RNA–Protein interactions for RNA: ENST00000636602.1

CLN5-212, Transcript of CLN5, intracellular trafficking protein, humanhuman

TSL 3

Gene CLN5, Length 661 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-212ENST00000636602 LSM5Q9Y4Y9 91 aaKnown RBP2.16□□□□□ -2.06
CLN5-212ENST00000636602 ARFGEF1Q9Y6D6 1849 aa2.16□□□□□ -2.06
CLN5-212ENST00000636602 DDX60Q8IY21 1712 aaKnown RBP2.16□□□□□ -2.06
CLN5-212ENST00000636602 ANKRD31Q8N7Z5 1873 aa2.16□□□□□ -2.06
CLN5-212ENST00000636602 SPEF2Q9C093 1822 aa2.15□□□□□ -2.06
CLN5-212ENST00000636602 IBTKQ9P2D0 1353 aaPredicted RBP2.15□□□□□ -2.07
CLN5-212ENST00000636602 KIAA1551Q9HCM1 1747 aa2.15□□□□□ -2.07
CLN5-212ENST00000636602 GRIFINA4D1Z8 144 aa2.15□□□□□ -2.07
CLN5-212ENST00000636602 OR6C6A6NF89 314 aa2.15□□□□□ -2.07
CLN5-212ENST00000636602 DISC1C4P0D8 188 aa2.15□□□□□ -2.07
CLN5-212ENST00000636602 HIST1H1EP10412 219 aaKnown RBP2.15□□□□□ -2.07
CLN5-212ENST00000636602 CRHBPP24387 322 aa2.15□□□□□ -2.07
CLN5-212ENST00000636602 MAP2K4P45985 399 aa2.15□□□□□ -2.07
CLN5-212ENST00000636602 HOXC5Q00444 222 aa2.15□□□□□ -2.07
CLN5-212ENST00000636602 PLPPR5Q32ZL2 321 aa2.15□□□□□ -2.07
CLN5-212ENST00000636602 TMEM176BQ3YBM2 270 aaPredicted RBP2.15□□□□□ -2.07
CLN5-212ENST00000636602 HCP5Q6MZN7 132 aa2.15□□□□□ -2.07
CLN5-212ENST00000636602 ZNF322Q6U7Q0 402 aaPredicted RBP2.15□□□□□ -2.07
CLN5-212ENST00000636602 DAND5Q8N907 189 aa2.15□□□□□ -2.07
CLN5-212ENST00000636602 RPS4Y2Q8TD47 263 aa2.15□□□□□ -2.07
CLN5-212ENST00000636602 ITFG2Q969R8 447 aa2.15□□□□□ -2.07
CLN5-212ENST00000636602 CCL13Q99616 98 aa2.15□□□□□ -2.07
CLN5-212ENST00000636602 PXMP4Q9Y6I8 212 aa2.15□□□□□ -2.07
CLN5-212ENST00000636602 RIC1Q4ADV7 1423 aa2.15□□□□□ -2.07
CLN5-212ENST00000636602 GOLGB1Q14789 3259 aaKnown RBP2.15□□□□□ -2.07
CLN5-212ENST00000636602 ZSWIM8A7E2V4 1837 aa2.14□□□□□ -2.07
CLN5-212ENST00000636602 LRRC37AA6NMS7 1700 aa2.14□□□□□ -2.07
CLN5-212ENST00000636602 A0A1B0GUL6 1792 aa2.14□□□□□ -2.07
CLN5-212ENST00000636602 UTRNP46939 3433 aa2.14□□□□□ -2.07
CLN5-212ENST00000636602 TGIF2-C20orf24A0A0A6YYL0 155 aa2.14□□□□□ -2.07
CLN5-212ENST00000636602 SDHAF1A6NFY7 115 aa2.14□□□□□ -2.07
CLN5-212ENST00000636602 C17orf51A8MQB3 221 aa2.14□□□□□ -2.07
CLN5-212ENST00000636602 OR11H12B2RN74 326 aa2.14□□□□□ -2.07
CLN5-212ENST00000636602 UBFD1O14562 309 aaKnown RBP2.14□□□□□ -2.07
CLN5-212ENST00000636602 APOMO95445 188 aa2.14□□□□□ -2.07
CLN5-212ENST00000636602 IFNA16P05015 189 aa2.14□□□□□ -2.07
CLN5-212ENST00000636602 CCL3P10147 92 aa2.14□□□□□ -2.07
CLN5-212ENST00000636602 CDKN2CP42773 168 aa2.14□□□□□ -2.07
CLN5-212ENST00000636602 HIST2H3PS2Q5TEC6 136 aa2.14□□□□□ -2.07
CLN5-212ENST00000636602 SFXN4Q6P4A7 337 aa2.14□□□□□ -2.07
CLN5-212ENST00000636602 C5orf46Q6UWT4 87 aa2.14□□□□□ -2.07
CLN5-212ENST00000636602 ZNF550Q7Z398 422 aa2.14□□□□□ -2.07
CLN5-212ENST00000636602 PACRGLQ8N7B6 248 aa2.14□□□□□ -2.07
CLN5-212ENST00000636602 OR1M1Q8NGA1 313 aa2.14□□□□□ -2.07
CLN5-212ENST00000636602 OR51D1Q8NGF3 324 aa2.14□□□□□ -2.07
CLN5-212ENST00000636602 OR11H2Q8NH07 326 aa2.14□□□□□ -2.07
CLN5-212ENST00000636602 RAB2BQ8WUD1 216 aa2.14□□□□□ -2.07
CLN5-212ENST00000636602 GNPNAT1Q96EK6 184 aaPredicted RBP2.14□□□□□ -2.07
CLN5-212ENST00000636602 C8orf76Q96K31 380 aa2.14□□□□□ -2.07
CLN5-212ENST00000636602 CXorf21Q9HAI6 301 aa2.14□□□□□ -2.07
CLN5-212ENST00000636602 TXNL4BQ9NX01 149 aaKnown RBP2.14□□□□□ -2.07
CLN5-212ENST00000636602 ANAPC10Q9UM13 185 aa2.14□□□□□ -2.07
CLN5-212ENST00000636602 MINOS1-NBL1R4GNA1 71 aa2.14□□□□□ -2.07
CLN5-212ENST00000636602 LCTP09848 1927 aa2.14□□□□□ -2.07
CLN5-212ENST00000636602 MYH13Q9UKX3 1938 aa2.14□□□□□ -2.07
CLN5-212ENST00000636602 DICER1Q9UPY3 1922 aaKnown RBP2.14□□□□□ -2.07
CLN5-212ENST00000636602 TNRC6CQ9HCJ0 1690 aaKnown RBP2.14□□□□□ -2.07
CLN5-212ENST00000636602 FER1L6Q2WGJ9 1857 aa2.14□□□□□ -2.07
CLN5-212ENST00000636602 CCDC88AQ3V6T2 1871 aa2.14□□□□□ -2.07
CLN5-212ENST00000636602 ADAMTSL1Q8N6G6 1762 aa2.13□□□□□ -2.07
CLN5-212ENST00000636602 PSME4Q14997 1843 aa2.13□□□□□ -2.07
CLN5-212ENST00000636602 ZNF73O43830 326 aaPredicted RBP2.13□□□□□ -2.07
CLN5-212ENST00000636602 RPP14O95059 124 aaKnown RBP2.13□□□□□ -2.07
CLN5-212ENST00000636602 IGHV1-69P01742 117 aa2.13□□□□□ -2.07
CLN5-212ENST00000636602 CCL1P22362 96 aa2.13□□□□□ -2.07
CLN5-212ENST00000636602 RAB5BP61020 215 aa2.13□□□□□ -2.07
CLN5-212ENST00000636602 TBPL1P62380 186 aa2.13□□□□□ -2.07
CLN5-212ENST00000636602 GNA12Q03113 381 aa2.13□□□□□ -2.07
CLN5-212ENST00000636602 HIST3H3Q16695 136 aa2.13□□□□□ -2.07
CLN5-212ENST00000636602 TRAPPC5Q8IUR0 188 aa2.13□□□□□ -2.07
CLN5-212ENST00000636602 CNEP1R1Q8N9A8 125 aa2.13□□□□□ -2.07
CLN5-212ENST00000636602 SFRP2Q96HF1 295 aa2.13□□□□□ -2.07
CLN5-212ENST00000636602 OR51V1Q9H2C8 321 aa2.13□□□□□ -2.07
CLN5-212ENST00000636602 C10orf71Q711Q0 1435 aa2.13□□□□□ -2.07
CLN5-212ENST00000636602 ARAP2Q8WZ64 1704 aa2.13□□□□□ -2.07
CLN5-212ENST00000636602 OTOFQ9HC10 1997 aa2.12□□□□□ -2.07
CLN5-212ENST00000636602 SBF1O95248 1867 aa2.12□□□□□ -2.07
CLN5-212ENST00000636602 TIAM2Q8IVF5 1701 aa2.12□□□□□ -2.07
CLN5-212ENST00000636602 COX7A2LO14548 114 aa2.12□□□□□ -2.07
CLN5-212ENST00000636602 FAM228BP0C875 321 aa2.12□□□□□ -2.07
CLN5-212ENST00000636602 GZMBP10144 247 aa2.12□□□□□ -2.07
CLN5-212ENST00000636602 SLCO1A2P46721 670 aa2.12□□□□□ -2.07
CLN5-212ENST00000636602 GABRA2P47869 451 aa2.12□□□□□ -2.07
CLN5-212ENST00000636602 MARCKSL1P49006 195 aa2.12□□□□□ -2.07
CLN5-212ENST00000636602 RAP1GDS1P52306 607 aa2.12□□□□□ -2.07
CLN5-212ENST00000636602 FABP9Q0Z7S8 132 aa2.12□□□□□ -2.07
CLN5-212ENST00000636602 OR2F1Q13607 317 aa2.12□□□□□ -2.07
CLN5-212ENST00000636602 SPATA12Q7Z6I5 190 aa2.12□□□□□ -2.07
CLN5-212ENST00000636602 UMODL1-AS1Q8N2C9 162 aa2.12□□□□□ -2.07
CLN5-212ENST00000636602 IMP4Q96G21 291 aaKnown RBP2.12□□□□□ -2.07
CLN5-212ENST00000636602 C20orf166-AS1Q96NR2 134 aa2.12□□□□□ -2.07
CLN5-212ENST00000636602 NMNAT3Q96T66 252 aa2.12□□□□□ -2.07
CLN5-212ENST00000636602 FAM96AQ9H5X1 160 aa2.12□□□□□ -2.07
CLN5-212ENST00000636602 COQ4Q9Y3A0 265 aa2.12□□□□□ -2.07
CLN5-212ENST00000636602 MMACHCQ9Y4U1 282 aa2.12□□□□□ -2.07
CLN5-212ENST00000636602 SRCAPQ6ZRS2 3230 aa2.12□□□□□ -2.07
CLN5-212ENST00000636602 PLXNB1O43157 2135 aa2.12□□□□□ -2.07
CLN5-212ENST00000636602 SLX4Q8IY92 1834 aa2.12□□□□□ -2.07
CLN5-212ENST00000636602 RTL9Q8NET4 1388 aa2.11□□□□□ -2.07
CLN5-212ENST00000636602 CHD5Q8TDI0 1954 aa2.11□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms