RNA–Protein interactions for RNA: ENST00000191018.9

CTSA-201, Transcript of cathepsin A, humanhuman

TSL 1 (best) BASIC

Gene CTSA, Length 1,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-201ENST00000191018 CYB5BO43169 146 aa14.9□□□□□ -0.02
CTSA-201ENST00000191018 CD69Q07108 199 aa14.9□□□□□ -0.02
CTSA-201ENST00000191018 TMEM144Q7Z5S9 345 aa14.9□□□□□ -0.02
CTSA-201ENST00000191018 PPP1R27Q86WC6 154 aa14.9□□□□□ -0.02
CTSA-201ENST00000191018 KCNIP2Q9NS61 270 aa14.9□□□□□ -0.02
CTSA-201ENST00000191018 HILPDAQ9Y5L2 63 aa14.9□□□□□ -0.02
CTSA-201ENST00000191018 PXMP4Q9Y6I8 212 aa14.9□□□□□ -0.02
CTSA-201ENST00000191018 PLXNB1O43157 2135 aa14.89□□□□□ -0.03
CTSA-201ENST00000191018 EIF3GO75821 320 aaKnown RBP eCLIP14.89□□□□□ -0.03
CTSA-201ENST00000191018 BCL2P10415 239 aa14.89□□□□□ -0.03
CTSA-201ENST00000191018 SRSF1Q07955 248 aaKnown RBP eCLIP14.89□□□□□ -0.03
CTSA-201ENST00000191018 FAM122CQ6P4D5 195 aa14.89□□□□□ -0.03
CTSA-201ENST00000191018 RXFP4Q8TDU9 374 aa14.89□□□□□ -0.03
CTSA-201ENST00000191018 RAB24Q969Q5 203 aa14.89□□□□□ -0.03
CTSA-201ENST00000191018 METTL1Q9UBP6 276 aaKnown RBP14.89□□□□□ -0.03
CTSA-201ENST00000191018 IGLC7A0M8Q6 106 aa14.89□□□□□ -0.03
CTSA-201ENST00000191018 RPL29P47914 159 aaKnown RBP14.89□□□□□ -0.03
CTSA-201ENST00000191018 COMPP49747 757 aaPredicted RBP14.89□□□□□ -0.03
CTSA-201ENST00000191018 GCSAMLQ5JQS6 135 aa14.89□□□□□ -0.03
CTSA-201ENST00000191018 MINOS1Q5TGZ0 78 aa14.89□□□□□ -0.03
CTSA-201ENST00000191018 MIC13Q5XKP0 118 aa14.89□□□□□ -0.03
CTSA-201ENST00000191018 SREK1IP1Q8N9Q2 155 aaPredicted RBP14.89□□□□□ -0.03
CTSA-201ENST00000191018 CLRN3Q8NCR9 226 aa14.89□□□□□ -0.03
CTSA-201ENST00000191018 CACNG8Q8WXS5 425 aa14.89□□□□□ -0.03
CTSA-201ENST00000191018 P2RX4Q99571 388 aa14.89□□□□□ -0.03
CTSA-201ENST00000191018 POLR3KQ9Y2Y1 108 aaPredicted RBP14.89□□□□□ -0.03
CTSA-201ENST00000191018 MINOS1-NBL1R4GNA1 71 aa14.89□□□□□ -0.03
CTSA-201ENST00000191018 SPTAN1Q13813 2472 aaKnown RBP14.88□□□□□ -0.03
CTSA-201ENST00000191018 FAM74A7A6NL05 159 aa14.88□□□□□ -0.03
CTSA-201ENST00000191018 ZFP92A6NM28 416 aa14.88□□□□□ -0.03
CTSA-201ENST00000191018 OOSP1A8MZH6 123 aa14.88□□□□□ -0.03
CTSA-201ENST00000191018 OR13C7P0DN81 318 aa14.88□□□□□ -0.03
CTSA-201ENST00000191018 GPX4P36969 197 aaPredicted RBP14.88□□□□□ -0.03
CTSA-201ENST00000191018 RPL27AP46776 148 aaKnown RBP14.88□□□□□ -0.03
CTSA-201ENST00000191018 CDC34P49427 236 aaPredicted RBP14.88□□□□□ -0.03
CTSA-201ENST00000191018 GAMTQ14353 236 aa14.88□□□□□ -0.03
CTSA-201ENST00000191018 TNXAQ16473 311 aa14.88□□□□□ -0.03
CTSA-201ENST00000191018 FAM74A3Q4VXF1 159 aa14.88□□□□□ -0.03
CTSA-201ENST00000191018 PVRIGQ6DKI7 326 aa14.88□□□□□ -0.03
CTSA-201ENST00000191018 RNASEH2CQ8TDP1 164 aaKnown RBP14.88□□□□□ -0.03
CTSA-201ENST00000191018 NAV3Q8IVL0 2385 aa14.87□□□□□ -0.03
CTSA-201ENST00000191018 IGKV1OR2-108A0A075B7D4 117 aa14.87□□□□□ -0.03
CTSA-201ENST00000191018 FOXH1O75593 365 aa14.87□□□□□ -0.03
CTSA-201ENST00000191018 DEFA4P12838 97 aa14.87□□□□□ -0.03
CTSA-201ENST00000191018 SUB1P53999 127 aaKnown RBP eCLIP14.87□□□□□ -0.03
CTSA-201ENST00000191018 SSBP2P81877 361 aaPredicted RBP14.87□□□□□ -0.03
CTSA-201ENST00000191018 PRR20EP86478 221 aa14.87□□□□□ -0.03
CTSA-201ENST00000191018 PRR20CP86479 221 aa14.87□□□□□ -0.03
CTSA-201ENST00000191018 PRR20DP86480 221 aa14.87□□□□□ -0.03
CTSA-201ENST00000191018 PRR20BP86481 221 aa14.87□□□□□ -0.03
CTSA-201ENST00000191018 PRR20AP86496 221 aa14.87□□□□□ -0.03
CTSA-201ENST00000191018 RAB31Q13636 194 aa14.87□□□□□ -0.03
CTSA-201ENST00000191018 MLANAQ16655 118 aa14.87□□□□□ -0.03
CTSA-201ENST00000191018 TMEM249Q2WGJ8 235 aa14.87□□□□□ -0.03
CTSA-201ENST00000191018 ZNF114Q8NC26 417 aa14.87□□□□□ -0.03
CTSA-201ENST00000191018 FBXL15Q9H469 300 aa14.87□□□□□ -0.03
CTSA-201ENST00000191018 ZNF462Q96JM2 2506 aa14.87□□□□□ -0.03
CTSA-201ENST00000191018 A0A1W2PRD5 423 aa14.86□□□□□ -0.03
CTSA-201ENST00000191018 A0A1W2PRF3 423 aa14.86□□□□□ -0.03
CTSA-201ENST00000191018 A0A1W2PRM7 423 aa14.86□□□□□ -0.03
CTSA-201ENST00000191018 HMGB3O15347 200 aaKnown RBP14.86□□□□□ -0.03
CTSA-201ENST00000191018 ACTL6BO94805 426 aa14.86□□□□□ -0.03
CTSA-201ENST00000191018 SOHLH1Q5JUK2 328 aa14.86□□□□□ -0.03
CTSA-201ENST00000191018 STPG3Q8N7X2 389 aa14.86□□□□□ -0.03
CTSA-201ENST00000191018 SSMEM1Q8WWF3 244 aa14.86□□□□□ -0.03
CTSA-201ENST00000191018 TBX15Q96SF7 602 aa14.86□□□□□ -0.03
CTSA-201ENST00000191018 TMA7Q9Y2S6 64 aaKnown RBP14.86□□□□□ -0.03
CTSA-201ENST00000191018 UBR5O95071 2799 aaPredicted RBP14.86□□□□□ -0.03
CTSA-201ENST00000191018 MYO18BQ8IUG5 2567 aa14.86□□□□□ -0.03
CTSA-201ENST00000191018 VWC2LB2RUY7 222 aa14.86□□□□□ -0.03
CTSA-201ENST00000191018 NDUFS8O00217 210 aa14.86□□□□□ -0.03
CTSA-201ENST00000191018 TOX4O94842 621 aa14.86□□□□□ -0.03
CTSA-201ENST00000191018 NDUFA3O95167 84 aa14.86□□□□□ -0.03
CTSA-201ENST00000191018 FBP1P09467 338 aa14.86□□□□□ -0.03
CTSA-201ENST00000191018 B2MP61769 119 aa14.86□□□□□ -0.03
CTSA-201ENST00000191018 CCDC144NLQ6NUI1 221 aa14.86□□□□□ -0.03
CTSA-201ENST00000191018 SLC16A13Q7RTY0 426 aa14.86□□□□□ -0.03
CTSA-201ENST00000191018 MRPL41Q8IXM3 137 aaKnown RBP14.86□□□□□ -0.03
CTSA-201ENST00000191018 DYNAPQ8N1N2 210 aa14.86□□□□□ -0.03
CTSA-201ENST00000191018 NPBQ8NG41 125 aa14.86□□□□□ -0.03
CTSA-201ENST00000191018 C10orf105Q8TEF2 133 aa14.86□□□□□ -0.03
CTSA-201ENST00000191018 FAM168AQ92567 244 aa14.86□□□□□ -0.03
CTSA-201ENST00000191018 PIMREGQ9BSJ6 248 aa14.86□□□□□ -0.03
CTSA-201ENST00000191018 VAX2Q9UIW0 290 aa14.86□□□□□ -0.03
CTSA-201ENST00000191018 MOSP00540 346 aa14.85□□□□□ -0.03
CTSA-201ENST00000191018 IFNA1P01562 189 aa14.85□□□□□ -0.03
CTSA-201ENST00000191018 SSX2Q16385 188 aa14.85□□□□□ -0.03
CTSA-201ENST00000191018 CYB561D1Q8N8Q1 229 aa14.85□□□□□ -0.03
CTSA-201ENST00000191018 TMPRSS5Q9H3S3 457 aa14.85□□□□□ -0.03
CTSA-201ENST00000191018 FNDC4Q9H6D8 234 aaPredicted RBP14.85□□□□□ -0.03
CTSA-201ENST00000191018 ASH1LQ9NR48 2969 aaKnown RBP14.85□□□□□ -0.03
CTSA-201ENST00000191018 SLC45A2Q9UMX9 530 aa14.85□□□□□ -0.03
CTSA-201ENST00000191018 TEX22C9J3V5 150 aa14.84□□□□□ -0.03
CTSA-201ENST00000191018 NUPL2O15504 423 aaKnown RBP14.84□□□□□ -0.03
CTSA-201ENST00000191018 LINC00869P0C866 280 aa14.84□□□□□ -0.03
CTSA-201ENST00000191018 PAX6P26367 422 aa14.84□□□□□ -0.03
CTSA-201ENST00000191018 UBE2E1P51965 193 aa14.84□□□□□ -0.03
CTSA-201ENST00000191018 RBMS3Q6XE24 437 aaKnown RBP14.84□□□□□ -0.03
CTSA-201ENST00000191018 EAF1Q96JC9 268 aaPredicted RBP14.84□□□□□ -0.03
CTSA-201ENST00000191018 TBL2Q9Y4P3 447 aaKnown RBP14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms