RNA–Protein interactions for RNA: ENST00000639659.1

SYNE2-228, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 1,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-228ENST00000639659 C2CD4CQ8TF44 421 aa11.05□□□□□ -0.64
SYNE2-228ENST00000639659 CSTL1Q9H114 145 aa11.05□□□□□ -0.64
SYNE2-228ENST00000639659 ANXA10Q9UJ72 324 aa11.05□□□□□ -0.64
SYNE2-228ENST00000639659 IGLL5B9A064 214 aa11.04□□□□□ -0.64
SYNE2-228ENST00000639659 UPK2O00526 184 aa11.04□□□□□ -0.64
SYNE2-228ENST00000639659 FXYD4P59646 89 aa11.04□□□□□ -0.64
SYNE2-228ENST00000639659 KLK9Q2XQG4 91 aa11.04□□□□□ -0.64
SYNE2-228ENST00000639659 OR13F1Q8NGS4 319 aa11.04□□□□□ -0.64
SYNE2-228ENST00000639659 OR51H1Q8NH63 302 aa11.04□□□□□ -0.64
SYNE2-228ENST00000639659 VN1R17PQ8TDU5 208 aa11.04□□□□□ -0.64
SYNE2-228ENST00000639659 BSCL2Q96G97 398 aaPredicted RBP11.04□□□□□ -0.64
SYNE2-228ENST00000639659 AIFM2Q9BRQ8 373 aa11.04□□□□□ -0.64
SYNE2-228ENST00000639659 CHRDL1Q9BU40 450 aa11.04□□□□□ -0.64
SYNE2-228ENST00000639659 QTRT1Q9BXR0 403 aaKnown RBP11.04□□□□□ -0.64
SYNE2-228ENST00000639659 DCSTAMPQ9H295 470 aa11.04□□□□□ -0.64
SYNE2-228ENST00000639659 TMEM140Q9NV12 185 aa11.04□□□□□ -0.64
SYNE2-228ENST00000639659 KLK9Q9UKQ9 250 aa11.04□□□□□ -0.64
SYNE2-228ENST00000639659 HECTD4Q9Y4D8 3996 aa11.03□□□□□ -0.64
SYNE2-228ENST00000639659 TRAV1-2A0A0B4J238 106 aa11.03□□□□□ -0.64
SYNE2-228ENST00000639659 NDUFA4O00483 81 aa11.03□□□□□ -0.64
SYNE2-228ENST00000639659 CASQ2O14958 399 aaPredicted RBP11.03□□□□□ -0.64
SYNE2-228ENST00000639659 YIF1AO95070 293 aa11.03□□□□□ -0.64
SYNE2-228ENST00000639659 CA1P00915 261 aaPredicted RBP11.03□□□□□ -0.64
SYNE2-228ENST00000639659 FCGR2CP31995 323 aa11.03□□□□□ -0.64
SYNE2-228ENST00000639659 CATR1Q13166 79 aa11.03□□□□□ -0.64
SYNE2-228ENST00000639659 SSX1Q16384 188 aa11.03□□□□□ -0.64
SYNE2-228ENST00000639659 C22orf42Q6IC83 251 aa11.03□□□□□ -0.64
SYNE2-228ENST00000639659 GBGT1Q8N5D6 347 aa11.03□□□□□ -0.64
SYNE2-228ENST00000639659 GDPD1Q8N9F7 314 aa11.03□□□□□ -0.64
SYNE2-228ENST00000639659 RNF2Q99496 336 aa11.03□□□□□ -0.64
SYNE2-228ENST00000639659 SLC5A7Q9GZV3 580 aa11.03□□□□□ -0.64
SYNE2-228ENST00000639659 C21orf62Q9NYP8 219 aa11.03□□□□□ -0.64
SYNE2-228ENST00000639659 IGHV3OR16-13A0A075B7E8 117 aa11.02□□□□□ -0.65
SYNE2-228ENST00000639659 IGHV3-74A0A0B4J1X5 117 aa11.02□□□□□ -0.65
SYNE2-228ENST00000639659 SSX5O60225 188 aa11.02□□□□□ -0.65
SYNE2-228ENST00000639659 TRAPPC2P0DI81 140 aa11.02□□□□□ -0.65
SYNE2-228ENST00000639659 TRAPPC2BP0DI82 140 aa11.02□□□□□ -0.65
SYNE2-228ENST00000639659 NQO2P16083 231 aa11.02□□□□□ -0.65
SYNE2-228ENST00000639659 AQP4P55087 323 aa11.02□□□□□ -0.65
SYNE2-228ENST00000639659 TAS2R31P59538 309 aa11.02□□□□□ -0.65
SYNE2-228ENST00000639659 AADACL3Q5VUY0 350 aa11.02□□□□□ -0.65
SYNE2-228ENST00000639659 TMEM17Q86X19 198 aa11.02□□□□□ -0.65
SYNE2-228ENST00000639659 DUSP21Q9H596 190 aa11.02□□□□□ -0.65
SYNE2-228ENST00000639659 HPRT1P00492 218 aa11.01□□□□□ -0.65
SYNE2-228ENST00000639659 ERVK-16P61578 105 aa11.01□□□□□ -0.65
SYNE2-228ENST00000639659 WT1-ASQ06250 92 aa11.01□□□□□ -0.65
SYNE2-228ENST00000639659 SPSB3Q6PJ21 355 aa11.01□□□□□ -0.65
SYNE2-228ENST00000639659 ZNF367Q7RTV3 350 aa11.01□□□□□ -0.65
SYNE2-228ENST00000639659 PRSS48Q7RTY5 328 aa11.01□□□□□ -0.65
SYNE2-228ENST00000639659 NR2C2APQ86WQ0 139 aa11.01□□□□□ -0.65
SYNE2-228ENST00000639659 BEST4Q8NFU0 473 aa11.01□□□□□ -0.65
SYNE2-228ENST00000639659 SCARB1Q8WTV0 552 aa11.01□□□□□ -0.65
SYNE2-228ENST00000639659 CMTM3Q96MX0 182 aa11.01□□□□□ -0.65
SYNE2-228ENST00000639659 RHPN1-AS1Q9BWJ2 59 aa11.01□□□□□ -0.65
SYNE2-228ENST00000639659 C11orf68Q9H3H3 251 aaKnown RBP11.01□□□□□ -0.65
SYNE2-228ENST00000639659 PPYP01298 95 aa11□□□□□ -0.65
SYNE2-228ENST00000639659 SERPINE2P07093 398 aa11□□□□□ -0.65
SYNE2-228ENST00000639659 ADMP35318 185 aa11□□□□□ -0.65
SYNE2-228ENST00000639659 MFAP2P55001 183 aa11□□□□□ -0.65
SYNE2-228ENST00000639659 GVQW1Q8N7I0 195 aa11□□□□□ -0.65
SYNE2-228ENST00000639659 TMEM116Q8NCL8 245 aa11□□□□□ -0.65
SYNE2-228ENST00000639659 LGALS14Q8TCE9 139 aa11□□□□□ -0.65
SYNE2-228ENST00000639659 SRSF8Q9BRL6 282 aaKnown RBP11□□□□□ -0.65
SYNE2-228ENST00000639659 SMPXQ9UHP9 88 aa11□□□□□ -0.65
SYNE2-228ENST00000639659 DAPK2Q9UIK4 370 aa11□□□□□ -0.65
SYNE2-228ENST00000639659 NSG2Q9Y328 171 aa11□□□□□ -0.65
SYNE2-228ENST00000639659 VPS13DQ5THJ4 4388 aa11□□□□□ -0.65
SYNE2-228ENST00000639659 IGHV7-4-1A0A0J9YVY3 117 aa10.99□□□□□ -0.65
SYNE2-228ENST00000639659 TEX50A0A1B0GTY4 177 aa10.99□□□□□ -0.65
SYNE2-228ENST00000639659 C15orf62A8K5M9 175 aa10.99□□□□□ -0.65
SYNE2-228ENST00000639659 RBFOX2O43251 390 aaKnown RBP eCLIP10.99□□□□□ -0.65
SYNE2-228ENST00000639659 TMEM187Q14656 261 aa10.99□□□□□ -0.65
SYNE2-228ENST00000639659 LEMD1Q68G75 181 aa10.99□□□□□ -0.65
SYNE2-228ENST00000639659 OR1L8Q8NGR8 309 aa10.99□□□□□ -0.65
SYNE2-228ENST00000639659 LSM10Q969L4 123 aaKnown RBP10.99□□□□□ -0.65
SYNE2-228ENST00000639659 NDUFB11Q9NX14 153 aa10.99□□□□□ -0.65
SYNE2-228ENST00000639659 F11RQ9Y624 299 aaKnown RBP10.99□□□□□ -0.65
SYNE2-228ENST00000639659 TRDV1A0A1B0GX56 115 aa10.98□□□□□ -0.65
SYNE2-228ENST00000639659 K7EMT4 169 aa10.98□□□□□ -0.65
SYNE2-228ENST00000639659 CHEK1O14757 476 aa10.98□□□□□ -0.65
SYNE2-228ENST00000639659 NUPL2O15504 423 aaKnown RBP10.98□□□□□ -0.65
SYNE2-228ENST00000639659 MRPS14O60783 128 aaKnown RBP10.98□□□□□ -0.65
SYNE2-228ENST00000639659 SCGNO76038 276 aa10.98□□□□□ -0.65
SYNE2-228ENST00000639659 EIF4EP06730 217 aaKnown RBP10.98□□□□□ -0.65
SYNE2-228ENST00000639659 CMC4P56277 68 aaPredicted RBP10.98□□□□□ -0.65
SYNE2-228ENST00000639659 TBCEQ15813 527 aaPredicted RBP10.98□□□□□ -0.65
SYNE2-228ENST00000639659 THOC7Q6I9Y2 204 aaKnown RBP10.98□□□□□ -0.65
SYNE2-228ENST00000639659 ZNF773Q6PK81 442 aa10.98□□□□□ -0.65
SYNE2-228ENST00000639659 ZNF818PQ6ZRF7 136 aa10.98□□□□□ -0.65
SYNE2-228ENST00000639659 ZBTB34Q8NCN2 500 aa10.98□□□□□ -0.65
SYNE2-228ENST00000639659 GIMAP1Q8WWP7 306 aa10.98□□□□□ -0.65
SYNE2-228ENST00000639659 MISP3Q96FF7 219 aa10.98□□□□□ -0.65
SYNE2-228ENST00000639659 APLNQ9ULZ1 77 aa10.98□□□□□ -0.65
SYNE2-228ENST00000639659 RRP15Q9Y3B9 282 aaKnown RBP10.98□□□□□ -0.65
SYNE2-228ENST00000639659 OR51B2Q9Y5P1 312 aa10.98□□□□□ -0.65
SYNE2-228ENST00000639659 TRAV18A0A075B6X5 111 aa10.97□□□□□ -0.65
SYNE2-228ENST00000639659 IGHV3-66A0A0C4DH42 116 aa10.97□□□□□ -0.65
SYNE2-228ENST00000639659 NOTOA8MTQ0 251 aa10.97□□□□□ -0.65
SYNE2-228ENST00000639659 F8W735 103 aaPredicted RBP10.97□□□□□ -0.65
SYNE2-228ENST00000639659 K7EIM0 57 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms