RNA–Protein interactions for RNA: ENST00000172853.14

NEB-201, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEB, Length 20,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-201ENST00000172853 ZNF680Q8NEM1 530 aa2.93□□□□□ -1.94
NEB-201ENST00000172853 MIA3Q5JRA6 1907 aa2.93□□□□□ -1.94
NEB-201ENST00000172853 SHROOM3Q8TF72 1996 aa2.92□□□□□ -1.94
NEB-201ENST00000172853 FUT5Q11128 374 aa2.92□□□□□ -1.94
NEB-201ENST00000172853 FCMRO60667 390 aa2.92□□□□□ -1.94
NEB-201ENST00000172853 PPP1R32Q7Z5V6 425 aa2.92□□□□□ -1.94
NEB-201ENST00000172853 ZNF414Q96IQ9 312 aa2.92□□□□□ -1.94
NEB-201ENST00000172853 FAM90A10PA6NDY2 464 aa2.92□□□□□ -1.94
NEB-201ENST00000172853 FAM90A8PA6NJQ4 464 aa2.92□□□□□ -1.94
NEB-201ENST00000172853 B4GALT3O60512 393 aa2.92□□□□□ -1.94
NEB-201ENST00000172853 FAM90A13PP0C7W8 464 aa2.92□□□□□ -1.94
NEB-201ENST00000172853 FAM90A24PP0C7X0 464 aa2.92□□□□□ -1.94
NEB-201ENST00000172853 UBE2AP49459 152 aa2.92□□□□□ -1.94
NEB-201ENST00000172853 FGF12P61328 243 aa2.92□□□□□ -1.94
NEB-201ENST00000172853 KLF5Q13887 457 aaPredicted RBP2.92□□□□□ -1.94
NEB-201ENST00000172853 Q6AWC8 147 aa2.92□□□□□ -1.94
NEB-201ENST00000172853 SIGLEC15Q6ZMC9 328 aa2.92□□□□□ -1.94
NEB-201ENST00000172853 FGF20Q9NP95 211 aaPredicted RBP2.92□□□□□ -1.94
NEB-201ENST00000172853 LEPROTO15243 131 aa2.92□□□□□ -1.94
NEB-201ENST00000172853 OTPQ5XKR4 325 aa2.92□□□□□ -1.94
NEB-201ENST00000172853 NTN1O95631 604 aa2.92□□□□□ -1.94
NEB-201ENST00000172853 IGHG3P01860 377 aa2.92□□□□□ -1.94
NEB-201ENST00000172853 CYP2G1PQ6ZSU1 146 aa2.92□□□□□ -1.94
NEB-201ENST00000172853 TRAF4Q9BUZ4 470 aaPredicted RBP2.92□□□□□ -1.94
NEB-201ENST00000172853 VWC2Q2TAL6 325 aa2.92□□□□□ -1.94
NEB-201ENST00000172853 Q96MF0 132 aa2.92□□□□□ -1.94
NEB-201ENST00000172853 ZNF488Q96MN9 340 aa2.92□□□□□ -1.94
NEB-201ENST00000172853 NDUFAF3Q9BU61 184 aa2.92□□□□□ -1.94
NEB-201ENST00000172853 VCYO14598 125 aa2.92□□□□□ -1.94
NEB-201ENST00000172853 BSPH1Q075Z2 132 aa2.92□□□□□ -1.94
NEB-201ENST00000172853 CACNG8Q8WXS5 425 aa2.92□□□□□ -1.94
NEB-201ENST00000172853 PARP14Q460N5 1801 aa2.92□□□□□ -1.94
NEB-201ENST00000172853 IGLV3-27P01718 113 aa2.92□□□□□ -1.94
NEB-201ENST00000172853 DEFB130BP0DP73 79 aa2.92□□□□□ -1.94
NEB-201ENST00000172853 DEFB130AP0DP74 79 aa2.92□□□□□ -1.94
NEB-201ENST00000172853 MUC21Q5SSG8 566 aa2.92□□□□□ -1.94
NEB-201ENST00000172853 SPSB3Q6PJ21 355 aa2.92□□□□□ -1.94
NEB-201ENST00000172853 GATAD1Q8WUU5 269 aa2.92□□□□□ -1.94
NEB-201ENST00000172853 PLEKHB2Q96CS7 222 aa2.92□□□□□ -1.94
NEB-201ENST00000172853 MTFP1Q9UDX5 166 aa2.92□□□□□ -1.94
NEB-201ENST00000172853 FAM90A18PA6NE21 464 aa2.92□□□□□ -1.94
NEB-201ENST00000172853 FAM90A16PA6NEW6 464 aa2.92□□□□□ -1.94
NEB-201ENST00000172853 FAM90A20PA6NIJ5 464 aa2.92□□□□□ -1.94
NEB-201ENST00000172853 FAM90A7PA6NKC0 464 aa2.92□□□□□ -1.94
NEB-201ENST00000172853 FAM90A22PA8MWA6 464 aa2.92□□□□□ -1.94
NEB-201ENST00000172853 FAM90A12PA8MX19 464 aa2.92□□□□□ -1.94
NEB-201ENST00000172853 FAM90A5PA8MXJ8 464 aa2.92□□□□□ -1.94
NEB-201ENST00000172853 FAM90A23PA8MXZ1 464 aa2.92□□□□□ -1.94
NEB-201ENST00000172853 FAM90A15PP0C7V4 464 aa2.92□□□□□ -1.94
NEB-201ENST00000172853 FAM90A14PP0C7W9 464 aa2.92□□□□□ -1.94
NEB-201ENST00000172853 TIRAPP58753 221 aa2.92□□□□□ -1.94
NEB-201ENST00000172853 FANCD2OSQ96PS1 177 aa2.92□□□□□ -1.94
NEB-201ENST00000172853 IL20Q9NYY1 176 aa2.92□□□□□ -1.94
NEB-201ENST00000172853 IGHV3-49A0A0A0MS15 119 aa2.92□□□□□ -1.94
NEB-201ENST00000172853 RBM11P57052 281 aaKnown RBP2.92□□□□□ -1.94
NEB-201ENST00000172853 PPP1R1AQ13522 171 aa2.92□□□□□ -1.94
NEB-201ENST00000172853 Q5BKY6 102 aa2.92□□□□□ -1.94
NEB-201ENST00000172853 RIMKLAQ8IXN7 391 aa2.92□□□□□ -1.94
NEB-201ENST00000172853 GSX2Q9BZM3 304 aa2.92□□□□□ -1.94
NEB-201ENST00000172853 TJP1Q07157 1748 aa2.92□□□□□ -1.94
NEB-201ENST00000172853 TSC2P49815 1807 aa2.92□□□□□ -1.94
NEB-201ENST00000172853 C5orf67F2Z3F1 127 aa2.92□□□□□ -1.94
NEB-201ENST00000172853 LINC00305Q7Z4B0 112 aa2.92□□□□□ -1.94
NEB-201ENST00000172853 TMEM144Q7Z5S9 345 aa2.92□□□□□ -1.94
NEB-201ENST00000172853 F11RQ9Y624 299 aaKnown RBP2.92□□□□□ -1.94
NEB-201ENST00000172853 IGHV3OR16-13A0A075B7E8 117 aa2.92□□□□□ -1.94
NEB-201ENST00000172853 IGHV3-74A0A0B4J1X5 117 aa2.92□□□□□ -1.94
NEB-201ENST00000172853 TRAV5A0A0B4J249 113 aa2.92□□□□□ -1.94
NEB-201ENST00000172853 ITGBL1O95965 494 aaPredicted RBP2.92□□□□□ -1.94
NEB-201ENST00000172853 ZNF436-AS1Q8NC38 126 aaPredicted RBP2.92□□□□□ -1.94
NEB-201ENST00000172853 HIST1H2BAQ96A08 127 aa2.92□□□□□ -1.94
NEB-201ENST00000172853 PEAR1Q5VY43 1037 aaPredicted RBP2.92□□□□□ -1.94
NEB-201ENST00000172853 UBE2E2Q96LR5 201 aa2.92□□□□□ -1.94
NEB-201ENST00000172853 EMCNQ9ULC0 261 aa2.92□□□□□ -1.94
NEB-201ENST00000172853 NKX2-6A6NCS4 301 aa2.92□□□□□ -1.94
NEB-201ENST00000172853 RIPPLY3P57055 190 aa2.92□□□□□ -1.94
NEB-201ENST00000172853 MINOS1Q5TGZ0 78 aa2.92□□□□□ -1.94
NEB-201ENST00000172853 SPACA3Q8IXA5 215 aa2.92□□□□□ -1.94
NEB-201ENST00000172853 LILRA3Q8N6C8 439 aaPredicted RBP2.92□□□□□ -1.94
NEB-201ENST00000172853 MINOS1-NBL1R4GNA1 71 aa2.92□□□□□ -1.94
NEB-201ENST00000172853 CCL1P22362 96 aa2.92□□□□□ -1.94
NEB-201ENST00000172853 TEX43Q6ZNM6 134 aa2.92□□□□□ -1.94
NEB-201ENST00000172853 FER1L6-AS1Q8NA97 138 aa2.92□□□□□ -1.94
NEB-201ENST00000172853 COL11A1P12107 1806 aaPredicted RBP2.92□□□□□ -1.94
NEB-201ENST00000172853 ZAR1LA6NP61 321 aa2.92□□□□□ -1.94
NEB-201ENST00000172853 MPTX1A8MV57 137 aa2.92□□□□□ -1.94
NEB-201ENST00000172853 TMEM238C9JI98 176 aa2.92□□□□□ -1.94
NEB-201ENST00000172853 DPM2O94777 84 aa2.92□□□□□ -1.94
NEB-201ENST00000172853 DMRTC2Q8IXT2 367 aaPredicted RBP2.92□□□□□ -1.94
NEB-201ENST00000172853 RNF183Q96D59 192 aa2.92□□□□□ -1.94
NEB-201ENST00000172853 SDHCQ99643 169 aaPredicted RBP2.92□□□□□ -1.94
NEB-201ENST00000172853 RBM38Q9H0Z9 239 aaKnown RBP2.92□□□□□ -1.94
NEB-201ENST00000172853 MAST2Q6P0Q8 1798 aa2.92□□□□□ -1.94
NEB-201ENST00000172853 THADAQ6YHU6 1953 aa2.91□□□□□ -1.94
NEB-201ENST00000172853 NDUFA3O95167 84 aa2.91□□□□□ -1.94
NEB-201ENST00000172853 OR52E5Q8NH55 327 aa2.91□□□□□ -1.94
NEB-201ENST00000172853 LRP6O75581 1613 aa2.91□□□□□ -1.94
NEB-201ENST00000172853 RBBP6Q7Z6E9 1792 aaKnown RBP2.91□□□□□ -1.94
NEB-201ENST00000172853 IQCF6A8MYZ5 107 aa2.91□□□□□ -1.94
NEB-201ENST00000172853 SAXO1Q8IYX7 474 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms