RNA–Protein interactions for RNA: ENST00000641847.1

PHGDH-228, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 692 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-228ENST00000641847 FOXA2Q9Y261 457 aaPredicted RBP7.43□□□□□ -1.22
PHGDH-228ENST00000641847 OR51B2Q9Y5P1 312 aa7.43□□□□□ -1.22
PHGDH-228ENST00000641847 M0QZK8 103 aa7.42□□□□□ -1.22
PHGDH-228ENST00000641847 FCN1O00602 326 aa7.42□□□□□ -1.22
PHGDH-228ENST00000641847 ST8SIA3O43173 380 aa7.42□□□□□ -1.22
PHGDH-228ENST00000641847 GPR137BO60478 399 aa7.42□□□□□ -1.22
PHGDH-228ENST00000641847 PITX3O75364 302 aa7.42□□□□□ -1.22
PHGDH-228ENST00000641847 ACTL6BO94805 426 aa7.42□□□□□ -1.22
PHGDH-228ENST00000641847 AMY1AP04745 511 aa7.42□□□□□ -1.22
PHGDH-228ENST00000641847 FGF2P09038 288 aa7.42□□□□□ -1.22
PHGDH-228ENST00000641847 GIPP09681 153 aaPredicted RBP7.42□□□□□ -1.22
PHGDH-228ENST00000641847 S100A10P60903 97 aa7.42□□□□□ -1.22
PHGDH-228ENST00000641847 TNXAQ16473 311 aa7.42□□□□□ -1.22
PHGDH-228ENST00000641847 SPINK9Q5DT21 86 aa7.42□□□□□ -1.22
PHGDH-228ENST00000641847 AKAP14Q86UN6 197 aa7.42□□□□□ -1.22
PHGDH-228ENST00000641847 ZNF429Q86V71 674 aa7.42□□□□□ -1.22
PHGDH-228ENST00000641847 WDR89Q96FK6 387 aaPredicted RBP7.42□□□□□ -1.22
PHGDH-228ENST00000641847 NMES1Q9C002 83 aa7.42□□□□□ -1.22
PHGDH-228ENST00000641847 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.42□□□□□ -1.22
PHGDH-228ENST00000641847 TMEM14BQ9NUH8 114 aa7.42□□□□□ -1.22
PHGDH-228ENST00000641847 RYR2Q92736 4967 aa7.42□□□□□ -1.22
PHGDH-228ENST00000641847 CCNKO75909 580 aa7.41□□□□□ -1.22
PHGDH-228ENST00000641847 CNIH1O95406 144 aa7.41□□□□□ -1.22
PHGDH-228ENST00000641847 IFNA17P01571 189 aa7.41□□□□□ -1.22
PHGDH-228ENST00000641847 HLA-DRB1P01911 266 aa7.41□□□□□ -1.22
PHGDH-228ENST00000641847 MAS1LP35410 378 aa7.41□□□□□ -1.22
PHGDH-228ENST00000641847 NKX2-1P43699 371 aaPredicted RBP7.41□□□□□ -1.22
PHGDH-228ENST00000641847 RPL27AP46776 148 aaKnown RBP7.41□□□□□ -1.22
PHGDH-228ENST00000641847 SSBP2P81877 361 aaPredicted RBP7.41□□□□□ -1.22
PHGDH-228ENST00000641847 CYCSP99999 105 aaKnown RBP7.41□□□□□ -1.22
PHGDH-228ENST00000641847 NDPQ00604 133 aa7.41□□□□□ -1.22
PHGDH-228ENST00000641847 LRRC37A5PQ49AS3 106 aa7.41□□□□□ -1.22
PHGDH-228ENST00000641847 AARDQ4LEZ3 155 aa7.41□□□□□ -1.22
PHGDH-228ENST00000641847 CXorf66Q5JRM2 361 aaPredicted RBP7.41□□□□□ -1.22
PHGDH-228ENST00000641847 C9orf152Q5JTZ5 239 aa7.41□□□□□ -1.22
PHGDH-228ENST00000641847 OR5B3Q8NH48 314 aa7.41□□□□□ -1.22
PHGDH-228ENST00000641847 GRPEL2Q8TAA5 225 aa7.41□□□□□ -1.22
PHGDH-228ENST00000641847 ABHD5Q8WTS1 349 aa7.41□□□□□ -1.22
PHGDH-228ENST00000641847 ASB13Q8WXK3 278 aa7.41□□□□□ -1.22
PHGDH-228ENST00000641847 ARPC1AQ92747 370 aa7.41□□□□□ -1.22
PHGDH-228ENST00000641847 FYTTD1Q96QD9 318 aaKnown RBP7.41□□□□□ -1.22
PHGDH-228ENST00000641847 HSPB9Q9BQS6 159 aa7.41□□□□□ -1.22
PHGDH-228ENST00000641847 COMMD5Q9GZQ3 224 aa7.41□□□□□ -1.22
PHGDH-228ENST00000641847 MAGT1Q9H0U3 335 aa7.41□□□□□ -1.22
PHGDH-228ENST00000641847 RANGRFQ9HD47 186 aaPredicted RBP7.41□□□□□ -1.22
PHGDH-228ENST00000641847 AURKAIP1Q9NWT8 199 aaPredicted RBP7.41□□□□□ -1.22
PHGDH-228ENST00000641847 FKBP11Q9NYL4 201 aa7.41□□□□□ -1.22
PHGDH-228ENST00000641847 HSPB7Q9UBY9 170 aa7.41□□□□□ -1.22
PHGDH-228ENST00000641847 ZNF257Q9Y2Q1 563 aa7.41□□□□□ -1.22
PHGDH-228ENST00000641847 LSM5Q9Y4Y9 91 aaKnown RBP7.41□□□□□ -1.22
PHGDH-228ENST00000641847 IGHV7-81A0A0B4J1V7 117 aa7.4□□□□□ -1.22
PHGDH-228ENST00000641847 TEX50A0A1B0GTY4 177 aa7.4□□□□□ -1.22
PHGDH-228ENST00000641847 FAM90A26D6RGX4 464 aa7.4□□□□□ -1.22
PHGDH-228ENST00000641847 WRBO00258 174 aa7.4□□□□□ -1.22
PHGDH-228ENST00000641847 SSSCA1O60232 199 aa7.4□□□□□ -1.22
PHGDH-228ENST00000641847 MBPP02686 304 aaPredicted RBP7.4□□□□□ -1.22
PHGDH-228ENST00000641847 HOXA1P49639 335 aaPredicted RBP7.4□□□□□ -1.22
PHGDH-228ENST00000641847 SPCS3P61009 180 aa7.4□□□□□ -1.22
PHGDH-228ENST00000641847 RAP2BP61225 183 aa7.4□□□□□ -1.22
PHGDH-228ENST00000641847 HSPE1P61604 102 aaKnown RBP7.4□□□□□ -1.22
PHGDH-228ENST00000641847 CX3CL1P78423 397 aa7.4□□□□□ -1.22
PHGDH-228ENST00000641847 PRCDQ00LT1 54 aa7.4□□□□□ -1.22
PHGDH-228ENST00000641847 TNFRSF9Q07011 255 aa7.4□□□□□ -1.22
PHGDH-228ENST00000641847 IL15RAQ13261 267 aa7.4□□□□□ -1.22
PHGDH-228ENST00000641847 RAB32Q13637 225 aa7.4□□□□□ -1.22
PHGDH-228ENST00000641847 FXYD3Q14802 87 aa7.4□□□□□ -1.22
PHGDH-228ENST00000641847 C11orf87Q6NUJ2 197 aa7.4□□□□□ -1.22
PHGDH-228ENST00000641847 OR1L8Q8NGR8 309 aa7.4□□□□□ -1.22
PHGDH-228ENST00000641847 OR52E5Q8NH55 327 aa7.4□□□□□ -1.22
PHGDH-228ENST00000641847 PPP1R1CQ8WVI7 109 aa7.4□□□□□ -1.22
PHGDH-228ENST00000641847 SRSF12Q8WXF0 261 aaKnown RBP7.4□□□□□ -1.22
PHGDH-228ENST00000641847 HINT2Q9BX68 163 aa7.4□□□□□ -1.22
PHGDH-228ENST00000641847 NPFFR1Q9GZQ6 430 aa7.4□□□□□ -1.22
PHGDH-228ENST00000641847 RBKSQ9H477 322 aa7.4□□□□□ -1.22
PHGDH-228ENST00000641847 C16orf95Q9H693 158 aa7.4□□□□□ -1.22
PHGDH-228ENST00000641847 PLEKHA3Q9HB20 300 aa7.4□□□□□ -1.22
PHGDH-228ENST00000641847 PARP11Q9NR21 331 aa7.4□□□□□ -1.22
PHGDH-228ENST00000641847 CACFD1Q9UGQ2 172 aa7.4□□□□□ -1.22
PHGDH-228ENST00000641847 RCL1Q9Y2P8 373 aaKnown RBP7.4□□□□□ -1.22
PHGDH-228ENST00000641847 TET2Q6N021 2002 aaPredicted RBP7.4□□□□□ -1.23
PHGDH-228ENST00000641847 CGB1A6NKQ9 187 aa7.39□□□□□ -1.23
PHGDH-228ENST00000641847 CEBPZOSA8MTT3 80 aa7.39□□□□□ -1.23
PHGDH-228ENST00000641847 SMLR1H3BR10 107 aa7.39□□□□□ -1.23
PHGDH-228ENST00000641847 K7EPK0 472 aa7.39□□□□□ -1.23
PHGDH-228ENST00000641847 MED6O75586 246 aa7.39□□□□□ -1.23
PHGDH-228ENST00000641847 IAPPP10997 89 aa7.39□□□□□ -1.23
PHGDH-228ENST00000641847 POLR2GP62487 172 aaKnown RBP eCLIP7.39□□□□□ -1.23
PHGDH-228ENST00000641847 BLCAPP62952 87 aa7.39□□□□□ -1.23
PHGDH-228ENST00000641847 ID3Q02535 119 aa7.39□□□□□ -1.23
PHGDH-228ENST00000641847 CD69Q07108 199 aa7.39□□□□□ -1.23
PHGDH-228ENST00000641847 OXLD1Q5BKU9 147 aa7.39□□□□□ -1.23
PHGDH-228ENST00000641847 DEFB121Q5J5C9 76 aa7.39□□□□□ -1.23
PHGDH-228ENST00000641847 ZNF562Q6V9R5 426 aa7.39□□□□□ -1.23
PHGDH-228ENST00000641847 OR2T35Q8NGX2 323 aa7.39□□□□□ -1.23
PHGDH-228ENST00000641847 DTD1Q8TEA8 209 aa7.39□□□□□ -1.23
PHGDH-228ENST00000641847 ST6GAL2Q96JF0 529 aa7.39□□□□□ -1.23
PHGDH-228ENST00000641847 FAM103A1Q9BTL3 118 aaKnown RBP7.39□□□□□ -1.23
PHGDH-228ENST00000641847 ENY2Q9NPA8 101 aa7.39□□□□□ -1.23
PHGDH-228ENST00000641847 NDUFA4L2Q9NRX3 87 aa7.39□□□□□ -1.23
PHGDH-228ENST00000641847 ZFP57Q9NU63 452 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms