RNA–Protein interactions for RNA: ENST00000637450.1

CLN6-220, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3

Gene CLN6, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-220ENST00000637450 XRCC3O43542 346 aa13.79□□□□□ -0.2
CLN6-220ENST00000637450 PLET1Q6UQ28 207 aa13.79□□□□□ -0.2
CLN6-220ENST00000637450 RBPMS2Q6ZRY4 209 aaKnown RBP13.79□□□□□ -0.2
CLN6-220ENST00000637450 VN1R17PQ8TDU5 208 aa13.79□□□□□ -0.2
CLN6-220ENST00000637450 BORCS5Q969J3 196 aa13.79□□□□□ -0.2
CLN6-220ENST00000637450 OVOL2Q9BRP0 275 aa13.79□□□□□ -0.2
CLN6-220ENST00000637450 COMMD9Q9P000 198 aa13.79□□□□□ -0.2
CLN6-220ENST00000637450 UFC1Q9Y3C8 167 aa13.79□□□□□ -0.2
CLN6-220ENST00000637450 LOC102724200A0A096LPH7 203 aaPredicted RBP13.78□□□□□ -0.2
CLN6-220ENST00000637450 SERPINE2P07093 398 aa13.78□□□□□ -0.2
CLN6-220ENST00000637450 TRAPPC2P0DI81 140 aa13.78□□□□□ -0.2
CLN6-220ENST00000637450 TRAPPC2BP0DI82 140 aa13.78□□□□□ -0.2
CLN6-220ENST00000637450 RPA2P15927 270 aa13.78□□□□□ -0.2
CLN6-220ENST00000637450 HERV-K104P61576 105 aa13.78□□□□□ -0.2
CLN6-220ENST00000637450 WT1-ASQ06250 92 aa13.78□□□□□ -0.2
CLN6-220ENST00000637450 NEDD8Q15843 81 aa13.78□□□□□ -0.2
CLN6-220ENST00000637450 THOC7Q6I9Y2 204 aaKnown RBP13.78□□□□□ -0.2
CLN6-220ENST00000637450 HSD17B13Q7Z5P4 300 aaPredicted RBP13.78□□□□□ -0.2
CLN6-220ENST00000637450 GDPD1Q8N9F7 314 aa13.78□□□□□ -0.2
CLN6-220ENST00000637450 S100A16Q96FQ6 103 aaKnown RBP13.78□□□□□ -0.2
CLN6-220ENST00000637450 CYB5BO43169 146 aa13.77□□□□□ -0.21
CLN6-220ENST00000637450 TGOLN2O43493 480 aa13.77□□□□□ -0.21
CLN6-220ENST00000637450 PGLYRP1O75594 196 aaPredicted RBP13.77□□□□□ -0.21
CLN6-220ENST00000637450 OR13C7P0DN81 318 aa13.77□□□□□ -0.21
CLN6-220ENST00000637450 RFX2P48378 723 aa13.77□□□□□ -0.21
CLN6-220ENST00000637450 OR1L6Q8NGR2 347 aa13.77□□□□□ -0.21
CLN6-220ENST00000637450 C5orf66Q9H5L9 145 aa13.77□□□□□ -0.21
CLN6-220ENST00000637450 IFT46Q9NQC8 304 aa13.77□□□□□ -0.21
CLN6-220ENST00000637450 NDUFA4L2Q9NRX3 87 aa13.77□□□□□ -0.21
CLN6-220ENST00000637450 EHFQ9NZC4 300 aa13.77□□□□□ -0.21
CLN6-220ENST00000637450 ANAPC10Q9UM13 185 aa13.77□□□□□ -0.21
CLN6-220ENST00000637450 MARCH11A6NNE9 402 aa13.76□□□□□ -0.21
CLN6-220ENST00000637450 F2RP25116 425 aa13.76□□□□□ -0.21
CLN6-220ENST00000637450 ERVK-16P61578 105 aa13.76□□□□□ -0.21
CLN6-220ENST00000637450 SLC25A24Q6NUK1 477 aa13.76□□□□□ -0.21
CLN6-220ENST00000637450 CROCCP3Q8IVE0 287 aa13.76□□□□□ -0.21
CLN6-220ENST00000637450 CADM3Q8N126 398 aa13.76□□□□□ -0.21
CLN6-220ENST00000637450 OR2C3Q8N628 320 aa13.76□□□□□ -0.21
CLN6-220ENST00000637450 OR1L8Q8NGR8 309 aa13.76□□□□□ -0.21
CLN6-220ENST00000637450 TMEM190Q8WZ59 177 aa13.76□□□□□ -0.21
CLN6-220ENST00000637450 MOB3AQ96BX8 217 aa13.76□□□□□ -0.21
CLN6-220ENST00000637450 ZNF2Q9BSG1 426 aaPredicted RBP13.76□□□□□ -0.21
CLN6-220ENST00000637450 OR2T8A6NH00 312 aa13.75□□□□□ -0.21
CLN6-220ENST00000637450 PMP2P02689 132 aa13.75□□□□□ -0.21
CLN6-220ENST00000637450 RLN1P04808 185 aa13.75□□□□□ -0.21
CLN6-220ENST00000637450 NAT1P18440 290 aa13.75□□□□□ -0.21
CLN6-220ENST00000637450 TGFBR1P36897 503 aa13.75□□□□□ -0.21
CLN6-220ENST00000637450 LPAR6P43657 344 aa13.75□□□□□ -0.21
CLN6-220ENST00000637450 MFAP2P55001 183 aa13.75□□□□□ -0.21
CLN6-220ENST00000637450 SLC38A6Q8IZM9 456 aa13.75□□□□□ -0.21
CLN6-220ENST00000637450 BSCL2Q96G97 398 aaPredicted RBP13.75□□□□□ -0.21
CLN6-220ENST00000637450 ATP6V0BQ99437 205 aa13.75□□□□□ -0.21
CLN6-220ENST00000637450 SPAG8Q99932 426 aaPredicted RBP13.75□□□□□ -0.21
CLN6-220ENST00000637450 TSPAN4O14817 238 aa13.74□□□□□ -0.21
CLN6-220ENST00000637450 RPS19P39019 145 aaKnown RBP13.74□□□□□ -0.21
CLN6-220ENST00000637450 UBE2NLQ5JXB2 153 aa13.74□□□□□ -0.21
CLN6-220ENST00000637450 SPSB3Q6PJ21 355 aa13.74□□□□□ -0.21
CLN6-220ENST00000637450 FCAMRQ8WWV6 532 aa13.74□□□□□ -0.21
CLN6-220ENST00000637450 LSM10Q969L4 123 aaKnown RBP13.74□□□□□ -0.21
CLN6-220ENST00000637450 DGCR14Q96DF8 476 aaKnown RBP13.74□□□□□ -0.21
CLN6-220ENST00000637450 DAZ1Q9NQZ3 744 aaKnown RBP13.74□□□□□ -0.21
CLN6-220ENST00000637450 NSG2Q9Y328 171 aa13.74□□□□□ -0.21
CLN6-220ENST00000637450 OR51B2Q9Y5P1 312 aa13.74□□□□□ -0.21
CLN6-220ENST00000637450 F11RQ9Y624 299 aaKnown RBP13.74□□□□□ -0.21
CLN6-220ENST00000637450 IGHV3-21A0A0B4J1V1 117 aa13.73□□□□□ -0.21
CLN6-220ENST00000637450 NDUFA4O00483 81 aa13.73□□□□□ -0.21
CLN6-220ENST00000637450 KRASP01116 189 aa13.73□□□□□ -0.21
CLN6-220ENST00000637450 TAS2R20P59543 309 aa13.73□□□□□ -0.21
CLN6-220ENST00000637450 KCTD21Q4G0X4 260 aa13.73□□□□□ -0.21
CLN6-220ENST00000637450 TMEM69Q5SWH9 247 aa13.73□□□□□ -0.21
CLN6-220ENST00000637450 WFDC3Q8IUB2 231 aa13.73□□□□□ -0.21
CLN6-220ENST00000637450 CMTM1Q8IZ96 169 aa13.73□□□□□ -0.21
CLN6-220ENST00000637450 SCARB1Q8WTV0 552 aa13.73□□□□□ -0.21
CLN6-220ENST00000637450 CHRDL1Q9BU40 450 aa13.73□□□□□ -0.21
CLN6-220ENST00000637450 HINT2Q9BX68 163 aa13.73□□□□□ -0.21
CLN6-220ENST00000637450 C21orf62Q9NYP8 219 aa13.73□□□□□ -0.21
CLN6-220ENST00000637450 F8W735 103 aaPredicted RBP13.72□□□□□ -0.21
CLN6-220ENST00000637450 SNAPC5O75971 98 aa13.72□□□□□ -0.21
CLN6-220ENST00000637450 G6PCP35575 357 aa13.72□□□□□ -0.21
CLN6-220ENST00000637450 TAS2R46P59540 309 aa13.72□□□□□ -0.21
CLN6-220ENST00000637450 LAMTOR1Q6IAA8 161 aa13.72□□□□□ -0.21
CLN6-220ENST00000637450 LYSMD2Q8IV50 215 aa13.72□□□□□ -0.21
CLN6-220ENST00000637450 SAMD12Q8N8I0 201 aa13.72□□□□□ -0.21
CLN6-220ENST00000637450 OR5H2Q8NGV7 314 aa13.72□□□□□ -0.21
CLN6-220ENST00000637450 OR6F1Q8NGZ6 308 aa13.72□□□□□ -0.21
CLN6-220ENST00000637450 TP53TG1Q9Y2A0 90 aa13.72□□□□□ -0.21
CLN6-220ENST00000637450 K7EIM0 57 aa13.71□□□□□ -0.21
CLN6-220ENST00000637450 K7EMT4 169 aa13.71□□□□□ -0.21
CLN6-220ENST00000637450 GPR31O00270 319 aa13.71□□□□□ -0.21
CLN6-220ENST00000637450 PRSS3P35030 304 aa13.71□□□□□ -0.21
CLN6-220ENST00000637450 ADMP35318 185 aa13.71□□□□□ -0.21
CLN6-220ENST00000637450 APOC4P55056 127 aa13.71□□□□□ -0.21
CLN6-220ENST00000637450 Q6ZWC4 215 aa13.71□□□□□ -0.21
CLN6-220ENST00000637450 OR5B3Q8NH48 314 aa13.71□□□□□ -0.21
CLN6-220ENST00000637450 FXYD6Q9H0Q3 95 aa13.71□□□□□ -0.21
CLN6-220ENST00000637450 UBQLN2Q9UHD9 624 aa13.71□□□□□ -0.21
CLN6-220ENST00000637450 PRNDQ9UKY0 176 aa13.71□□□□□ -0.21
CLN6-220ENST00000637450 ODF3L2Q3SX64 289 aa13.7□□□□□ -0.22
CLN6-220ENST00000637450 TSPAN14Q8NG11 270 aa13.7□□□□□ -0.22
CLN6-220ENST00000637450 YIPF6Q96EC8 236 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms