RNA–Protein interactions for RNA: ENST00000218388.8

TIMP1-201, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP1, Length 892 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-201ENST00000218388 BRI3O95415 125 aa10.31□□□□□ -0.76
TIMP1-201ENST00000218388 SIX6O95475 246 aa10.31□□□□□ -0.76
TIMP1-201ENST00000218388 IGLV1-40P01703 118 aa10.31□□□□□ -0.76
TIMP1-201ENST00000218388 REG1AP05451 166 aa10.31□□□□□ -0.76
TIMP1-201ENST00000218388 PF4V1P10720 104 aa10.31□□□□□ -0.76
TIMP1-201ENST00000218388 HTR2BP41595 481 aa10.31□□□□□ -0.76
TIMP1-201ENST00000218388 RPP30P78346 268 aaKnown RBP10.31□□□□□ -0.76
TIMP1-201ENST00000218388 ID3Q02535 119 aa10.31□□□□□ -0.76
TIMP1-201ENST00000218388 Q6ZNX1 250 aa10.31□□□□□ -0.76
TIMP1-201ENST00000218388 NOXA1Q86UR1 476 aa10.31□□□□□ -0.76
TIMP1-201ENST00000218388 ZNF114Q8NC26 417 aa10.31□□□□□ -0.76
TIMP1-201ENST00000218388 ASB13Q8WXK3 278 aa10.31□□□□□ -0.76
TIMP1-201ENST00000218388 THYN1Q9P016 225 aa10.31□□□□□ -0.76
TIMP1-201ENST00000218388 SOX15O60248 233 aa10.3□□□□□ -0.76
TIMP1-201ENST00000218388 TRGV3P03979 118 aa10.3□□□□□ -0.76
TIMP1-201ENST00000218388 PVALBP20472 110 aaPredicted RBP10.3□□□□□ -0.76
TIMP1-201ENST00000218388 PSMB8P28062 276 aa10.3□□□□□ -0.76
TIMP1-201ENST00000218388 ATP5IP56385 69 aaPredicted RBP10.3□□□□□ -0.76
TIMP1-201ENST00000218388 TPPP2P59282 170 aa10.3□□□□□ -0.76
TIMP1-201ENST00000218388 S100A10P60903 97 aa10.3□□□□□ -0.76
TIMP1-201ENST00000218388 FCN2Q15485 313 aa10.3□□□□□ -0.76
TIMP1-201ENST00000218388 SLC24A4Q8NFF2 622 aa10.3□□□□□ -0.76
TIMP1-201ENST00000218388 OR1P1Q8NH06 330 aa10.3□□□□□ -0.76
TIMP1-201ENST00000218388 WIPF2Q8TF74 440 aaPredicted RBP10.3□□□□□ -0.76
TIMP1-201ENST00000218388 RAB40CQ96S21 281 aa10.3□□□□□ -0.76
TIMP1-201ENST00000218388 MAGT1Q9H0U3 335 aa10.3□□□□□ -0.76
TIMP1-201ENST00000218388 F11RQ9Y624 299 aaKnown RBP10.3□□□□□ -0.76
TIMP1-201ENST00000218388 U3KQ87 197 aa10.3□□□□□ -0.76
TIMP1-201ENST00000218388 A0A0G2JLM5 398 aa10.29□□□□□ -0.76
TIMP1-201ENST00000218388 FAM223BA6NKX1 122 aa10.29□□□□□ -0.76
TIMP1-201ENST00000218388 L7N2F9 121 aa10.29□□□□□ -0.76
TIMP1-201ENST00000218388 CORTO00230 105 aa10.29□□□□□ -0.76
TIMP1-201ENST00000218388 SSSCA1O60232 199 aa10.29□□□□□ -0.76
TIMP1-201ENST00000218388 IFNA10P01566 189 aa10.29□□□□□ -0.76
TIMP1-201ENST00000218388 MBPP02686 304 aaPredicted RBP10.29□□□□□ -0.76
TIMP1-201ENST00000218388 RLN2P04090 185 aa10.29□□□□□ -0.76
TIMP1-201ENST00000218388 PET100P0DJ07 73 aa10.29□□□□□ -0.76
TIMP1-201ENST00000218388 IAPPP10997 89 aa10.29□□□□□ -0.76
TIMP1-201ENST00000218388 RAB9AP51151 201 aa10.29□□□□□ -0.76
TIMP1-201ENST00000218388 H2BFSP57053 126 aa10.29□□□□□ -0.76
TIMP1-201ENST00000218388 POLR2GP62487 172 aaKnown RBP eCLIP10.29□□□□□ -0.76
TIMP1-201ENST00000218388 VAMP2P63027 116 aa10.29□□□□□ -0.76
TIMP1-201ENST00000218388 KRTAP21-3Q3LHN1 58 aa10.29□□□□□ -0.76
TIMP1-201ENST00000218388 KHDC1LQ5JSQ8 128 aa10.29□□□□□ -0.76
TIMP1-201ENST00000218388 C10orf99Q6UWK7 81 aa10.29□□□□□ -0.76
TIMP1-201ENST00000218388 FAM223AQ8IWN6 122 aa10.29□□□□□ -0.76
TIMP1-201ENST00000218388 C3orf56Q8N813 242 aa10.29□□□□□ -0.76
TIMP1-201ENST00000218388 RNF152Q8N8N0 203 aa10.29□□□□□ -0.76
TIMP1-201ENST00000218388 USMG5Q96IX5 58 aa10.29□□□□□ -0.76
TIMP1-201ENST00000218388 MS4A10Q96PG2 267 aa10.29□□□□□ -0.76
TIMP1-201ENST00000218388 LSM5Q9Y4Y9 91 aaKnown RBP10.29□□□□□ -0.76
TIMP1-201ENST00000218388 TCRBV4S1A1TA0A5B7 111 aa10.28□□□□□ -0.76
TIMP1-201ENST00000218388 K7EPK0 472 aa10.28□□□□□ -0.76
TIMP1-201ENST00000218388 NPY1RP25929 384 aa10.28□□□□□ -0.76
TIMP1-201ENST00000218388 RAB32Q13637 225 aa10.28□□□□□ -0.76
TIMP1-201ENST00000218388 SLC25A24Q6NUK1 477 aa10.28□□□□□ -0.76
TIMP1-201ENST00000218388 NECAP1Q8NC96 275 aa10.28□□□□□ -0.76
TIMP1-201ENST00000218388 OR11H7Q8NGC8 314 aa10.28□□□□□ -0.76
TIMP1-201ENST00000218388 P2RX4Q99571 388 aa10.28□□□□□ -0.76
TIMP1-201ENST00000218388 ZNF747Q9BV97 191 aa10.28□□□□□ -0.76
TIMP1-201ENST00000218388 ZNF436Q9C0F3 470 aaPredicted RBP10.28□□□□□ -0.76
TIMP1-201ENST00000218388 RCL1Q9Y2P8 373 aaKnown RBP10.28□□□□□ -0.76
TIMP1-201ENST00000218388 TSSC4Q9Y5U2 329 aaPredicted RBP10.28□□□□□ -0.76
TIMP1-201ENST00000218388 IGLV11-55A0A075B6I3 123 aa10.27□□□□□ -0.77
TIMP1-201ENST00000218388 TRBV9A0A0B4J1U6 114 aa10.27□□□□□ -0.77
TIMP1-201ENST00000218388 OR2J3O76001 311 aa10.27□□□□□ -0.77
TIMP1-201ENST00000218388 PRH1P02810 166 aa10.27□□□□□ -0.77
TIMP1-201ENST00000218388 RPLP1P05386 114 aaKnown RBP10.27□□□□□ -0.77
TIMP1-201ENST00000218388 GIPP09681 153 aaPredicted RBP10.27□□□□□ -0.77
TIMP1-201ENST00000218388 RNASE2P10153 161 aaKnown RBP10.27□□□□□ -0.77
TIMP1-201ENST00000218388 CD28P10747 220 aa10.27□□□□□ -0.77
TIMP1-201ENST00000218388 CXCL3P19876 107 aa10.27□□□□□ -0.77
TIMP1-201ENST00000218388 TAS2R30P59541 319 aa10.27□□□□□ -0.77
TIMP1-201ENST00000218388 RAB11AP62491 216 aa10.27□□□□□ -0.77
TIMP1-201ENST00000218388 RPL23AP62750 156 aaKnown RBP10.27□□□□□ -0.77
TIMP1-201ENST00000218388 RHOGP84095 191 aa10.27□□□□□ -0.77
TIMP1-201ENST00000218388 CD83Q01151 205 aa10.27□□□□□ -0.77
TIMP1-201ENST00000218388 SRSF4Q08170 494 aaKnown RBP10.27□□□□□ -0.77
TIMP1-201ENST00000218388 IL15RAQ13261 267 aa10.27□□□□□ -0.77
TIMP1-201ENST00000218388 EXOSC2Q13868 293 aaKnown RBP10.27□□□□□ -0.77
TIMP1-201ENST00000218388 KLK9Q2XQG4 91 aa10.27□□□□□ -0.77
TIMP1-201ENST00000218388 BSXQ3C1V8 233 aa10.27□□□□□ -0.77
TIMP1-201ENST00000218388 C2orf83Q53S99 150 aa10.27□□□□□ -0.77
TIMP1-201ENST00000218388 SMIM8Q96KF7 97 aa10.27□□□□□ -0.77
TIMP1-201ENST00000218388 CXorf58Q96LI9 332 aa10.27□□□□□ -0.77
TIMP1-201ENST00000218388 PSENENQ9NZ42 101 aa10.27□□□□□ -0.77
TIMP1-201ENST00000218388 FBXL7Q9UJT9 491 aa10.27□□□□□ -0.77
TIMP1-201ENST00000218388 KLK9Q9UKQ9 250 aa10.27□□□□□ -0.77
TIMP1-201ENST00000218388 STRAPQ9Y3F4 350 aaKnown RBP10.27□□□□□ -0.77
TIMP1-201ENST00000218388 TSC22D2O75157 780 aa10.26□□□□□ -0.77
TIMP1-201ENST00000218388 OR8U8P0C7N1 319 aa10.26□□□□□ -0.77
TIMP1-201ENST00000218388 RAP2BP61225 183 aa10.26□□□□□ -0.77
TIMP1-201ENST00000218388 ATP5G2Q06055 141 aa10.26□□□□□ -0.77
TIMP1-201ENST00000218388 FGL1Q08830 312 aa10.26□□□□□ -0.77
TIMP1-201ENST00000218388 LRRC37A5PQ49AS3 106 aa10.26□□□□□ -0.77
TIMP1-201ENST00000218388 FAM209BQ5JX69 171 aa10.26□□□□□ -0.77
TIMP1-201ENST00000218388 SPANXN5Q5MJ07 72 aa10.26□□□□□ -0.77
TIMP1-201ENST00000218388 SHISA2Q6UWI4 295 aa10.26□□□□□ -0.77
TIMP1-201ENST00000218388 C19orf35Q6ZS72 473 aa10.26□□□□□ -0.77
TIMP1-201ENST00000218388 NDUFA11Q86Y39 141 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms