RNA–Protein interactions for RNA: ENST00000636898.1

CHRNA7-221, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 2,057 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-221ENST00000636898 RTL8BQ17RB0 113 aa13.16□□□□□ -0.3
CHRNA7-221ENST00000636898 TEX36Q5VZQ5 186 aa13.16□□□□□ -0.3
CHRNA7-221ENST00000636898 DUX4L9Q6RFH8 374 aaPredicted RBP13.16□□□□□ -0.3
CHRNA7-221ENST00000636898 ASPMQ8IZT6 3477 aa13.16□□□□□ -0.3
CHRNA7-221ENST00000636898 SGMS2Q8NHU3 365 aa13.16□□□□□ -0.3
CHRNA7-221ENST00000636898 PLEKHA3Q9HB20 300 aa13.16□□□□□ -0.3
CHRNA7-221ENST00000636898 ELOVL5Q9NYP7 299 aa13.16□□□□□ -0.3
CHRNA7-221ENST00000636898 SLC25A10Q9UBX3 287 aaPredicted RBP13.16□□□□□ -0.3
CHRNA7-221ENST00000636898 CFAP47Q6ZTR5 3102 aa13.16□□□□□ -0.3
CHRNA7-221ENST00000636898 PGPEP1LA6NFU8 196 aa13.16□□□□□ -0.3
CHRNA7-221ENST00000636898 C9JCJ5 164 aa13.16□□□□□ -0.3
CHRNA7-221ENST00000636898 J3QR06 171 aa13.16□□□□□ -0.3
CHRNA7-221ENST00000636898 UPK2O00526 184 aa13.16□□□□□ -0.3
CHRNA7-221ENST00000636898 DDTP30046 118 aa13.16□□□□□ -0.3
CHRNA7-221ENST00000636898 CEACAM8P31997 349 aaPredicted RBP13.16□□□□□ -0.3
CHRNA7-221ENST00000636898 CCKARP32238 428 aa13.16□□□□□ -0.3
CHRNA7-221ENST00000636898 GPX4P36969 197 aaPredicted RBP13.16□□□□□ -0.3
CHRNA7-221ENST00000636898 TEX38Q6PEX7 206 aa13.16□□□□□ -0.3
CHRNA7-221ENST00000636898 TP53TG5Q9Y2B4 290 aa13.16□□□□□ -0.3
CHRNA7-221ENST00000636898 TRAPPC1Q9Y5R8 145 aa13.16□□□□□ -0.3
CHRNA7-221ENST00000636898 RAI1Q7Z5J4 1906 aaPredicted RBP13.15□□□□□ -0.3
CHRNA7-221ENST00000636898 CRYABP02511 175 aaKnown RBP13.15□□□□□ -0.3
CHRNA7-221ENST00000636898 RPL31P62899 125 aaKnown RBP13.15□□□□□ -0.3
CHRNA7-221ENST00000636898 NUP37Q8NFH4 326 aa13.15□□□□□ -0.3
CHRNA7-221ENST00000636898 OR10G8Q8NGN5 311 aa13.15□□□□□ -0.3
CHRNA7-221ENST00000636898 OCC1Q8TAD7 63 aa13.15□□□□□ -0.3
CHRNA7-221ENST00000636898 UHRF2Q96PU4 802 aa13.15□□□□□ -0.3
CHRNA7-221ENST00000636898 CCL13Q99616 98 aa13.15□□□□□ -0.3
CHRNA7-221ENST00000636898 FKBP11Q9NYL4 201 aa13.15□□□□□ -0.3
CHRNA7-221ENST00000636898 MKRN2OSH3BPM6 223 aa13.14□□□□□ -0.31
CHRNA7-221ENST00000636898 LINC00869P0C866 280 aa13.14□□□□□ -0.31
CHRNA7-221ENST00000636898 CT45A6P0DMU7 189 aa13.14□□□□□ -0.31
CHRNA7-221ENST00000636898 CT45A5P0DMU8 189 aa13.14□□□□□ -0.31
CHRNA7-221ENST00000636898 CT45A7P0DMV0 189 aa13.14□□□□□ -0.31
CHRNA7-221ENST00000636898 IRF2P14316 349 aa13.14□□□□□ -0.31
CHRNA7-221ENST00000636898 IGFBP2P18065 325 aa13.14□□□□□ -0.31
CHRNA7-221ENST00000636898 CD40P25942 277 aa13.14□□□□□ -0.31
CHRNA7-221ENST00000636898 SPATA31B1PQ5VZV4 182 aa13.14□□□□□ -0.31
CHRNA7-221ENST00000636898 C14orf144Q96I85 54 aa13.14□□□□□ -0.31
CHRNA7-221ENST00000636898 SLC45A2Q9UMX9 530 aa13.14□□□□□ -0.31
CHRNA7-221ENST00000636898 hADV38S2A0JD32 116 aa13.14□□□□□ -0.31
CHRNA7-221ENST00000636898 A8MXE2 369 aa13.14□□□□□ -0.31
CHRNA7-221ENST00000636898 GNG10P50151 68 aa13.14□□□□□ -0.31
CHRNA7-221ENST00000636898 YPEL3P61236 119 aaPredicted RBP13.14□□□□□ -0.31
CHRNA7-221ENST00000636898 LINC00469Q8N7U9 141 aa13.14□□□□□ -0.31
CHRNA7-221ENST00000636898 DEFB108BQ8NET1 73 aa13.14□□□□□ -0.31
CHRNA7-221ENST00000636898 SLC35E1Q96K37 410 aa13.14□□□□□ -0.31
CHRNA7-221ENST00000636898 SLC35D1Q9NTN3 355 aa13.14□□□□□ -0.31
CHRNA7-221ENST00000636898 BET1LQ9NYM9 111 aa13.14□□□□□ -0.31
CHRNA7-221ENST00000636898 LINC00312Q9Y6C7 94 aa13.14□□□□□ -0.31
CHRNA7-221ENST00000636898 C2orf83Q53S99 150 aa13.13□□□□□ -0.31
CHRNA7-221ENST00000636898 REC114Q7Z4M0 266 aa13.13□□□□□ -0.31
CHRNA7-221ENST00000636898 PNKDQ8N490 385 aa13.13□□□□□ -0.31
CHRNA7-221ENST00000636898 GBGT1Q8N5D6 347 aa13.13□□□□□ -0.31
CHRNA7-221ENST00000636898 FAM216BQ8N7L0 139 aa13.13□□□□□ -0.31
CHRNA7-221ENST00000636898 OR4P4Q8NGL7 312 aa13.13□□□□□ -0.31
CHRNA7-221ENST00000636898 OR5B3Q8NH48 314 aa13.13□□□□□ -0.31
CHRNA7-221ENST00000636898 C19orf24Q9BVV8 132 aa13.13□□□□□ -0.31
CHRNA7-221ENST00000636898 HINT2Q9BX68 163 aa13.13□□□□□ -0.31
CHRNA7-221ENST00000636898 TMEM167BQ9NRX6 74 aa13.13□□□□□ -0.31
CHRNA7-221ENST00000636898 MMP23AO75900 390 aa13.12□□□□□ -0.31
CHRNA7-221ENST00000636898 IGKV1-16P04430 117 aa13.12□□□□□ -0.31
CHRNA7-221ENST00000636898 ZNF833PQ6ZTB9 187 aa13.12□□□□□ -0.31
CHRNA7-221ENST00000636898 A0A087X0M5 115 aa13.12□□□□□ -0.31
CHRNA7-221ENST00000636898 A0A1B0GX30 115 aa13.12□□□□□ -0.31
CHRNA7-221ENST00000636898 FOXH1O75593 365 aa13.12□□□□□ -0.31
CHRNA7-221ENST00000636898 MYOD1P15172 320 aa13.12□□□□□ -0.31
CHRNA7-221ENST00000636898 FAM27E3Q08E93 113 aa13.12□□□□□ -0.31
CHRNA7-221ENST00000636898 PRSS8Q16651 343 aa13.12□□□□□ -0.31
CHRNA7-221ENST00000636898 KRTCAP3Q53RY4 240 aa13.12□□□□□ -0.31
CHRNA7-221ENST00000636898 OR1L8Q8NGR8 309 aa13.12□□□□□ -0.31
CHRNA7-221ENST00000636898 NOL4LQ96MY1 436 aaPredicted RBP13.12□□□□□ -0.31
CHRNA7-221ENST00000636898 IL36BQ9NZH7 164 aa13.12□□□□□ -0.31
CHRNA7-221ENST00000636898 PLCE1Q9P212 2302 aa13.12□□□□□ -0.31
CHRNA7-221ENST00000636898 DYSFO75923 2080 aa13.12□□□□□ -0.31
CHRNA7-221ENST00000636898 TEX50A0A1B0GTY4 177 aa13.11□□□□□ -0.31
CHRNA7-221ENST00000636898 SRRM4A7MD48 611 aaKnown RBP13.11□□□□□ -0.31
CHRNA7-221ENST00000636898 MEF2CQ06413 473 aaPredicted RBP13.11□□□□□ -0.31
CHRNA7-221ENST00000636898 OSR1Q8TAX0 266 aaPredicted RBP13.11□□□□□ -0.31
CHRNA7-221ENST00000636898 FAM57AQ8TBR7 257 aa13.11□□□□□ -0.31
CHRNA7-221ENST00000636898 NABP2Q9BQ15 211 aa13.11□□□□□ -0.31
CHRNA7-221ENST00000636898 LRFN3Q9BTN0 628 aa13.11□□□□□ -0.31
CHRNA7-221ENST00000636898 GAL3ST2Q9H3Q3 398 aa13.11□□□□□ -0.31
CHRNA7-221ENST00000636898 EP300Q09472 2414 aaPredicted RBP13.11□□□□□ -0.31
CHRNA7-221ENST00000636898 NKX6-3A6NJ46 265 aa13.11□□□□□ -0.31
CHRNA7-221ENST00000636898 K7EN84 100 aa13.11□□□□□ -0.31
CHRNA7-221ENST00000636898 TNFRSF1AP19438 455 aa13.11□□□□□ -0.31
CHRNA7-221ENST00000636898 PQLC2Q6ZP29 291 aa13.11□□□□□ -0.31
CHRNA7-221ENST00000636898 C22orf34Q6ZV56 151 aa13.11□□□□□ -0.31
CHRNA7-221ENST00000636898 MIR17HGQ75NE6 70 aa13.11□□□□□ -0.31
CHRNA7-221ENST00000636898 EAF1Q96JC9 268 aaPredicted RBP13.11□□□□□ -0.31
CHRNA7-221ENST00000636898 PRO1933Q9H354 126 aa13.11□□□□□ -0.31
CHRNA7-221ENST00000636898 TECRQ9NZ01 308 aaKnown RBP13.11□□□□□ -0.31
CHRNA7-221ENST00000636898 TMEM108Q6UXF1 575 aa13.1□□□□□ -0.31
CHRNA7-221ENST00000636898 RBMXL3Q8N7X1 1067 aaKnown RBP13.1□□□□□ -0.31
CHRNA7-221ENST00000636898 IGKV1OR2-108A0A075B7D4 117 aa13.09□□□□□ -0.31
CHRNA7-221ENST00000636898 INS-IGF2F8WCM5 200 aa13.09□□□□□ -0.31
CHRNA7-221ENST00000636898 OR4A8P0C604 315 aa13.09□□□□□ -0.31
CHRNA7-221ENST00000636898 SAA1P0DJI8 122 aaPredicted RBP13.09□□□□□ -0.31
CHRNA7-221ENST00000636898 SELENOTP62341 195 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms