RNA–Protein interactions for RNA: ENST00000641939.1

PHGDH-231, Transcript of phosphoglycerate dehydrogenase, human

Gene PHGDH, Length 540 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PHGDH-231	ENST00000641939	NDUFA4L2	Q9NRX3	87 aa		11.49	□□□□□ -0.57
PHGDH-231	ENST00000641939	PRND	Q9UKY0	176 aa		11.49	□□□□□ -0.57
PHGDH-231	ENST00000641939	NSG2	Q9Y328	171 aa		11.49	□□□□□ -0.57
PHGDH-231	ENST00000641939	IGLV11-55	A0A075B6I3	123 aa		11.48	□□□□□ -0.57
PHGDH-231	ENST00000641939	PI3	P19957	117 aa		11.48	□□□□□ -0.57
PHGDH-231	ENST00000641939	PPP5C	P53041	499 aa		11.48	□□□□□ -0.57
PHGDH-231	ENST00000641939	PIGP	P57054	158 aa		11.48	□□□□□ -0.57
PHGDH-231	ENST00000641939	SCGB2B2	Q4G0G5	96 aa		11.48	□□□□□ -0.57
PHGDH-231	ENST00000641939	IL34	Q6ZMJ4	242 aa		11.48	□□□□□ -0.57
PHGDH-231	ENST00000641939	OR10W1	Q8NGF6	305 aa		11.48	□□□□□ -0.57
PHGDH-231	ENST00000641939	MCFD2	Q8NI22	146 aa		11.48	□□□□□ -0.57
PHGDH-231	ENST00000641939	ZFAND1	Q8TCF1	268 aa		11.48	□□□□□ -0.57
PHGDH-231	ENST00000641939	EEF1AKMT3	Q96AZ1	226 aa		11.48	□□□□□ -0.57
PHGDH-231	ENST00000641939	SEC22A	Q96IW7	307 aa		11.48	□□□□□ -0.57
PHGDH-231	ENST00000641939	TSC22D3	Q99576	134 aa		11.48	□□□□□ -0.57
PHGDH-231	ENST00000641939	HINT2	Q9BX68	163 aa		11.48	□□□□□ -0.57
PHGDH-231	ENST00000641939	NXF2	Q9GZY0	626 aa	Known RBP	11.48	□□□□□ -0.57
PHGDH-231	ENST00000641939	FKBP11	Q9NYL4	201 aa		11.48	□□□□□ -0.57
PHGDH-231	ENST00000641939	OR51B2	Q9Y5P1	312 aa		11.48	□□□□□ -0.57
PHGDH-231	ENST00000641939	CCDC160	A6NGH7	325 aa		11.47	□□□□□ -0.57
PHGDH-231	ENST00000641939	PPP5D1	E7EU14	171 aa		11.47	□□□□□ -0.57
PHGDH-231	ENST00000641939	CYB5B	O43169	146 aa		11.47	□□□□□ -0.57
PHGDH-231	ENST00000641939	IGKV1-39	P01597	117 aa		11.47	□□□□□ -0.57
PHGDH-231	ENST00000641939	IGLV1-51	P01701	117 aa		11.47	□□□□□ -0.57
PHGDH-231	ENST00000641939	IGHV3-23	P01764	117 aa		11.47	□□□□□ -0.57
PHGDH-231	ENST00000641939	IGKV1D-39	P04432	117 aa		11.47	□□□□□ -0.57
PHGDH-231	ENST00000641939	SERPINE2	P07093	398 aa		11.47	□□□□□ -0.57
PHGDH-231	ENST00000641939	OR13C7	P0DN81	318 aa		11.47	□□□□□ -0.57
PHGDH-231	ENST00000641939	GP9	P14770	177 aa		11.47	□□□□□ -0.57
PHGDH-231	ENST00000641939	WT1-AS	Q06250	92 aa		11.47	□□□□□ -0.57
PHGDH-231	ENST00000641939	H2BFWT	Q7Z2G1	175 aa		11.47	□□□□□ -0.57
PHGDH-231	ENST00000641939	HAPLN4	Q86UW8	402 aa		11.47	□□□□□ -0.57
PHGDH-231	ENST00000641939	GDPD1	Q8N9F7	314 aa		11.47	□□□□□ -0.57
PHGDH-231	ENST00000641939	OR5B3	Q8NH48	314 aa		11.47	□□□□□ -0.57
PHGDH-231	ENST00000641939	TMEM14B	Q9NUH8	114 aa		11.47	□□□□□ -0.57
PHGDH-231	ENST00000641939	THYN1	Q9P016	225 aa		11.47	□□□□□ -0.57
PHGDH-231	ENST00000641939	COPZ2	Q9P299	210 aa		11.47	□□□□□ -0.57
PHGDH-231	ENST00000641939	PEMT	Q9UBM1	199 aa		11.47	□□□□□ -0.57
PHGDH-231	ENST00000641939	RSL24D1	Q9UHA3	163 aa	Known RBP	11.47	□□□□□ -0.57
PHGDH-231	ENST00000641939	TRBV7-1	A0A0A6YYK4	115 aa		11.46	□□□□□ -0.57
PHGDH-231	ENST00000641939	C15orf61	A6NNL5	157 aa		11.46	□□□□□ -0.57
PHGDH-231	ENST00000641939	DISC1	C4P0D8	188 aa		11.46	□□□□□ -0.57
PHGDH-231	ENST00000641939		H0Y980	276 aa		11.46	□□□□□ -0.57
PHGDH-231	ENST00000641939	GSTZ1	O43708	216 aa	Predicted RBP	11.46	□□□□□ -0.57
PHGDH-231	ENST00000641939	GGCT	O75223	188 aa	Known RBP	11.46	□□□□□ -0.57
PHGDH-231	ENST00000641939	CSN3	P07498	182 aa		11.46	□□□□□ -0.57
PHGDH-231	ENST00000641939	AKAIN1	P0CW23	69 aa		11.46	□□□□□ -0.57
PHGDH-231	ENST00000641939	TNFSF8	P32971	234 aa		11.46	□□□□□ -0.57
PHGDH-231	ENST00000641939	FAAP20	Q6NZ36	180 aa		11.46	□□□□□ -0.57
PHGDH-231	ENST00000641939	CLEC19A	Q6UXS0	136 aa		11.46	□□□□□ -0.57
PHGDH-231	ENST00000641939	CCDC71L	Q8N9Z2	235 aa		11.46	□□□□□ -0.57
PHGDH-231	ENST00000641939	OR13C8	Q8NGS7	320 aa		11.46	□□□□□ -0.57
PHGDH-231	ENST00000641939	OR4A16	Q8NH70	328 aa		11.46	□□□□□ -0.57
PHGDH-231	ENST00000641939	MARCH1	Q8TCQ1	289 aa		11.46	□□□□□ -0.57
PHGDH-231	ENST00000641939	LSM10	Q969L4	123 aa	Known RBP	11.46	□□□□□ -0.57
PHGDH-231	ENST00000641939	MRGPRF	Q96AM1	343 aa		11.46	□□□□□ -0.57
PHGDH-231	ENST00000641939	CXorf58	Q96LI9	332 aa		11.46	□□□□□ -0.57
PHGDH-231	ENST00000641939	CCDC140	Q96MF4	163 aa		11.46	□□□□□ -0.57
PHGDH-231	ENST00000641939	SIGLEC8	Q9NYZ4	499 aa		11.46	□□□□□ -0.57
PHGDH-231	ENST00000641939	DMRT1	Q9Y5R6	373 aa		11.46	□□□□□ -0.57
PHGDH-231	ENST00000641939		S4R3C0	116 aa		11.46	□□□□□ -0.57
PHGDH-231	ENST00000641939	FABP12	A6NFH5	140 aa		11.45	□□□□□ -0.58
PHGDH-231	ENST00000641939	MFSD2B	A6NFX1	497 aa		11.45	□□□□□ -0.58
PHGDH-231	ENST00000641939	DBX1	A6NMT0	343 aa		11.45	□□□□□ -0.58
PHGDH-231	ENST00000641939	CTSD	P07339	412 aa	Predicted RBP	11.45	□□□□□ -0.58
PHGDH-231	ENST00000641939	ARL3	P36405	182 aa		11.45	□□□□□ -0.58
PHGDH-231	ENST00000641939	OR4C16	Q8NGL9	310 aa		11.45	□□□□□ -0.58
PHGDH-231	ENST00000641939	TMEM56	Q96MV1	263 aa		11.45	□□□□□ -0.58
PHGDH-231	ENST00000641939	TP53RK	Q96S44	253 aa		11.45	□□□□□ -0.58
PHGDH-231	ENST00000641939	SOST	Q9BQB4	213 aa		11.45	□□□□□ -0.58
PHGDH-231	ENST00000641939	SMAD5-AS1	Q9Y6J3	95 aa		11.45	□□□□□ -0.58
PHGDH-231	ENST00000641939	C3orf85	A0A1B0GTC6	90 aa		11.44	□□□□□ -0.58
PHGDH-231	ENST00000641939	ANKRD20A5P	A0PJZ0	165 aa		11.44	□□□□□ -0.58
PHGDH-231	ENST00000641939	OR2C1	O95371	312 aa		11.44	□□□□□ -0.58
PHGDH-231	ENST00000641939	HLA-A	P01891	365 aa	Known RBP	11.44	□□□□□ -0.58
PHGDH-231	ENST00000641939	MECP2	P51608	486 aa	Known RBP	11.44	□□□□□ -0.58
PHGDH-231	ENST00000641939	SURF2	Q15527	256 aa	Predicted RBP	11.44	□□□□□ -0.58
PHGDH-231	ENST00000641939	SLC25A24	Q6NUK1	477 aa		11.44	□□□□□ -0.58
PHGDH-231	ENST00000641939	RBM38	Q9H0Z9	239 aa	Known RBP	11.44	□□□□□ -0.58
PHGDH-231	ENST00000641939	C14orf166	Q9Y224	244 aa	Known RBP	11.44	□□□□□ -0.58
PHGDH-231	ENST00000641939	F11R	Q9Y624	299 aa	Known RBP	11.44	□□□□□ -0.58
PHGDH-231	ENST00000641939	B3GALNT1	O75752	331 aa		11.43	□□□□□ -0.58
PHGDH-231	ENST00000641939	ATG12	O94817	140 aa		11.43	□□□□□ -0.58
PHGDH-231	ENST00000641939	CLEC3B	P05452	202 aa		11.43	□□□□□ -0.58
PHGDH-231	ENST00000641939	TRIM16L	Q309B1	348 aa		11.43	□□□□□ -0.58
PHGDH-231	ENST00000641939	GPHB5	Q86YW7	130 aa		11.43	□□□□□ -0.58
PHGDH-231	ENST00000641939	ZNF502	Q8TBZ5	544 aa		11.43	□□□□□ -0.58
PHGDH-231	ENST00000641939	VN1R17P	Q8TDU5	208 aa		11.43	□□□□□ -0.58
PHGDH-231	ENST00000641939	PRRT1	Q99946	306 aa		11.43	□□□□□ -0.58
PHGDH-231	ENST00000641939	ZNF701	M0R085	212 aa	Predicted RBP	11.42	□□□□□ -0.58
PHGDH-231	ENST00000641939	LGALS9	O00182	355 aa		11.42	□□□□□ -0.58
PHGDH-231	ENST00000641939	IGKV1-5	P01602	117 aa		11.42	□□□□□ -0.58
PHGDH-231	ENST00000641939	NHLRC4	P0CG21	123 aa	Predicted RBP	11.42	□□□□□ -0.58
PHGDH-231	ENST00000641939	UCP1	P25874	307 aa		11.42	□□□□□ -0.58
PHGDH-231	ENST00000641939	GPR183	P32249	361 aa		11.42	□□□□□ -0.58
PHGDH-231	ENST00000641939	AKR1C2	P52895	323 aa		11.42	□□□□□ -0.58
PHGDH-231	ENST00000641939	MFAP2	P55001	183 aa		11.42	□□□□□ -0.58
PHGDH-231	ENST00000641939	PRCD	Q00LT1	54 aa		11.42	□□□□□ -0.58
PHGDH-231	ENST00000641939	IZUMO4	Q1ZYL8	232 aa		11.42	□□□□□ -0.58
PHGDH-231	ENST00000641939	SP6	Q3SY56	376 aa		11.42	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms