RNA–Protein interactions for RNA: ENST00000641891.1

PHGDH-229, Transcript of phosphoglycerate dehydrogenase, human

Gene PHGDH, Length 2,175 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PHGDH-229	ENST00000641891	B2M	P61769	119 aa		13.79	□□□□□ -0.2
PHGDH-229	ENST00000641891	FABP9	Q0Z7S8	132 aa		13.79	□□□□□ -0.2
PHGDH-229	ENST00000641891	EFNB3	Q15768	340 aa		13.79	□□□□□ -0.2
PHGDH-229	ENST00000641891	C1QL4	Q86Z23	238 aa		13.79	□□□□□ -0.2
PHGDH-229	ENST00000641891	ABHD5	Q8WTS1	349 aa		13.79	□□□□□ -0.2
PHGDH-229	ENST00000641891	BET1L	Q9NYM9	111 aa		13.79	□□□□□ -0.2
PHGDH-229	ENST00000641891		B9A039	149 aa		13.78	□□□□□ -0.2
PHGDH-229	ENST00000641891	CCL21	O00585	134 aa		13.78	□□□□□ -0.2
PHGDH-229	ENST00000641891	UBE2C	O00762	179 aa		13.78	□□□□□ -0.2
PHGDH-229	ENST00000641891	CASP6	P55212	293 aa		13.78	□□□□□ -0.2
PHGDH-229	ENST00000641891	RPL23	P62829	140 aa	Known RBP	13.78	□□□□□ -0.2
PHGDH-229	ENST00000641891	PRB3	Q04118	309 aa	Predicted RBP	13.78	□□□□□ -0.2
PHGDH-229	ENST00000641891	KIAA0141	Q14154	515 aa	Predicted RBP	13.78	□□□□□ -0.2
PHGDH-229	ENST00000641891	SPATA31B1P	Q5VZV4	182 aa		13.78	□□□□□ -0.2
PHGDH-229	ENST00000641891	TEPP	Q6URK8	271 aa		13.78	□□□□□ -0.2
PHGDH-229	ENST00000641891	STPG3	Q8N7X2	389 aa		13.78	□□□□□ -0.2
PHGDH-229	ENST00000641891	OR5AN1	Q8NGI8	311 aa		13.78	□□□□□ -0.2
PHGDH-229	ENST00000641891	OR51G1	Q8NGK1	321 aa		13.78	□□□□□ -0.2
PHGDH-229	ENST00000641891	RAB1C	Q92928	201 aa		13.78	□□□□□ -0.2
PHGDH-229	ENST00000641891	NEIL1	Q96FI4	390 aa	Predicted RBP	13.78	□□□□□ -0.2
PHGDH-229	ENST00000641891	CLDN34	H7C241	214 aa		13.78	□□□□□ -0.2
PHGDH-229	ENST00000641891	IGHV2-5	P01817	119 aa		13.78	□□□□□ -0.2
PHGDH-229	ENST00000641891	TMEM155	Q4W5P6	130 aa		13.78	□□□□□ -0.2
PHGDH-229	ENST00000641891	CST9LP1	Q5W188	147 aa		13.78	□□□□□ -0.2
PHGDH-229	ENST00000641891	OSR1	Q8TAX0	266 aa	Predicted RBP	13.78	□□□□□ -0.2
PHGDH-229	ENST00000641891	NABP2	Q9BQ15	211 aa		13.78	□□□□□ -0.2
PHGDH-229	ENST00000641891	KAAG1	Q9UBP8	84 aa		13.78	□□□□□ -0.2
PHGDH-229	ENST00000641891	ZNF98	A6NK75	572 aa		13.77	□□□□□ -0.21
PHGDH-229	ENST00000641891		E7EUB6	86 aa		13.77	□□□□□ -0.21
PHGDH-229	ENST00000641891	RND2	P52198	227 aa		13.77	□□□□□ -0.21
PHGDH-229	ENST00000641891	MLANA	Q16655	118 aa		13.77	□□□□□ -0.21
PHGDH-229	ENST00000641891	C16orf82	Q7Z2V1	217 aa		13.77	□□□□□ -0.21
PHGDH-229	ENST00000641891	C12orf57	Q99622	126 aa		13.77	□□□□□ -0.21
PHGDH-229	ENST00000641891	TMEM204	Q9BSN7	226 aa		13.77	□□□□□ -0.21
PHGDH-229	ENST00000641891	POLE	Q07864	2286 aa		13.77	□□□□□ -0.21
PHGDH-229	ENST00000641891	TNC	P24821	2201 aa		13.77	□□□□□ -0.21
PHGDH-229	ENST00000641891	BSX	Q3C1V8	233 aa		13.76	□□□□□ -0.21
PHGDH-229	ENST00000641891	SPNS3	Q6ZMD2	512 aa		13.76	□□□□□ -0.21
PHGDH-229	ENST00000641891	ST6GALNAC6	Q969X2	333 aa		13.76	□□□□□ -0.21
PHGDH-229	ENST00000641891	FLYWCH2	Q96CP2	140 aa	Known RBP	13.76	□□□□□ -0.21
PHGDH-229	ENST00000641891	SEPSECS	Q9HD40	501 aa	Known RBP	13.76	□□□□□ -0.21
PHGDH-229	ENST00000641891	TMEM242	Q9NWH2	141 aa		13.76	□□□□□ -0.21
PHGDH-229	ENST00000641891	PCP4L1	A6NKN8	68 aa		13.76	□□□□□ -0.21
PHGDH-229	ENST00000641891	STAG3L2	P0CL84	134 aa		13.76	□□□□□ -0.21
PHGDH-229	ENST00000641891	STAG3L3	P0CL85	134 aa		13.76	□□□□□ -0.21
PHGDH-229	ENST00000641891	IGHV1-8	P0DP01	117 aa		13.76	□□□□□ -0.21
PHGDH-229	ENST00000641891	GNB1	P62873	340 aa		13.76	□□□□□ -0.21
PHGDH-229	ENST00000641891	TMEM177	Q53S58	311 aa		13.76	□□□□□ -0.21
PHGDH-229	ENST00000641891	C11orf42	Q8N5U0	333 aa		13.76	□□□□□ -0.21
PHGDH-229	ENST00000641891	NECAP1	Q8NC96	275 aa		13.76	□□□□□ -0.21
PHGDH-229	ENST00000641891	SOX15	O60248	233 aa		13.75	□□□□□ -0.21
PHGDH-229	ENST00000641891	RNASE2	P10153	161 aa	Known RBP	13.75	□□□□□ -0.21
PHGDH-229	ENST00000641891	C10orf55	Q5SWW7	151 aa		13.75	□□□□□ -0.21
PHGDH-229	ENST00000641891	MUC15	Q8N387	334 aa		13.75	□□□□□ -0.21
PHGDH-229	ENST00000641891	OR5B3	Q8NH48	314 aa		13.75	□□□□□ -0.21
PHGDH-229	ENST00000641891	ZNF596	Q8TC21	504 aa		13.75	□□□□□ -0.21
PHGDH-229	ENST00000641891	FAM210B	Q96KR6	192 aa		13.75	□□□□□ -0.21
PHGDH-229	ENST00000641891	DERL1	Q9BUN8	251 aa		13.75	□□□□□ -0.21
PHGDH-229	ENST00000641891	METTL1	Q9UBP6	276 aa	Known RBP	13.75	□□□□□ -0.21
PHGDH-229	ENST00000641891	IGKV1OR2-108	A0A075B7D4	117 aa		13.75	□□□□□ -0.21
PHGDH-229	ENST00000641891	AP4M1	O00189	453 aa		13.75	□□□□□ -0.21
PHGDH-229	ENST00000641891	FOXH1	O75593	365 aa		13.75	□□□□□ -0.21
PHGDH-229	ENST00000641891	UCN	P55089	124 aa		13.75	□□□□□ -0.21
PHGDH-229	ENST00000641891	ADORA2A-AS1	P86434	159 aa		13.75	□□□□□ -0.21
PHGDH-229	ENST00000641891	TMEM249	Q2WGJ8	235 aa		13.75	□□□□□ -0.21
PHGDH-229	ENST00000641891	LINC00311	Q8N616	119 aa		13.75	□□□□□ -0.21
PHGDH-229	ENST00000641891	OR5T1	Q8NG75	326 aa		13.75	□□□□□ -0.21
PHGDH-229	ENST00000641891	RITA1	Q96K30	269 aa		13.75	□□□□□ -0.21
PHGDH-229	ENST00000641891	FKBP11	Q9NYL4	201 aa		13.75	□□□□□ -0.21
PHGDH-229	ENST00000641891	IGF2R	P11717	2491 aa		13.75	□□□□□ -0.21
PHGDH-229	ENST00000641891	CXorf1	O96002	111 aa		13.74	□□□□□ -0.21
PHGDH-229	ENST00000641891	TRGC2	P03986	189 aa		13.74	□□□□□ -0.21
PHGDH-229	ENST00000641891	LINC00869	P0C866	280 aa		13.74	□□□□□ -0.21
PHGDH-229	ENST00000641891	RPL8	P62917	257 aa	Known RBP	13.74	□□□□□ -0.21
PHGDH-229	ENST00000641891	PRR20E	P86478	221 aa		13.74	□□□□□ -0.21
PHGDH-229	ENST00000641891	PRR20C	P86479	221 aa		13.74	□□□□□ -0.21
PHGDH-229	ENST00000641891	PRR20D	P86480	221 aa		13.74	□□□□□ -0.21
PHGDH-229	ENST00000641891	PRR20B	P86481	221 aa		13.74	□□□□□ -0.21
PHGDH-229	ENST00000641891	PRR20A	P86496	221 aa		13.74	□□□□□ -0.21
PHGDH-229	ENST00000641891	KLRB1	Q12918	225 aa		13.74	□□□□□ -0.21
PHGDH-229	ENST00000641891	TMEM186	Q96B77	213 aa		13.74	□□□□□ -0.21
PHGDH-229	ENST00000641891	COMMD5	Q9GZQ3	224 aa		13.74	□□□□□ -0.21
PHGDH-229	ENST00000641891	NDUFA4L2	Q9NRX3	87 aa		13.74	□□□□□ -0.21
PHGDH-229	ENST00000641891	IGHV3-72	A0A0B4J1Y9	119 aa		13.73	□□□□□ -0.21
PHGDH-229	ENST00000641891	IGLV2-23	P01705	113 aa		13.73	□□□□□ -0.21
PHGDH-229	ENST00000641891	GATA2	P23769	480 aa	Predicted RBP	13.73	□□□□□ -0.21
PHGDH-229	ENST00000641891	RPL29	P47914	159 aa	Known RBP	13.73	□□□□□ -0.21
PHGDH-229	ENST00000641891	FBXL19-AS1	Q494R0	122 aa		13.73	□□□□□ -0.21
PHGDH-229	ENST00000641891	C2orf83	Q53S99	150 aa		13.73	□□□□□ -0.21
PHGDH-229	ENST00000641891	PDPN	Q86YL7	162 aa		13.73	□□□□□ -0.21
PHGDH-229	ENST00000641891	C8orf31	Q8N9H6	132 aa		13.73	□□□□□ -0.21
PHGDH-229	ENST00000641891	ST6GALNAC3	Q8NDV1	305 aa		13.73	□□□□□ -0.21
PHGDH-229	ENST00000641891	OR4C13	Q8NGP0	309 aa		13.73	□□□□□ -0.21
PHGDH-229	ENST00000641891	OR9G1	Q8NH87	305 aa		13.73	□□□□□ -0.21
PHGDH-229	ENST00000641891	CTDSP1	Q9GZU7	261 aa		13.73	□□□□□ -0.21
PHGDH-229	ENST00000641891	TPSG1	Q9NRR2	321 aa		13.73	□□□□□ -0.21
PHGDH-229	ENST00000641891	KCNIP2	Q9NS61	270 aa		13.73	□□□□□ -0.21
PHGDH-229	ENST00000641891	AURKAIP1	Q9NWT8	199 aa	Predicted RBP	13.73	□□□□□ -0.21
PHGDH-229	ENST00000641891	CGB1	A6NKQ9	187 aa		13.73	□□□□□ -0.21
PHGDH-229	ENST00000641891	ACTL6B	O94805	426 aa		13.73	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms