RNA–Protein interactions for RNA: ENSMUST00000076265.12

Upf3b-201, Transcript of UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3b, Length 2,344 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3b-201ENSMUST00000076265 Ifi30Q9ESY9 248 aa7.52□□□□□ -1.2
Upf3b-201ENSMUST00000076265 Lsm4Q9QXA5 137 aaKnown RBP7.52□□□□□ -1.2
Upf3b-201ENSMUST00000076265 Chd7A2AJK6 2986 aaKnown RBP7.52□□□□□ -1.21
Upf3b-201ENSMUST00000076265 Plxna3P70208 1872 aa7.52□□□□□ -1.21
Upf3b-201ENSMUST00000076265 Scn1aA2APX8 2009 aa7.52□□□□□ -1.21
Upf3b-201ENSMUST00000076265 A0A286YDM5 308 aa7.52□□□□□ -1.21
Upf3b-201ENSMUST00000076265 Zfp81B8JJZ7 531 aa7.52□□□□□ -1.21
Upf3b-201ENSMUST00000076265 S100zB9EJL3 99 aa7.52□□□□□ -1.21
Upf3b-201ENSMUST00000076265 Olfr1185-ps1F6XP16 303 aa7.52□□□□□ -1.21
Upf3b-201ENSMUST00000076265 Sftpa1P35242 248 aa7.52□□□□□ -1.21
Upf3b-201ENSMUST00000076265 TspoP50637 169 aa7.52□□□□□ -1.21
Upf3b-201ENSMUST00000076265 A230072I06RikQ3UUJ8 172 aa7.52□□□□□ -1.21
Upf3b-201ENSMUST00000076265 Psg25Q497W1 475 aa7.52□□□□□ -1.21
Upf3b-201ENSMUST00000076265 Trav3-1Q5R1I8 114 aa7.52□□□□□ -1.21
Upf3b-201ENSMUST00000076265 Zfp455Q7M6X9 461 aa7.52□□□□□ -1.21
Upf3b-201ENSMUST00000076265 Atg4dQ8BGV9 474 aa7.52□□□□□ -1.21
Upf3b-201ENSMUST00000076265 Fjx1Q8BQB4 450 aa7.52□□□□□ -1.21
Upf3b-201ENSMUST00000076265 Gm5468Q8C3D3 155 aa7.52□□□□□ -1.21
Upf3b-201ENSMUST00000076265 Taf10Q8K0H5 218 aa7.52□□□□□ -1.21
Upf3b-201ENSMUST00000076265 Cant1Q8VCF1 403 aa7.52□□□□□ -1.21
Upf3b-201ENSMUST00000076265 Cmpk1Q9DBP5 196 aa7.52□□□□□ -1.21
Upf3b-201ENSMUST00000076265 C2cd4aE9Q861 334 aa7.51□□□□□ -1.21
Upf3b-201ENSMUST00000076265 Vmn1r25H3BLP0 302 aa7.51□□□□□ -1.21
Upf3b-201ENSMUST00000076265 Gm8298J3QPI0 401 aa7.51□□□□□ -1.21
Upf3b-201ENSMUST00000076265 Scrg1O88745 98 aa7.51□□□□□ -1.21
Upf3b-201ENSMUST00000076265 P01753 117 aa7.51□□□□□ -1.21
Upf3b-201ENSMUST00000076265 P01819 144 aa7.51□□□□□ -1.21
Upf3b-201ENSMUST00000076265 B020031M17RikQ3UT11 173 aa7.51□□□□□ -1.21
Upf3b-201ENSMUST00000076265 Gm20852Q5M8R5 227 aa7.51□□□□□ -1.21
Upf3b-201ENSMUST00000076265 Fkbp3Q62446 224 aaKnown RBP7.51□□□□□ -1.21
Upf3b-201ENSMUST00000076265 Olfr1419Q7TQS2 343 aa7.51□□□□□ -1.21
Upf3b-201ENSMUST00000076265 C2cd4bQ80XU5 340 aa7.51□□□□□ -1.21
Upf3b-201ENSMUST00000076265 Rbms3Q8BWL5 431 aaKnown RBP7.51□□□□□ -1.21
Upf3b-201ENSMUST00000076265 Prodh2Q8VCZ9 456 aa7.51□□□□□ -1.21
Upf3b-201ENSMUST00000076265 Olfr1030Q8VFL5 318 aa7.51□□□□□ -1.21
Upf3b-201ENSMUST00000076265 Stard4Q99JV5 224 aa7.51□□□□□ -1.21
Upf3b-201ENSMUST00000076265 TecrQ9CY27 308 aa7.51□□□□□ -1.21
Upf3b-201ENSMUST00000076265 Tmem86aQ9D8N3 241 aa7.51□□□□□ -1.21
Upf3b-201ENSMUST00000076265 Ackr1Q9QUI6 334 aa7.51□□□□□ -1.21
Upf3b-201ENSMUST00000076265 Atg2bQ80XK6 2075 aa7.51□□□□□ -1.21
Upf3b-201ENSMUST00000076265 Wfdc11A2A5H7 82 aa7.51□□□□□ -1.21
Upf3b-201ENSMUST00000076265 Vmn2r16E9Q025 850 aa7.51□□□□□ -1.21
Upf3b-201ENSMUST00000076265 Vmn2r85G3UW56 850 aa7.51□□□□□ -1.21
Upf3b-201ENSMUST00000076265 Hsd17b12O70503 312 aa7.51□□□□□ -1.21
Upf3b-201ENSMUST00000076265 Fut9O88819 359 aa7.51□□□□□ -1.21
Upf3b-201ENSMUST00000076265 Klk1b3P00756 261 aa7.51□□□□□ -1.21
Upf3b-201ENSMUST00000076265 P01631 113 aa7.51□□□□□ -1.21
Upf3b-201ENSMUST00000076265 Wnt1P04426 370 aa7.51□□□□□ -1.21
Upf3b-201ENSMUST00000076265 Pou2f3P31362 431 aa7.51□□□□□ -1.21
Upf3b-201ENSMUST00000076265 Igfbp3P47878 292 aa7.51□□□□□ -1.21
Upf3b-201ENSMUST00000076265 Slc26a10Q5EBI0 492 aa7.51□□□□□ -1.21
Upf3b-201ENSMUST00000076265 Cyb561a3Q6P1H1 242 aa7.51□□□□□ -1.21
Upf3b-201ENSMUST00000076265 Ffar1Q76JU9 300 aa7.51□□□□□ -1.21
Upf3b-201ENSMUST00000076265 Olfr1026Q7TR90 307 aa7.51□□□□□ -1.21
Upf3b-201ENSMUST00000076265 Reep1Q8BGH4 201 aa7.51□□□□□ -1.21
Upf3b-201ENSMUST00000076265 Scn3bQ8BHK2 215 aa7.51□□□□□ -1.21
Upf3b-201ENSMUST00000076265 Ubald2Q8BQH4 164 aa7.51□□□□□ -1.21
Upf3b-201ENSMUST00000076265 Mptx1Q8R1M8 219 aa7.51□□□□□ -1.21
Upf3b-201ENSMUST00000076265 Angptl7Q8R1Q3 337 aa7.51□□□□□ -1.21
Upf3b-201ENSMUST00000076265 Olfr502Q8VG09 314 aa7.51□□□□□ -1.21
Upf3b-201ENSMUST00000076265 Fam49bQ921M7 324 aa7.51□□□□□ -1.21
Upf3b-201ENSMUST00000076265 Eif2b1Q99LC8 305 aa7.51□□□□□ -1.21
Upf3b-201ENSMUST00000076265 Cbll1Q9JIY2 491 aa7.51□□□□□ -1.21
Upf3b-201ENSMUST00000076265 Tbx21Q9JKD8 530 aa7.51□□□□□ -1.21
Upf3b-201ENSMUST00000076265 Zbp1Q9QY24 411 aa7.51□□□□□ -1.21
Upf3b-201ENSMUST00000076265 Plekhb1Q9QYE9 243 aa7.51□□□□□ -1.21
Upf3b-201ENSMUST00000076265 Stub1Q9WUD1 304 aa7.51□□□□□ -1.21
Upf3b-201ENSMUST00000076265 Frem3Q5H8B9 2123 aa7.51□□□□□ -1.21
Upf3b-201ENSMUST00000076265 Gm10778A0A087WNP5 499 aa7.5□□□□□ -1.21
Upf3b-201ENSMUST00000076265 Olfr1118A0A0J9YUE7 307 aa7.5□□□□□ -1.21
Upf3b-201ENSMUST00000076265 Zfp599E9PWP1 548 aa7.5□□□□□ -1.21
Upf3b-201ENSMUST00000076265 Lgals9O08573 353 aaKnown RBP7.5□□□□□ -1.21
Upf3b-201ENSMUST00000076265 P06329 120 aa7.5□□□□□ -1.21
Upf3b-201ENSMUST00000076265 Cox7a2P48771 83 aa7.5□□□□□ -1.21
Upf3b-201ENSMUST00000076265 ShbgP97497 403 aa7.5□□□□□ -1.21
Upf3b-201ENSMUST00000076265 Olfr43Q7TRX1 313 aa7.5□□□□□ -1.21
Upf3b-201ENSMUST00000076265 CblcQ80XL1 496 aa7.5□□□□□ -1.21
Upf3b-201ENSMUST00000076265 Cdk3Q80YP0 303 aa7.5□□□□□ -1.21
Upf3b-201ENSMUST00000076265 Cbln2Q8BGU2 224 aa7.5□□□□□ -1.21
Upf3b-201ENSMUST00000076265 Aph1bQ8C7N7 257 aa7.5□□□□□ -1.21
Upf3b-201ENSMUST00000076265 Taf9Q8VI33 264 aa7.5□□□□□ -1.21
Upf3b-201ENSMUST00000076265 QprtQ91X91 299 aa7.5□□□□□ -1.21
Upf3b-201ENSMUST00000076265 EedQ921E6 441 aaKnown RBP7.5□□□□□ -1.21
Upf3b-201ENSMUST00000076265 SmagpQ99KC7 97 aa7.5□□□□□ -1.21
Upf3b-201ENSMUST00000076265 Exosc1Q9DAA6 195 aaKnown RBP7.5□□□□□ -1.21
Upf3b-201ENSMUST00000076265 Gm45808A0A1B0GSH8 263 aa7.5□□□□□ -1.21
Upf3b-201ENSMUST00000076265 Gm6812B1AXU1 112 aa7.5□□□□□ -1.21
Upf3b-201ENSMUST00000076265 Vmn1r224E9PWK2 298 aa7.5□□□□□ -1.21
Upf3b-201ENSMUST00000076265 Vmn2r114E9Q281 856 aa7.5□□□□□ -1.21
Upf3b-201ENSMUST00000076265 H3BKT1 185 aa7.5□□□□□ -1.21
Upf3b-201ENSMUST00000076265 1700020N15RikL7MTX3 112 aa7.5□□□□□ -1.21
Upf3b-201ENSMUST00000076265 Ndufb11O09111 151 aa7.5□□□□□ -1.21
Upf3b-201ENSMUST00000076265 Nthl1O35980 300 aa7.5□□□□□ -1.21
Upf3b-201ENSMUST00000076265 P01747 120 aa7.5□□□□□ -1.21
Upf3b-201ENSMUST00000076265 SnrpfP62307 86 aaKnown RBP7.5□□□□□ -1.21
Upf3b-201ENSMUST00000076265 Lrrc52Q5M8M9 314 aa7.5□□□□□ -1.21
Upf3b-201ENSMUST00000076265 Zdhhc18Q5Y5T2 380 aa7.5□□□□□ -1.21
Upf3b-201ENSMUST00000076265 Rcor3Q6PGA0 451 aa7.5□□□□□ -1.21
Upf3b-201ENSMUST00000076265 Olfr1500Q7TQQ3 311 aa7.5□□□□□ -1.21
Upf3b-201ENSMUST00000076265 Olfr714Q7TRN0 317 aa7.5□□□□□ -1.21
Retrieved 100 of 22,080 RNA–protein pairs in 44.3 ms