RNA–Protein interactions for RNA: ENST00000640648.1

NECAP1-227, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 5,166 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-227ENST00000640648 CX3CL1P78423 397 aa7.05□□□□□ -1.28
NECAP1-227ENST00000640648 ID3Q02535 119 aa7.05□□□□□ -1.28
NECAP1-227ENST00000640648 DEFB108BQ8NET1 73 aa7.05□□□□□ -1.28
NECAP1-227ENST00000640648 DYNLRB1Q9NP97 96 aa7.05□□□□□ -1.28
NECAP1-227ENST00000640648 TRAV26-1A0A087WT03 109 aa7.05□□□□□ -1.28
NECAP1-227ENST00000640648 CRYAAP02489 173 aa7.05□□□□□ -1.28
NECAP1-227ENST00000640648 IGFBP3P17936 291 aaPredicted RBP7.05□□□□□ -1.28
NECAP1-227ENST00000640648 COLCA1Q6ZS62 124 aa7.05□□□□□ -1.28
NECAP1-227ENST00000640648 GATAD1Q8WUU5 269 aa7.05□□□□□ -1.28
NECAP1-227ENST00000640648 FGF11Q92914 225 aa7.05□□□□□ -1.28
NECAP1-227ENST00000640648 MDC1Q14676 2089 aaKnown RBP7.05□□□□□ -1.28
NECAP1-227ENST00000640648 SMAD7O15105 426 aaKnown RBP7.04□□□□□ -1.28
NECAP1-227ENST00000640648 COX8AP10176 69 aa7.04□□□□□ -1.28
NECAP1-227ENST00000640648 PRSS8Q16651 343 aa7.04□□□□□ -1.28
NECAP1-227ENST00000640648 ZNF525Q8N782 197 aa7.04□□□□□ -1.28
NECAP1-227ENST00000640648 FOXS1O43638 330 aa7.04□□□□□ -1.28
NECAP1-227ENST00000640648 CSN3P07498 182 aa7.04□□□□□ -1.28
NECAP1-227ENST00000640648 IGLC1P0CG04 106 aa7.04□□□□□ -1.28
NECAP1-227ENST00000640648 GUSBP11Q6P575 273 aa7.04□□□□□ -1.28
NECAP1-227ENST00000640648 SPEM1Q8N4L4 309 aa7.04□□□□□ -1.28
NECAP1-227ENST00000640648 VGLL1Q99990 258 aa7.04□□□□□ -1.28
NECAP1-227ENST00000640648 C1QTNF4Q9BXJ3 329 aa7.04□□□□□ -1.28
NECAP1-227ENST00000640648 TNFSF14O43557 240 aa7.04□□□□□ -1.28
NECAP1-227ENST00000640648 C8orf88P0DMB2 117 aa7.04□□□□□ -1.28
NECAP1-227ENST00000640648 EVI2AP22794 236 aa7.04□□□□□ -1.28
NECAP1-227ENST00000640648 C18orf32Q8TCD1 76 aa7.04□□□□□ -1.28
NECAP1-227ENST00000640648 MRGPRFQ96AM1 343 aa7.04□□□□□ -1.28
NECAP1-227ENST00000640648 PARP14Q460N5 1801 aa7.04□□□□□ -1.28
NECAP1-227ENST00000640648 ACYP1P07311 99 aa7.04□□□□□ -1.28
NECAP1-227ENST00000640648 C16orf54Q6UWD8 224 aa7.04□□□□□ -1.28
NECAP1-227ENST00000640648 PPP1R27Q86WC6 154 aa7.04□□□□□ -1.28
NECAP1-227ENST00000640648 CXorf67Q86X51 503 aaPredicted RBP7.04□□□□□ -1.28
NECAP1-227ENST00000640648 HDHD3Q9BSH5 251 aaPredicted RBP7.04□□□□□ -1.28
NECAP1-227ENST00000640648 PHF7Q9BWX1 381 aaPredicted RBP7.04□□□□□ -1.28
NECAP1-227ENST00000640648 LAMTOR3Q9UHA4 124 aa7.04□□□□□ -1.28
NECAP1-227ENST00000640648 MPC1Q9Y5U8 109 aa7.04□□□□□ -1.28
NECAP1-227ENST00000640648 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.03□□□□□ -1.28
NECAP1-227ENST00000640648 M0R3E3 92 aa7.03□□□□□ -1.28
NECAP1-227ENST00000640648 HBDP02042 147 aa7.03□□□□□ -1.28
NECAP1-227ENST00000640648 BGLAPP02818 100 aa7.03□□□□□ -1.28
NECAP1-227ENST00000640648 CCL11P51671 97 aa7.03□□□□□ -1.28
NECAP1-227ENST00000640648 CENPWQ5EE01 88 aa7.03□□□□□ -1.28
NECAP1-227ENST00000640648 SMIM20Q8N5G0 67 aa7.03□□□□□ -1.28
NECAP1-227ENST00000640648 OR5AN1Q8NGI8 311 aa7.03□□□□□ -1.28
NECAP1-227ENST00000640648 OR4A5Q8NH83 315 aa7.03□□□□□ -1.28
NECAP1-227ENST00000640648 MRAPQ8TCY5 172 aa7.03□□□□□ -1.28
NECAP1-227ENST00000640648 NHP2Q9NX24 153 aaKnown RBP7.03□□□□□ -1.28
NECAP1-227ENST00000640648 R4GN57 208 aa7.03□□□□□ -1.28
NECAP1-227ENST00000640648 PROB1E7EW31 1015 aa7.03□□□□□ -1.28
NECAP1-227ENST00000640648 DSCR4P56555 118 aaPredicted RBP7.03□□□□□ -1.28
NECAP1-227ENST00000640648 RPL31P62899 125 aaKnown RBP7.03□□□□□ -1.28
NECAP1-227ENST00000640648 TMEM256Q8N2U0 113 aa7.03□□□□□ -1.28
NECAP1-227ENST00000640648 H1FXQ92522 213 aaKnown RBP7.03□□□□□ -1.28
NECAP1-227ENST00000640648 A0A1W2PRE2 83 aa7.03□□□□□ -1.28
NECAP1-227ENST00000640648 YPEL1O60688 119 aa7.03□□□□□ -1.28
NECAP1-227ENST00000640648 IGHMP01871 453 aa7.03□□□□□ -1.28
NECAP1-227ENST00000640648 PLAURQ03405 335 aa7.03□□□□□ -1.28
NECAP1-227ENST00000640648 MRPL23Q16540 153 aaKnown RBP7.03□□□□□ -1.28
NECAP1-227ENST00000640648 RFESDQ8TAC1 157 aa7.03□□□□□ -1.28
NECAP1-227ENST00000640648 YPEL2Q96QA6 119 aa7.03□□□□□ -1.28
NECAP1-227ENST00000640648 RAB1BQ9H0U4 201 aa7.03□□□□□ -1.28
NECAP1-227ENST00000640648 ZNF831Q5JPB2 1677 aa7.03□□□□□ -1.28
NECAP1-227ENST00000640648 DPM2O94777 84 aa7.03□□□□□ -1.28
NECAP1-227ENST00000640648 CLDN14O95500 239 aa7.03□□□□□ -1.28
NECAP1-227ENST00000640648 CTSBP07858 339 aa7.03□□□□□ -1.28
NECAP1-227ENST00000640648 IL11P20809 199 aa7.03□□□□□ -1.28
NECAP1-227ENST00000640648 RPRMLQ8N4K4 120 aa7.03□□□□□ -1.28
NECAP1-227ENST00000640648 KIF26BQ2KJY2 2108 aa7.03□□□□□ -1.28
NECAP1-227ENST00000640648 LIPT2A6NK58 231 aa7.02□□□□□ -1.28
NECAP1-227ENST00000640648 ZNF688P0C7X2 276 aa7.02□□□□□ -1.28
NECAP1-227ENST00000640648 C10orf113Q5VZT2 155 aa7.02□□□□□ -1.28
NECAP1-227ENST00000640648 DRAM1Q8N682 238 aa7.02□□□□□ -1.28
NECAP1-227ENST00000640648 ST6GALNAC3Q8NDV1 305 aa7.02□□□□□ -1.28
NECAP1-227ENST00000640648 C8orf46Q8TAG6 207 aa7.02□□□□□ -1.28
NECAP1-227ENST00000640648 C1RLQ9NZP8 487 aa7.02□□□□□ -1.28
NECAP1-227ENST00000640648 PILRAQ9UKJ1 303 aa7.02□□□□□ -1.28
NECAP1-227ENST00000640648 ATP23Q9Y6H3 246 aa7.02□□□□□ -1.28
NECAP1-227ENST00000640648 TRAV2A0A0B4J234 112 aa7.02□□□□□ -1.29
NECAP1-227ENST00000640648 FAM90A9PA6NNJ1 464 aa7.02□□□□□ -1.29
NECAP1-227ENST00000640648 SRD5A2P31213 254 aa7.02□□□□□ -1.29
NECAP1-227ENST00000640648 TMEM30BQ3MIR4 351 aa7.02□□□□□ -1.29
NECAP1-227ENST00000640648 TMEM177Q53S58 311 aa7.02□□□□□ -1.29
NECAP1-227ENST00000640648 SPINK9Q5DT21 86 aa7.02□□□□□ -1.29
NECAP1-227ENST00000640648 C6orf15Q6UXA7 325 aaPredicted RBP7.02□□□□□ -1.29
NECAP1-227ENST00000640648 PAXXQ9BUH6 204 aa7.02□□□□□ -1.29
NECAP1-227ENST00000640648 NXT2Q9NPJ8 142 aaKnown RBP7.02□□□□□ -1.29
NECAP1-227ENST00000640648 NCOR1O75376 2440 aa7.02□□□□□ -1.29
NECAP1-227ENST00000640648 TRBV7-9A0A0J9YWB2 115 aa7.02□□□□□ -1.29
NECAP1-227ENST00000640648 TRACP01848 142 aa7.02□□□□□ -1.29
NECAP1-227ENST00000640648 CXorf66Q5JRM2 361 aaPredicted RBP7.02□□□□□ -1.29
NECAP1-227ENST00000640648 SLC35E4Q6ICL7 350 aa7.02□□□□□ -1.29
NECAP1-227ENST00000640648 C1orf122Q6ZSJ8 110 aa7.02□□□□□ -1.29
NECAP1-227ENST00000640648 C11orf68Q9H3H3 251 aaKnown RBP7.02□□□□□ -1.29
NECAP1-227ENST00000640648 EP300Q09472 2414 aaPredicted RBP7.02□□□□□ -1.29
NECAP1-227ENST00000640648 CKS2P33552 79 aa7.02□□□□□ -1.29
NECAP1-227ENST00000640648 LGALS4P56470 323 aa7.02□□□□□ -1.29
NECAP1-227ENST00000640648 SPSB3Q6PJ21 355 aa7.02□□□□□ -1.29
NECAP1-227ENST00000640648 Q6ZWC4 215 aa7.02□□□□□ -1.29
NECAP1-227ENST00000640648 NPCDR1Q9BY65 106 aa7.02□□□□□ -1.29
NECAP1-227ENST00000640648 NPFFR1Q9GZQ6 430 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms