RNA–Protein interactions for RNA: ENST00000219281.7

USB1-201, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USB1, Length 2,282 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-201ENST00000219281 TMEM106BQ9NUM4 274 aa14.13□□□□□ -0.15
USB1-201ENST00000219281 SLC45A2Q9UMX9 530 aa14.13□□□□□ -0.15
USB1-201ENST00000219281 V9GYV3 84 aa14.13□□□□□ -0.15
USB1-201ENST00000219281 HELTA6NFD8 242 aa14.13□□□□□ -0.15
USB1-201ENST00000219281 GATA2P23769 480 aaPredicted RBP14.13□□□□□ -0.15
USB1-201ENST00000219281 PAFAH1B2P68402 229 aa14.13□□□□□ -0.15
USB1-201ENST00000219281 OR8I2Q8N0Y5 310 aa14.13□□□□□ -0.15
USB1-201ENST00000219281 FAM169BQ8N8A8 192 aa14.13□□□□□ -0.15
USB1-201ENST00000219281 DEFB108BQ8NET1 73 aa14.13□□□□□ -0.15
USB1-201ENST00000219281 PLEKHA3Q9HB20 300 aa14.13□□□□□ -0.15
USB1-201ENST00000219281 DMXL2Q8TDJ6 3036 aa14.12□□□□□ -0.15
USB1-201ENST00000219281 SNURFLB1AK76 121 aa14.12□□□□□ -0.15
USB1-201ENST00000219281 F2Z2F3 143 aa14.12□□□□□ -0.15
USB1-201ENST00000219281 GNG4P50150 75 aa14.12□□□□□ -0.15
USB1-201ENST00000219281 CENPWQ5EE01 88 aa14.12□□□□□ -0.15
USB1-201ENST00000219281 TOMM20LQ6UXN7 152 aa14.12□□□□□ -0.15
USB1-201ENST00000219281 SLC25A10Q9UBX3 287 aaPredicted RBP14.12□□□□□ -0.15
USB1-201ENST00000219281 PRNDQ9UKY0 176 aa14.12□□□□□ -0.15
USB1-201ENST00000219281 PQLC2Q6ZP29 291 aa14.12□□□□□ -0.15
USB1-201ENST00000219281 BAGE3Q86Y29 109 aa14.12□□□□□ -0.15
USB1-201ENST00000219281 BAGE2Q86Y30 109 aa14.12□□□□□ -0.15
USB1-201ENST00000219281 ZNF439Q8NDP4 499 aa14.12□□□□□ -0.15
USB1-201ENST00000219281 ADTRPQ96IZ2 230 aa14.12□□□□□ -0.15
USB1-201ENST00000219281 RAB9BQ9NP90 201 aa14.12□□□□□ -0.15
USB1-201ENST00000219281 SPTBN2O15020 2390 aa14.12□□□□□ -0.15
USB1-201ENST00000219281 IGKV1OR2-108A0A075B7D4 117 aa14.11□□□□□ -0.15
USB1-201ENST00000219281 M0R143 59 aa14.11□□□□□ -0.15
USB1-201ENST00000219281 SPINK4O60575 86 aa14.11□□□□□ -0.15
USB1-201ENST00000219281 MMP23AO75900 390 aa14.11□□□□□ -0.15
USB1-201ENST00000219281 DOLPP1Q86YN1 238 aa14.11□□□□□ -0.15
USB1-201ENST00000219281 ZNF503Q96F45 646 aa14.11□□□□□ -0.15
USB1-201ENST00000219281 HSPB9Q9BQS6 159 aa14.11□□□□□ -0.15
USB1-201ENST00000219281 SFXN3Q9BWM7 321 aa14.11□□□□□ -0.15
USB1-201ENST00000219281 NCOR1P1Q9H4R4 102 aa14.11□□□□□ -0.15
USB1-201ENST00000219281 TMEM167BQ9NRX6 74 aa14.11□□□□□ -0.15
USB1-201ENST00000219281 IL19Q9UHD0 177 aa14.11□□□□□ -0.15
USB1-201ENST00000219281 ATMQ13315 3056 aa14.11□□□□□ -0.15
USB1-201ENST00000219281 SRRM4A7MD48 611 aaKnown RBP14.11□□□□□ -0.15
USB1-201ENST00000219281 FNDC10F2Z333 226 aa14.11□□□□□ -0.15
USB1-201ENST00000219281 UPK2O00526 184 aa14.11□□□□□ -0.15
USB1-201ENST00000219281 IGKV1-16P04430 117 aa14.11□□□□□ -0.15
USB1-201ENST00000219281 ESDP10768 282 aa14.11□□□□□ -0.15
USB1-201ENST00000219281 PRCDQ00LT1 54 aa14.11□□□□□ -0.15
USB1-201ENST00000219281 POU2AF1Q16633 256 aa14.11□□□□□ -0.15
USB1-201ENST00000219281 MLANAQ16655 118 aa14.11□□□□□ -0.15
USB1-201ENST00000219281 TDRG1Q3Y452 100 aa14.11□□□□□ -0.15
USB1-201ENST00000219281 Q6ZS92 163 aa14.11□□□□□ -0.15
USB1-201ENST00000219281 ST6GALNAC3Q8NDV1 305 aa14.11□□□□□ -0.15
USB1-201ENST00000219281 NEU1Q99519 415 aa14.11□□□□□ -0.15
USB1-201ENST00000219281 RNASE7Q9H1E1 156 aaKnown RBP14.11□□□□□ -0.15
USB1-201ENST00000219281 ZNRD1Q9P1U0 126 aa14.11□□□□□ -0.15
USB1-201ENST00000219281 KLK10O43240 276 aa14.1□□□□□ -0.15
USB1-201ENST00000219281 OR7C2O60412 319 aa14.1□□□□□ -0.15
USB1-201ENST00000219281 CT45A6P0DMU7 189 aa14.1□□□□□ -0.15
USB1-201ENST00000219281 CT45A5P0DMU8 189 aa14.1□□□□□ -0.15
USB1-201ENST00000219281 CT45A7P0DMV0 189 aa14.1□□□□□ -0.15
USB1-201ENST00000219281 GLRXP35754 106 aa14.1□□□□□ -0.15
USB1-201ENST00000219281 RANP62826 216 aaKnown RBP14.1□□□□□ -0.15
USB1-201ENST00000219281 FAM222BQ8WU58 562 aa14.1□□□□□ -0.15
USB1-201ENST00000219281 CCL13Q99616 98 aa14.1□□□□□ -0.15
USB1-201ENST00000219281 TECRQ9NZ01 308 aaKnown RBP14.1□□□□□ -0.15
USB1-201ENST00000219281 RNF7Q9UBF6 113 aa14.1□□□□□ -0.15
USB1-201ENST00000219281 TEX50A0A1B0GTY4 177 aa14.1□□□□□ -0.15
USB1-201ENST00000219281 OR10J4P0C629 311 aa14.1□□□□□ -0.15
USB1-201ENST00000219281 CDKN1AP38936 164 aa14.1□□□□□ -0.15
USB1-201ENST00000219281 FXYD3Q14802 87 aa14.1□□□□□ -0.15
USB1-201ENST00000219281 ZNF474Q6S9Z5 364 aaPredicted RBP14.1□□□□□ -0.15
USB1-201ENST00000219281 RPRMLQ8N4K4 120 aa14.1□□□□□ -0.15
USB1-201ENST00000219281 RBMXL3Q8N7X1 1067 aaKnown RBP14.1□□□□□ -0.15
USB1-201ENST00000219281 GAFA1Q96PS6 74 aa14.1□□□□□ -0.15
USB1-201ENST00000219281 GCM1Q9NP62 436 aa14.1□□□□□ -0.15
USB1-201ENST00000219281 MBD3L4A6NDZ8 208 aaPredicted RBP14.09□□□□□ -0.15
USB1-201ENST00000219281 MBD3L3A6NE82 208 aaPredicted RBP14.09□□□□□ -0.15
USB1-201ENST00000219281 MBD3L5A6NJ08 208 aaPredicted RBP14.09□□□□□ -0.15
USB1-201ENST00000219281 TPTE2P1Q5T6R2 138 aa14.09□□□□□ -0.15
USB1-201ENST00000219281 ZNF705AQ6ZN79 300 aaPredicted RBP14.09□□□□□ -0.15
USB1-201ENST00000219281 FAM216BQ8N7L0 139 aa14.09□□□□□ -0.15
USB1-201ENST00000219281 MBD3L2Q8NHZ7 208 aaPredicted RBP14.09□□□□□ -0.15
USB1-201ENST00000219281 SLC35D1Q9NTN3 355 aa14.09□□□□□ -0.15
USB1-201ENST00000219281 ZNF257Q9Y2Q1 563 aa14.09□□□□□ -0.15
USB1-201ENST00000219281 ARL2-SNX15V9GYD0 113 aa14.09□□□□□ -0.15
USB1-201ENST00000219281 RAB4AP20338 218 aa14.08□□□□□ -0.15
USB1-201ENST00000219281 Q0VG73 95 aa14.08□□□□□ -0.15
USB1-201ENST00000219281 TIMM23BQ5SRD1 257 aa14.08□□□□□ -0.15
USB1-201ENST00000219281 STUMQ69YW2 141 aa14.08□□□□□ -0.15
USB1-201ENST00000219281 OR5AU1Q8NGC0 362 aa14.08□□□□□ -0.15
USB1-201ENST00000219281 SNRNP40Q96DI7 357 aaKnown RBP14.08□□□□□ -0.15
USB1-201ENST00000219281 GNB1LQ9BYB4 327 aa14.08□□□□□ -0.15
USB1-201ENST00000219281 SAMD10Q9BYL1 202 aa14.08□□□□□ -0.15
USB1-201ENST00000219281 SUMO1P63165 101 aaKnown RBP14.08□□□□□ -0.16
USB1-201ENST00000219281 SLC35B1P78383 322 aa14.08□□□□□ -0.16
USB1-201ENST00000219281 TNFAIP6P98066 277 aaPredicted RBP14.08□□□□□ -0.16
USB1-201ENST00000219281 RND1Q92730 232 aa14.08□□□□□ -0.16
USB1-201ENST00000219281 SLC35E1Q96K37 410 aa14.08□□□□□ -0.16
USB1-201ENST00000219281 NAT8BQ9UHF3 227 aa14.08□□□□□ -0.16
USB1-201ENST00000219281 DSCAMO60469 2012 aa14.08□□□□□ -0.16
USB1-201ENST00000219281 MAP1BP46821 2468 aaKnown RBP14.07□□□□□ -0.16
USB1-201ENST00000219281 IGLV3-9A0A075B6K5 115 aa14.07□□□□□ -0.16
USB1-201ENST00000219281 GGTLC3B5MD39 225 aa14.07□□□□□ -0.16
USB1-201ENST00000219281 GATA4P43694 442 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms