.92□□□□□ -0.5
CNOT3-201ENST00000221232 SLC25A48Q6ZT89 311 aaKnown RBP11.92□□□□□ -0.5
CNOT3-201ENST00000221232 PRNDQ9UKY0 176 aa11.92□□□□□ -0.5
CNOT3-201ENST00000221232 CSMD1Q96PZ7 3565 aa11.92□□□□□ -0.5
CNOT3-201ENST00000221232 REG1AP05451 166 aa11.91□□□□□ -0.5
CNOT3-201ENST00000221232 TMEM200BQ69YZ2 307 aa11.91□□□□□ -0.5
CNOT3-201ENST00000221232 CEP295Q9C0D2 2601 aa11.91□□□□□ -0.5
CNOT3-201ENST00000221232 ERVFC1-1P60608 527 aa11.91□□□□□ -0.5
CNOT3-201ENST00000221232 SUMO1P63165 101 aaKnown RBP11.91□□□□□ -0.5
CNOT3-201ENST00000221232 FXYD3Q14802 87 aa11.91□□□□□ -0.5
CNOT3-201ENST00000221232 TEX38Q6PEX7 206 aa11.91□□□□□ -0.5
CNOT3-201ENST00000221232 NHLRC2Q8NBF2 726 aa11.91□□□□□ -0.5
CNOT3-201ENST00000221232 ELOVL5Q9NYP7 299 aa11.91□□□□□ -0.5
CNOT3-201ENST00000221232 GATCO43716 136 aaKnown RBP11.9□□□□□ -0.5
CNOT3-201ENST00000221232 RPL29P47914 159 aaKnown RBP11.9□□□□□ -0.5
CNOT3-201ENST00000221232 RELQ04864 619 aaPredicted RBP11.9□□□□□ -0.5
CNOT3-201ENST00000221232 PRR30Q53SZ7 412 aaPredicted RBP11.9□□□□□ -0.5
CNOT3-201ENST00000221232 MORN5Q5VZ52 161 aa11.9□□□□□ -0.5
CNOT3-201ENST00000221232 OR10X1Q8NGY0 326 aa11.9□□□□□ -0.5
CNOT3-201ENST00000221232 ADTRPQ96IZ2 230 aa11.9□□□□□ -0.5
CNOT3-201ENST00000221232 TMEM68Q96MH6 324 aa11.9□□□□□ -0.5
CNOT3-201ENST00000221232 COMMD5Q9GZQ3 224 aa11.9□□□□□ -0.5
CNOT3-201ENST00000221232 SAP30LQ9HAJ7 183 aa11.9□□□□□ -0.5
CNOT3-201ENST00000221232 RAB9BQ9NP90 201 aa11.9□□□□□ -0.5
CNOT3-201ENST00000221232 ZNF318Q5VUA4 2279 aa11.9□□□□□ -0.5
CNOT3-201ENST00000221232 A0A087X0M5 115 aa11.9□□□□□ -0.5
CNOT3-201ENST00000221232 A0A1B0GX30 115 aa11.9□□□□□ -0.5
CNOT3-201ENST00000221232 C17orf100A8MU93 164 aa11.9□□□□□ -0.5
CNOT3-201ENST00000221232 PRRG2O14669 202 aa11.9□□□□□ -0.5
CNOT3-201ENST00000221232 ENSAO43768 121 aaKnown RBP11.9□□□□□ -0.5
CNOT3-201ENST00000221232 ADMP35318 185 aa11.9□□□□□ -0.5
CNOT3-201ENST00000221232 TCL1AP56279 114 aa11.9□□□□□ -0.5
CNOT3-201ENST00000221232 PRR20EP86478 221 aa11.9□□□□□ -0.5
CNOT3-201ENST00000221232 PRR20CP86479 221 aa11.9□□□□□ -0.5
CNOT3-201ENST00000221232 PRR20DP86480 221 aa11.9□□□□□ -0.5
CNOT3-201ENST00000221232 PRR20BP86481 221 aa11.9□□□□□ -0.5
CNOT3-201ENST00000221232 PRR20AP86496 221 aa11.9□□□□□ -0.5
CNOT3-201ENST00000221232 PRCDQ00LT1 54 aa11.9□□□□□ -0.5
CNOT3-201ENST00000221232 PQLC2Q6ZP29 291 aa11.9□□□□□ -0.5
CNOT3-201ENST00000221232 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.9□□□□□ -0.5
CNOT3-201ENST00000221232 C14orf144Q96I85 54 aa11.9□□□□□ -0.5
CNOT3-201ENST00000221232 SLC45A2Q9UMX9 530 aa11.9□□□□□ -0.5
CNOT3-201ENST00000221232 SPTA1P02549 2419 aa11.9□□□□□ -0.51
CNOT3-201ENST00000221232 RPL15P61313 204 aaKnown RBP11.89□□□□□ -0.51
CNOT3-201ENST00000221232 JOSD1Q15040 202 aaPredicted RBP11.89□□□□□ -0.51
CNOT3-201ENST00000221232 RITA1Q96K30 269 aa11.89□□□□□ -0.51
CNOT3-201ENST00000221232 RNASE7Q9H1E1 156 aaKnown RBP11.89□□□□□ -0.51
CNOT3-201ENST00000221232 IGHV3-21A0A0B4J1V1 117 aa11.89□□□□□ -0.51
CNOT3-201ENST00000221232 NKX6-3A6NJ46 265 aa11.89□□□□□ -0.51
CNOT3-201ENST00000221232 PLAUP00749 431 aa11.89□□□□□ -0.51
CNOT3-201ENST00000221232 ZNF664Q8N3J9 261 aa11.89□□□□□ -0.51
CNOT3-201ENST00000221232 LINC00479Q96M42 142 aa11.89□□□□□ -0.51
CNOT3-201ENST00000221232 UHRF2Q96PU4 802 aa11.89□□□□□ -0.51
CNOT3-201ENST00000221232 THBDP07204 575 aa11.89□□□□□ -0.51
CNOT3-201ENST00000221232 TNFRSF1AP19438 455 aa11.89□□□□□ -0.51
CNOT3-201ENST00000221232 DDTP30046 118 aa11.89□□□□□ -0.51
CNOT3-201ENST00000221232 LGALS4P56470 323 aa11.89□□□□□ -0.51
CNOT3-201ENST00000221232 GFRALQ6UXV0 394 aa11.89□□□□□ -0.51
CNOT3-201ENST00000221232 C19orf35Q6ZS72 473 aa11.89□□□□□ -0.51
CNOT3-201ENST00000221232 ZNF503Q96F45 646 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms