RNA–Protein interactions for RNA: ENST00000219837.11

KNOP1-201, Transcript of lysine rich nucleolar protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene KNOP1, Length 6,432 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNOP1-201ENST00000219837 SPACA3Q8IXA5 215 aa9.32□□□□□ -0.92
KNOP1-201ENST00000219837 RNASEH2CQ8TDP1 164 aaKnown RBP9.32□□□□□ -0.92
KNOP1-201ENST00000219837 PARD6GQ9BYG4 376 aaPredicted RBP9.32□□□□□ -0.92
KNOP1-201ENST00000219837 A0A0G2JK05 382 aa9.32□□□□□ -0.92
KNOP1-201ENST00000219837 FHITP49789 147 aa9.32□□□□□ -0.92
KNOP1-201ENST00000219837 VMO1Q7Z5L0 202 aa9.32□□□□□ -0.92
KNOP1-201ENST00000219837 FER1L6-AS1Q8NA97 138 aa9.32□□□□□ -0.92
KNOP1-201ENST00000219837 OR9G4Q8NGQ1 327 aa9.32□□□□□ -0.92
KNOP1-201ENST00000219837 C1QTNF5Q9BXJ0 243 aa9.32□□□□□ -0.92
KNOP1-201ENST00000219837 PPP1R3EQ9H7J1 279 aa9.32□□□□□ -0.92
KNOP1-201ENST00000219837 ZFC3H1O60293 1989 aaKnown RBP9.32□□□□□ -0.92
KNOP1-201ENST00000219837 TRAV14DV4A0A0A6YYC5 116 aa9.32□□□□□ -0.92
KNOP1-201ENST00000219837 TMEM14DPA8MWL7 114 aa9.32□□□□□ -0.92
KNOP1-201ENST00000219837 UMODP07911 640 aa9.32□□□□□ -0.92
KNOP1-201ENST00000219837 CYB5R2Q6BCY4 276 aa9.32□□□□□ -0.92
KNOP1-201ENST00000219837 AICDAQ9GZX7 198 aa9.32□□□□□ -0.92
KNOP1-201ENST00000219837 SLC17A3O00476 420 aa9.32□□□□□ -0.92
KNOP1-201ENST00000219837 SAP30O75446 220 aa9.32□□□□□ -0.92
KNOP1-201ENST00000219837 CCL3L1P16619 93 aa9.32□□□□□ -0.92
KNOP1-201ENST00000219837 LHX2P50458 406 aa9.32□□□□□ -0.92
KNOP1-201ENST00000219837 LEMD1Q68G75 181 aa9.32□□□□□ -0.92
KNOP1-201ENST00000219837 TRAV40A0A0B4J280 105 aa9.32□□□□□ -0.92
KNOP1-201ENST00000219837 CBLN1P23435 193 aa9.32□□□□□ -0.92
KNOP1-201ENST00000219837 LRTM2Q8N967 370 aa9.32□□□□□ -0.92
KNOP1-201ENST00000219837 APCDD1LQ8NCL9 501 aa9.32□□□□□ -0.92
KNOP1-201ENST00000219837 JKAMPQ9P055 326 aa9.32□□□□□ -0.92
KNOP1-201ENST00000219837 RALGAPA2Q2PPJ7 1873 aa9.32□□□□□ -0.92
KNOP1-201ENST00000219837 TMEM250H0YL14 139 aa9.31□□□□□ -0.92
KNOP1-201ENST00000219837 IGHV4-39P01824 125 aa9.31□□□□□ -0.92
KNOP1-201ENST00000219837 MYOD1P15172 320 aa9.31□□□□□ -0.92
KNOP1-201ENST00000219837 CD33P20138 364 aa9.31□□□□□ -0.92
KNOP1-201ENST00000219837 IL36BQ9NZH7 164 aa9.31□□□□□ -0.92
KNOP1-201ENST00000219837 C8orf46Q8TAG6 207 aa9.31□□□□□ -0.92
KNOP1-201ENST00000219837 PHLDA1Q8WV24 401 aaPredicted RBP9.31□□□□□ -0.92
KNOP1-201ENST00000219837 KCNS1Q96KK3 526 aa9.31□□□□□ -0.92
KNOP1-201ENST00000219837 ST20Q9HBF5 79 aa9.31□□□□□ -0.92
KNOP1-201ENST00000219837 SLC25A20O43772 301 aa9.31□□□□□ -0.92
KNOP1-201ENST00000219837 PSG7Q13046 419 aa9.31□□□□□ -0.92
KNOP1-201ENST00000219837 GATA2P23769 480 aaPredicted RBP9.31□□□□□ -0.92
KNOP1-201ENST00000219837 FAM90A1Q86YD7 464 aa9.31□□□□□ -0.92
KNOP1-201ENST00000219837 TM2D1Q9BX74 207 aa9.31□□□□□ -0.92
KNOP1-201ENST00000219837 SNAI2O43623 268 aa9.31□□□□□ -0.92
KNOP1-201ENST00000219837 PRB4P10163 310 aaPredicted RBP9.31□□□□□ -0.92
KNOP1-201ENST00000219837 ZNF324BQ6AW86 544 aaPredicted RBP9.31□□□□□ -0.92
KNOP1-201ENST00000219837 NXT2Q9NPJ8 142 aaKnown RBP9.31□□□□□ -0.92
KNOP1-201ENST00000219837 IGHV1-18A0A0C4DH31 117 aa9.3□□□□□ -0.92
KNOP1-201ENST00000219837 FOXA3P55318 350 aaPredicted RBP9.3□□□□□ -0.92
KNOP1-201ENST00000219837 ERVK11-1P61568 191 aa9.3□□□□□ -0.92
KNOP1-201ENST00000219837 ASCL4Q6XD76 172 aa9.3□□□□□ -0.92
KNOP1-201ENST00000219837 OTORQ9NRC9 128 aa9.3□□□□□ -0.92
KNOP1-201ENST00000219837 ATG2BQ96BY7 2078 aa9.3□□□□□ -0.92
KNOP1-201ENST00000219837 BRCA1P38398 1863 aaKnown RBP9.3□□□□□ -0.92
KNOP1-201ENST00000219837 DTX2Q86UW9 622 aa9.3□□□□□ -0.92
KNOP1-201ENST00000219837 FAM89BQ8N5H3 189 aa9.3□□□□□ -0.92
KNOP1-201ENST00000219837 H2BFSP57053 126 aa9.3□□□□□ -0.92
KNOP1-201ENST00000219837 GGACTQ9BVM4 153 aa9.3□□□□□ -0.92
KNOP1-201ENST00000219837 SOX21Q9Y651 276 aaPredicted RBP9.3□□□□□ -0.92
KNOP1-201ENST00000219837 LOC285556D6RIA3 1793 aa9.3□□□□□ -0.92
KNOP1-201ENST00000219837 GNLYP22749 145 aa9.3□□□□□ -0.92
KNOP1-201ENST00000219837 ATP5IP56385 69 aaPredicted RBP9.3□□□□□ -0.92
KNOP1-201ENST00000219837 LINC01590Q5TEZ4 76 aa9.3□□□□□ -0.92
KNOP1-201ENST00000219837 MRPS18CQ9Y3D5 142 aaKnown RBP9.3□□□□□ -0.92
KNOP1-201ENST00000219837 ATP5G3P48201 142 aa9.3□□□□□ -0.92
KNOP1-201ENST00000219837 C2orf68Q2NKX9 166 aa9.3□□□□□ -0.92
KNOP1-201ENST00000219837 GATAD1Q8WUU5 269 aa9.3□□□□□ -0.92
KNOP1-201ENST00000219837 PQLC2LA1A4F0 135 aa9.29□□□□□ -0.92
KNOP1-201ENST00000219837 OR11H12B2RN74 326 aa9.29□□□□□ -0.92
KNOP1-201ENST00000219837 SAMD13Q5VXD3 122 aa9.29□□□□□ -0.92
KNOP1-201ENST00000219837 LHFPL4Q7Z7J7 247 aa9.29□□□□□ -0.92
KNOP1-201ENST00000219837 OR11H1Q8NG94 326 aa9.29□□□□□ -0.92
KNOP1-201ENST00000219837 OR11H2Q8NH07 326 aa9.29□□□□□ -0.92
KNOP1-201ENST00000219837 ARID1BQ8NFD5 2236 aaPredicted RBP9.29□□□□□ -0.92
KNOP1-201ENST00000219837 TRAV12-3A0A0B4J271 114 aa9.29□□□□□ -0.92
KNOP1-201ENST00000219837 GPX4P36969 197 aaPredicted RBP9.29□□□□□ -0.92
KNOP1-201ENST00000219837 TMEM95Q3KNT9 176 aa9.29□□□□□ -0.92
KNOP1-201ENST00000219837 SIGLEC15Q6ZMC9 328 aa9.29□□□□□ -0.92
KNOP1-201ENST00000219837 PLPPR1Q8TBJ4 325 aa9.29□□□□□ -0.92
KNOP1-201ENST00000219837 WDR90Q96KV7 1748 aa9.29□□□□□ -0.92
KNOP1-201ENST00000219837 ADARB2-AS1A8MUL3 147 aa9.29□□□□□ -0.92
KNOP1-201ENST00000219837 TGFBR3LH3BV60 316 aa9.29□□□□□ -0.92
KNOP1-201ENST00000219837 ATP5LO75964 103 aa9.29□□□□□ -0.92
KNOP1-201ENST00000219837 ST6GALNAC6Q969X2 333 aa9.29□□□□□ -0.92
KNOP1-201ENST00000219837 WNT2P09544 360 aa9.29□□□□□ -0.92
KNOP1-201ENST00000219837 SRSF7Q16629 238 aaKnown RBP eCLIP9.29□□□□□ -0.92
KNOP1-201ENST00000219837 GFI1BQ5VTD9 330 aa9.29□□□□□ -0.92
KNOP1-201ENST00000219837 PUSL1Q8N0Z8 303 aaKnown RBP9.29□□□□□ -0.92
KNOP1-201ENST00000219837 OR5A1Q8NGJ0 315 aa9.29□□□□□ -0.92
KNOP1-201ENST00000219837 ZNF837Q96EG3 531 aaPredicted RBP9.29□□□□□ -0.92
KNOP1-201ENST00000219837 IMMP2LQ96T52 175 aa9.29□□□□□ -0.92
KNOP1-201ENST00000219837 RPL35AP18077 110 aaKnown RBP9.29□□□□□ -0.92
KNOP1-201ENST00000219837 EVI2AP22794 236 aa9.29□□□□□ -0.92
KNOP1-201ENST00000219837 RHOGP84095 191 aa9.29□□□□□ -0.92
KNOP1-201ENST00000219837 FBLN7Q53RD9 439 aa9.29□□□□□ -0.92
KNOP1-201ENST00000219837 PSMG3Q9BT73 122 aaPredicted RBP9.29□□□□□ -0.92
KNOP1-201ENST00000219837 TMEM133Q9H2Q1 129 aa9.29□□□□□ -0.92
KNOP1-201ENST00000219837 NPDC1Q9NQX5 325 aaPredicted RBP9.29□□□□□ -0.92
KNOP1-201ENST00000219837 PINLYPA6NC86 204 aa9.28□□□□□ -0.92
KNOP1-201ENST00000219837 DUSP14O95147 198 aaKnown RBP9.28□□□□□ -0.92
KNOP1-201ENST00000219837 TMEM50AO95807 157 aa9.28□□□□□ -0.92
KNOP1-201ENST00000219837 FXYD7P58549 80 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms