RNA–Protein interactions for RNA: ENST00000005226.11

USH1C-201, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USH1C, Length 2,700 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-201ENST00000005226 C17orf58Q2M2W7 97 aa11.49□□□□□ -0.57
USH1C-201ENST00000005226 MORN5Q5VZ52 161 aa11.49□□□□□ -0.57
USH1C-201ENST00000005226 ATOH7Q8N100 152 aa11.49□□□□□ -0.57
USH1C-201ENST00000005226 OR4S2Q8NH73 311 aa11.49□□□□□ -0.57
USH1C-201ENST00000005226 OR2V2Q96R30 315 aa11.49□□□□□ -0.57
USH1C-201ENST00000005226 LAMA5O15230 3695 aa11.49□□□□□ -0.57
USH1C-201ENST00000005226 FAM90A9PA6NNJ1 464 aa11.49□□□□□ -0.57
USH1C-201ENST00000005226 SRRM4A7MD48 611 aaKnown RBP11.49□□□□□ -0.57
USH1C-201ENST00000005226 NKX2-8O15522 239 aa11.49□□□□□ -0.57
USH1C-201ENST00000005226 IGKV1-16P04430 117 aa11.49□□□□□ -0.57
USH1C-201ENST00000005226 CD59P13987 128 aa11.49□□□□□ -0.57
USH1C-201ENST00000005226 RAB31Q13636 194 aa11.49□□□□□ -0.57
USH1C-201ENST00000005226 TMEM136Q6ZRR5 245 aa11.49□□□□□ -0.57
USH1C-201ENST00000005226 TMEM178AQ8NBL3 297 aa11.49□□□□□ -0.57
USH1C-201ENST00000005226 OR10W1Q8NGF6 305 aa11.49□□□□□ -0.57
USH1C-201ENST00000005226 WNT10AQ9GZT5 417 aa11.49□□□□□ -0.57
USH1C-201ENST00000005226 NRN1Q9NPD7 142 aa11.49□□□□□ -0.57
USH1C-201ENST00000005226 C9JCJ5 164 aa11.48□□□□□ -0.57
USH1C-201ENST00000005226 DLEU1O43261 78 aa11.48□□□□□ -0.57
USH1C-201ENST00000005226 ZNF253O75346 499 aa11.48□□□□□ -0.57
USH1C-201ENST00000005226 MT-CO2P00403 227 aa11.48□□□□□ -0.57
USH1C-201ENST00000005226 ESDP10768 282 aa11.48□□□□□ -0.57
USH1C-201ENST00000005226 SRIP30626 198 aa11.48□□□□□ -0.57
USH1C-201ENST00000005226 MRPS11P82912 194 aaKnown RBP11.48□□□□□ -0.57
USH1C-201ENST00000005226 LPAR2Q9HBW0 351 aa11.48□□□□□ -0.57
USH1C-201ENST00000005226 TMEM14BQ9NUH8 114 aa11.48□□□□□ -0.57
USH1C-201ENST00000005226 SLC45A2Q9UMX9 530 aa11.48□□□□□ -0.57
USH1C-201ENST00000005226 GOLT1BQ9Y3E0 138 aa11.48□□□□□ -0.57
USH1C-201ENST00000005226 A0A1W2PS18 150 aa11.48□□□□□ -0.57
USH1C-201ENST00000005226 J3QR06 171 aa11.48□□□□□ -0.57
USH1C-201ENST00000005226 Q0VG73 95 aa11.48□□□□□ -0.57
USH1C-201ENST00000005226 MMDQ15546 238 aa11.48□□□□□ -0.57
USH1C-201ENST00000005226 HES3Q5TGS1 186 aa11.48□□□□□ -0.57
USH1C-201ENST00000005226 TRAT1Q6PIZ9 186 aa11.48□□□□□ -0.57
USH1C-201ENST00000005226 RND1Q92730 232 aa11.48□□□□□ -0.57
USH1C-201ENST00000005226 SFXN3Q9BWM7 321 aa11.48□□□□□ -0.57
USH1C-201ENST00000005226 PLCE1Q9P212 2302 aa11.47□□□□□ -0.57
USH1C-201ENST00000005226 F2RL2O00254 374 aa11.47□□□□□ -0.57
USH1C-201ENST00000005226 NTF3P20783 257 aa11.47□□□□□ -0.57
USH1C-201ENST00000005226 MAJINQ3KP22 176 aa11.47□□□□□ -0.57
USH1C-201ENST00000005226 LHFPL4Q7Z7J7 247 aa11.47□□□□□ -0.57
USH1C-201ENST00000005226 IL19Q9UHD0 177 aa11.47□□□□□ -0.57
USH1C-201ENST00000005226 TRAV34A0A0B4J273 112 aa11.47□□□□□ -0.57
USH1C-201ENST00000005226 TRGV8A0A0C4DH27 118 aa11.47□□□□□ -0.57
USH1C-201ENST00000005226 AREGP15514 252 aa11.47□□□□□ -0.57
USH1C-201ENST00000005226 ITLN1Q8WWA0 313 aa11.47□□□□□ -0.57
USH1C-201ENST00000005226 NEUROG1Q92886 237 aa11.47□□□□□ -0.57
USH1C-201ENST00000005226 GNB1LQ9BYB4 327 aa11.47□□□□□ -0.57
USH1C-201ENST00000005226 PLEKHA3Q9HB20 300 aa11.47□□□□□ -0.57
USH1C-201ENST00000005226 CEP250Q9BV73 2442 aa11.47□□□□□ -0.57
USH1C-201ENST00000005226 A0A1B0GWJ7 208 aa11.46□□□□□ -0.57
USH1C-201ENST00000005226 BMPR1BO00238 502 aa11.46□□□□□ -0.57
USH1C-201ENST00000005226 IGLV2-8P01709 118 aa11.46□□□□□ -0.57
USH1C-201ENST00000005226 CX3CL1P78423 397 aa11.46□□□□□ -0.57
USH1C-201ENST00000005226 GUSBP1Q15486 140 aa11.46□□□□□ -0.57
USH1C-201ENST00000005226 TIGITQ495A1 244 aa11.46□□□□□ -0.57
USH1C-201ENST00000005226 LCN12Q6JVE5 192 aa11.46□□□□□ -0.57
USH1C-201ENST00000005226 FDCSPQ8NFU4 85 aa11.46□□□□□ -0.57
USH1C-201ENST00000005226 FOXA2Q9Y261 457 aaPredicted RBP11.46□□□□□ -0.57
USH1C-201ENST00000005226 SSBP2P81877 361 aaPredicted RBP11.46□□□□□ -0.58
USH1C-201ENST00000005226 SPATA45Q537H7 98 aa11.46□□□□□ -0.58
USH1C-201ENST00000005226 OR2T6Q8NHC8 308 aa11.46□□□□□ -0.58
USH1C-201ENST00000005226 DCAF16Q9NXF7 216 aa11.46□□□□□ -0.58
USH1C-201ENST00000005226 M0QZK8 103 aa11.45□□□□□ -0.58
USH1C-201ENST00000005226 CGB3P0DN86 165 aa11.45□□□□□ -0.58
USH1C-201ENST00000005226 CGB7P0DN87 165 aa11.45□□□□□ -0.58
USH1C-201ENST00000005226 BTF3P20290 206 aaKnown RBP11.45□□□□□ -0.58
USH1C-201ENST00000005226 MBNL2Q5VZF2 373 aaKnown RBP11.45□□□□□ -0.58
USH1C-201ENST00000005226 SGK494Q96LW2 274 aa11.45□□□□□ -0.58
USH1C-201ENST00000005226 PRO3102Q9H379 93 aa11.45□□□□□ -0.58
USH1C-201ENST00000005226 ZNF586Q9NXT0 402 aa11.45□□□□□ -0.58
USH1C-201ENST00000005226 CDC42EP3Q9UKI2 254 aa11.45□□□□□ -0.58
USH1C-201ENST00000005226 TRAV9-1A0A075B6T8 112 aa11.45□□□□□ -0.58
USH1C-201ENST00000005226 M0R1B8 84 aa11.45□□□□□ -0.58
USH1C-201ENST00000005226 CDX4O14627 284 aaPredicted RBP11.45□□□□□ -0.58
USH1C-201ENST00000005226 WT1P19544 449 aaPredicted RBP11.45□□□□□ -0.58
USH1C-201ENST00000005226 IBA57Q5T440 356 aaKnown RBP11.45□□□□□ -0.58
USH1C-201ENST00000005226 PPP1R35Q8TAP8 253 aa11.45□□□□□ -0.58
USH1C-201ENST00000005226 CCL13Q99616 98 aa11.45□□□□□ -0.58
USH1C-201ENST00000005226 TECRQ9NZ01 308 aaKnown RBP11.45□□□□□ -0.58
USH1C-201ENST00000005226 TEX50A0A1B0GTY4 177 aa11.44□□□□□ -0.58
USH1C-201ENST00000005226 IGLV1-44P01699 117 aa11.44□□□□□ -0.58
USH1C-201ENST00000005226 Q6ZVH6 145 aa11.44□□□□□ -0.58
USH1C-201ENST00000005226 CHODLQ9H9P2 273 aa11.44□□□□□ -0.58
USH1C-201ENST00000005226 PLXNB1O43157 2135 aa11.44□□□□□ -0.58
USH1C-201ENST00000005226 C3orf79P0CE67 100 aa11.44□□□□□ -0.58
USH1C-201ENST00000005226 PYYP10082 97 aa11.44□□□□□ -0.58
USH1C-201ENST00000005226 SLAQ13239 276 aa11.44□□□□□ -0.58
USH1C-201ENST00000005226 CR1LQ2VPA4 569 aa11.44□□□□□ -0.58
USH1C-201ENST00000005226 DMRTA1Q5VZB9 504 aa11.44□□□□□ -0.58
USH1C-201ENST00000005226 NIT1Q86X76 327 aa11.44□□□□□ -0.58
USH1C-201ENST00000005226 FAM216BQ8N7L0 139 aa11.44□□□□□ -0.58
USH1C-201ENST00000005226 ZNF71Q9NQZ8 489 aaPredicted RBP11.44□□□□□ -0.58
USH1C-201ENST00000005226 KBTBD11-OT1A0A1B0GTJ5 212 aa11.44□□□□□ -0.58
USH1C-201ENST00000005226 C19orf67A6NJJ6 358 aa11.44□□□□□ -0.58
USH1C-201ENST00000005226 E7EUB6 86 aa11.44□□□□□ -0.58
USH1C-201ENST00000005226 GPR6P46095 362 aaPredicted RBP11.44□□□□□ -0.58
USH1C-201ENST00000005226 STARD4Q96DR4 205 aa11.44□□□□□ -0.58
USH1C-201ENST00000005226 TMEM167BQ9NRX6 74 aa11.44□□□□□ -0.58
USH1C-201ENST00000005226 LY96Q9Y6Y9 160 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms