RNA–Protein interactions for RNA: ENST00000221222.15

HOMER3-201, Transcript of homer scaffold protein 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene HOMER3, Length 1,384 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-201ENST00000221222 IFNA21P01568 189 aa18.36■□□□□ 0.53
HOMER3-201ENST00000221222 NSUN5P1Q3KNT7 163 aa18.36■□□□□ 0.53
HOMER3-201ENST00000221222 C12orf45Q8N5I9 185 aaPredicted RBP18.36■□□□□ 0.53
HOMER3-201ENST00000221222 SNRPGP15A8MWD9 76 aa18.35■□□□□ 0.53
HOMER3-201ENST00000221222 C2orf68Q2NKX9 166 aa18.35■□□□□ 0.53
HOMER3-201ENST00000221222 C19orf35Q6ZS72 473 aa18.35■□□□□ 0.53
HOMER3-201ENST00000221222 OR2C3Q8N628 320 aa18.35■□□□□ 0.53
HOMER3-201ENST00000221222 FANCD2OSQ96PS1 177 aa18.35■□□□□ 0.53
HOMER3-201ENST00000221222 HSPB7Q9UBY9 170 aa18.35■□□□□ 0.53
HOMER3-201ENST00000221222 A0A1W2PRX2 142 aa18.34■□□□□ 0.53
HOMER3-201ENST00000221222 PRH1P02810 166 aa18.34■□□□□ 0.53
HOMER3-201ENST00000221222 RGS21Q2M5E4 152 aa18.34■□□□□ 0.53
HOMER3-201ENST00000221222 SPINK9Q5DT21 86 aa18.34■□□□□ 0.53
HOMER3-201ENST00000221222 OR1S1Q8NH92 325 aa18.34■□□□□ 0.53
HOMER3-201ENST00000221222 F11RQ9Y624 299 aaKnown RBP18.34■□□□□ 0.53
HOMER3-201ENST00000221222 FAM223BA6NKX1 122 aa18.33■□□□□ 0.53
HOMER3-201ENST00000221222 M0QZ24 198 aa18.33■□□□□ 0.53
HOMER3-201ENST00000221222 DEFA4P12838 97 aa18.33■□□□□ 0.53
HOMER3-201ENST00000221222 HIST1H1BP16401 226 aaKnown RBP18.33■□□□□ 0.53
HOMER3-201ENST00000221222 ERHP84090 104 aaKnown RBP18.33■□□□□ 0.53
HOMER3-201ENST00000221222 TNFRSF9Q07011 255 aa18.33■□□□□ 0.53
HOMER3-201ENST00000221222 TREML4Q6UXN2 200 aa18.33■□□□□ 0.53
HOMER3-201ENST00000221222 C18orf65Q6ZTR6 163 aa18.33■□□□□ 0.53
HOMER3-201ENST00000221222 FAM223AQ8IWN6 122 aa18.33■□□□□ 0.53
HOMER3-201ENST00000221222 ZNF114Q8NC26 417 aa18.33■□□□□ 0.53
HOMER3-201ENST00000221222 NECAP1Q8NC96 275 aa18.33■□□□□ 0.53
HOMER3-201ENST00000221222 KLHL30-AS1Q8NEE0 82 aa18.33■□□□□ 0.53
HOMER3-201ENST00000221222 C4orf3Q8WVX3 66 aa18.33■□□□□ 0.53
HOMER3-201ENST00000221222 USMG5Q96IX5 58 aa18.33■□□□□ 0.53
HOMER3-201ENST00000221222 IGLV11-55A0A075B6I3 123 aa18.32■□□□□ 0.52
HOMER3-201ENST00000221222 A0A0G2JLM5 398 aa18.32■□□□□ 0.52
HOMER3-201ENST00000221222 MPTX1A8MV57 137 aa18.32■□□□□ 0.52
HOMER3-201ENST00000221222 FAM90A26D6RGX4 464 aa18.32■□□□□ 0.52
HOMER3-201ENST00000221222 RHOGP84095 191 aa18.32■□□□□ 0.52
HOMER3-201ENST00000221222 RUNX1Q01196 453 aa18.32■□□□□ 0.52
HOMER3-201ENST00000221222 OR1L6Q8NGR2 347 aa18.32■□□□□ 0.52
HOMER3-201ENST00000221222 GNB4Q9HAV0 340 aa18.32■□□□□ 0.52
HOMER3-201ENST00000221222 DMRT1Q9Y5R6 373 aa18.32■□□□□ 0.52
HOMER3-201ENST00000221222 VWFP04275 2813 aa18.32■□□□□ 0.52
HOMER3-201ENST00000221222 NUDT19A8MXV4 375 aa18.31■□□□□ 0.52
HOMER3-201ENST00000221222 HOXA1P49639 335 aaPredicted RBP18.31■□□□□ 0.52
HOMER3-201ENST00000221222 UXS1Q8NBZ7 420 aa18.31■□□□□ 0.52
HOMER3-201ENST00000221222 OR1P1Q8NH06 330 aa18.31■□□□□ 0.52
HOMER3-201ENST00000221222 P2RX4Q99571 388 aa18.31■□□□□ 0.52
HOMER3-201ENST00000221222 ENY2Q9NPA8 101 aa18.31■□□□□ 0.52
HOMER3-201ENST00000221222 CYB5BO43169 146 aa18.3■□□□□ 0.52
HOMER3-201ENST00000221222 OR2J3O76001 311 aa18.3■□□□□ 0.52
HOMER3-201ENST00000221222 NXPH3O95157 252 aa18.3■□□□□ 0.52
HOMER3-201ENST00000221222 MFAP2P55001 183 aa18.3■□□□□ 0.52
HOMER3-201ENST00000221222 C8orf86Q6ZUL3 223 aa18.3■□□□□ 0.52
HOMER3-201ENST00000221222 OR4F17Q8NGA8 305 aa18.3■□□□□ 0.52
HOMER3-201ENST00000221222 OR4F4Q96R69 305 aa18.3■□□□□ 0.52
HOMER3-201ENST00000221222 FBXL7Q9UJT9 491 aa18.3■□□□□ 0.52
HOMER3-201ENST00000221222 C13orf42A0A1B0GVH6 325 aa18.3■□□□□ 0.52
HOMER3-201ENST00000221222 C7orf66A4D0T2 115 aa18.3■□□□□ 0.52
HOMER3-201ENST00000221222 CEBPZOSA8MTT3 80 aa18.3■□□□□ 0.52
HOMER3-201ENST00000221222 I3L521 148 aa18.3■□□□□ 0.52
HOMER3-201ENST00000221222 DEFA5Q01523 94 aa18.3■□□□□ 0.52
HOMER3-201ENST00000221222 OXA1LQ15070 435 aa18.3■□□□□ 0.52
HOMER3-201ENST00000221222 TATDN3Q17R31 274 aa18.3■□□□□ 0.52
HOMER3-201ENST00000221222 OR4D5Q8NGN0 318 aa18.3■□□□□ 0.52
HOMER3-201ENST00000221222 OR10C1Q96KK4 312 aa18.3■□□□□ 0.52
HOMER3-201ENST00000221222 WNK1Q9H4A3 2382 aa18.29■□□□□ 0.52
HOMER3-201ENST00000221222 TSPAN15O95858 294 aa18.29■□□□□ 0.52
HOMER3-201ENST00000221222 LGALS1P09382 135 aaKnown RBP18.29■□□□□ 0.52
HOMER3-201ENST00000221222 IAH1Q2TAA2 248 aaPredicted RBP18.29■□□□□ 0.52
HOMER3-201ENST00000221222 BSXQ3C1V8 233 aa18.29■□□□□ 0.52
HOMER3-201ENST00000221222 RBKSQ9H477 322 aa18.29■□□□□ 0.52
HOMER3-201ENST00000221222 THYN1Q9P016 225 aa18.29■□□□□ 0.52
HOMER3-201ENST00000221222 CCSO14618 274 aa18.28■□□□□ 0.52
HOMER3-201ENST00000221222 NDUFB8O95169 186 aa18.28■□□□□ 0.52
HOMER3-201ENST00000221222 IGHV3-11P01762 117 aa18.28■□□□□ 0.52
HOMER3-201ENST00000221222 SNCAP37840 140 aa18.28■□□□□ 0.52
HOMER3-201ENST00000221222 ID3Q02535 119 aa18.28■□□□□ 0.52
HOMER3-201ENST00000221222 ATP5G2Q06055 141 aa18.28■□□□□ 0.52
HOMER3-201ENST00000221222 C15orf32Q32M92 178 aa18.28■□□□□ 0.52
HOMER3-201ENST00000221222 PVRIGQ6DKI7 326 aa18.28■□□□□ 0.52
HOMER3-201ENST00000221222 SLC25A24Q6NUK1 477 aa18.28■□□□□ 0.52
HOMER3-201ENST00000221222 DTD1Q8TEA8 209 aa18.28■□□□□ 0.52
HOMER3-201ENST00000221222 OR5B12Q96R08 314 aa18.28■□□□□ 0.52
HOMER3-201ENST00000221222 HEYLQ9NQ87 328 aaPredicted RBP18.28■□□□□ 0.52
HOMER3-201ENST00000221222 MED6O75586 246 aa18.27■□□□□ 0.51
HOMER3-201ENST00000221222 RNASE2P10153 161 aaKnown RBP18.27■□□□□ 0.51
HOMER3-201ENST00000221222 SUB1P53999 127 aaKnown RBP eCLIP18.27■□□□□ 0.51
HOMER3-201ENST00000221222 ZNF343Q6P1L6 599 aa18.27■□□□□ 0.51
HOMER3-201ENST00000221222 ZBTB8BQ8NAP8 495 aaPredicted RBP18.27■□□□□ 0.51
HOMER3-201ENST00000221222 HIPK2Q9H2X6 1198 aa18.27■□□□□ 0.51
HOMER3-201ENST00000221222 CMYA5Q8N3K9 4069 aa18.27■□□□□ 0.51
HOMER3-201ENST00000221222 HTR2BP41595 481 aa18.26■□□□□ 0.51
HOMER3-201ENST00000221222 ETV3LQ6ZN32 361 aa18.26■□□□□ 0.51
HOMER3-201ENST00000221222 RAX2Q96IS3 184 aa18.26■□□□□ 0.51
HOMER3-201ENST00000221222 DEFA6Q01524 100 aa18.25■□□□□ 0.51
HOMER3-201ENST00000221222 EXOSC2Q13868 293 aaKnown RBP18.25■□□□□ 0.51
HOMER3-201ENST00000221222 DEFB136Q30KP8 78 aa18.25■□□□□ 0.51
HOMER3-201ENST00000221222 CXorf58Q96LI9 332 aa18.25■□□□□ 0.51
HOMER3-201ENST00000221222 C2orf50Q96LR7 162 aa18.25■□□□□ 0.51
HOMER3-201ENST00000221222 C5orf51A6NDU8 294 aa18.24■□□□□ 0.51
HOMER3-201ENST00000221222 SYNGR2O43760 224 aa18.24■□□□□ 0.51
HOMER3-201ENST00000221222 MYCNOSP40205 109 aa18.24■□□□□ 0.51
HOMER3-201ENST00000221222 NKX2-1P43699 371 aaPredicted RBP18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms