RNA–Protein interactions for RNA: ENST00000636466.1

GABRB3-219, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 4,509 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-219ENST00000636466 CDKN1AP38936 164 aa11.93□□□□□ -0.5
GABRB3-219ENST00000636466 NPCDR1Q9BY65 106 aa11.93□□□□□ -0.5
GABRB3-219ENST00000636466 ISLRO14498 428 aa11.92□□□□□ -0.5
GABRB3-219ENST00000636466 CGAP01215 116 aa11.92□□□□□ -0.5
GABRB3-219ENST00000636466 IL4P05112 153 aa11.92□□□□□ -0.5
GABRB3-219ENST00000636466 CCL1P22362 96 aa11.92□□□□□ -0.5
GABRB3-219ENST00000636466 DGAT2L7PQ6IED9 249 aa11.92□□□□□ -0.5
GABRB3-219ENST00000636466 PGLYRP4Q96LB8 373 aa11.92□□□□□ -0.5
GABRB3-219ENST00000636466 MRPL20Q9BYC9 149 aaKnown RBP11.92□□□□□ -0.5
GABRB3-219ENST00000636466 RAXQ9Y2V3 346 aa11.92□□□□□ -0.5
GABRB3-219ENST00000636466 IGKV3D-15A0A087WSY6 115 aa11.92□□□□□ -0.5
GABRB3-219ENST00000636466 TRBV6-7A0A0A0MS04 114 aa11.92□□□□□ -0.5
GABRB3-219ENST00000636466 IGKV3-15P01624 115 aa11.92□□□□□ -0.5
GABRB3-219ENST00000636466 NRN1LQ496H8 165 aa11.92□□□□□ -0.5
GABRB3-219ENST00000636466 TMEM177Q53S58 311 aa11.92□□□□□ -0.5
GABRB3-219ENST00000636466 TMEM186Q96B77 213 aa11.92□□□□□ -0.5
GABRB3-219ENST00000636466 IGHV3-66A0A0C4DH42 116 aa11.92□□□□□ -0.5
GABRB3-219ENST00000636466 MUC21A0A0G2JKD1 596 aa11.92□□□□□ -0.5
GABRB3-219ENST00000636466 MUC21A0A140T8X8 626 aa11.92□□□□□ -0.5
GABRB3-219ENST00000636466 B9A039 149 aa11.92□□□□□ -0.5
GABRB3-219ENST00000636466 FHL1Q13642 323 aa11.92□□□□□ -0.5
GABRB3-219ENST00000636466 MUC21Q5SSG8 566 aa11.92□□□□□ -0.5
GABRB3-219ENST00000636466 GOLT1AQ6ZVE7 132 aa11.92□□□□□ -0.5
GABRB3-219ENST00000636466 FAM57AQ8TBR7 257 aa11.92□□□□□ -0.5
GABRB3-219ENST00000636466 RFNGQ9Y644 331 aa11.92□□□□□ -0.5
GABRB3-219ENST00000636466 KBTBD11-OT1A0A1B0GTJ5 212 aa11.92□□□□□ -0.5
GABRB3-219ENST00000636466 IQCF6A8MYZ5 107 aa11.92□□□□□ -0.5
GABRB3-219ENST00000636466 SLC17A3O00476 420 aa11.92□□□□□ -0.5
GABRB3-219ENST00000636466 RPL7P18124 248 aaKnown RBP11.92□□□□□ -0.5
GABRB3-219ENST00000636466 TMEM191AQ9H0A3 160 aa11.92□□□□□ -0.5
GABRB3-219ENST00000636466 OR51M1Q9H341 326 aa11.92□□□□□ -0.5
GABRB3-219ENST00000636466 SEMA5BQ9P283 1151 aa11.92□□□□□ -0.5
GABRB3-219ENST00000636466 PLXND1Q9Y4D7 1925 aa11.91□□□□□ -0.5
GABRB3-219ENST00000636466 C17orf100A8MU93 164 aa11.91□□□□□ -0.5
GABRB3-219ENST00000636466 DIRC3C9JPN6 131 aa11.91□□□□□ -0.5
GABRB3-219ENST00000636466 TRGC1P0CF51 173 aa11.91□□□□□ -0.5
GABRB3-219ENST00000636466 ZCCHC14Q8WYQ9 949 aaKnown RBP11.91□□□□□ -0.5
GABRB3-219ENST00000636466 PLSCR2Q9NRY7 297 aa11.91□□□□□ -0.5
GABRB3-219ENST00000636466 MED13Q9UHV7 2174 aa11.91□□□□□ -0.5
GABRB3-219ENST00000636466 PSPNO60542 156 aa11.91□□□□□ -0.5
GABRB3-219ENST00000636466 IL6RP08887 468 aaPredicted RBP11.91□□□□□ -0.5
GABRB3-219ENST00000636466 CBLN1P23435 193 aa11.91□□□□□ -0.5
GABRB3-219ENST00000636466 GCHFRP30047 84 aa11.91□□□□□ -0.5
GABRB3-219ENST00000636466 C16orf92Q96LL3 132 aa11.91□□□□□ -0.5
GABRB3-219ENST00000636466 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.91□□□□□ -0.5
GABRB3-219ENST00000636466 OR2T8A6NH00 312 aa11.91□□□□□ -0.5
GABRB3-219ENST00000636466 CBY3A6NI87 242 aa11.91□□□□□ -0.5
GABRB3-219ENST00000636466 ATP5G3P48201 142 aa11.91□□□□□ -0.5
GABRB3-219ENST00000636466 RELBQ01201 579 aa11.91□□□□□ -0.5
GABRB3-219ENST00000636466 LY6DQ14210 128 aa11.91□□□□□ -0.5
GABRB3-219ENST00000636466 SRSF12Q8WXF0 261 aaKnown RBP11.91□□□□□ -0.5
GABRB3-219ENST00000636466 FBLN5Q9UBX5 448 aa11.91□□□□□ -0.5
GABRB3-219ENST00000636466 YLPM1P49750 1951 aaKnown RBP11.91□□□□□ -0.5
GABRB3-219ENST00000636466 CORTO00230 105 aa11.9□□□□□ -0.5
GABRB3-219ENST00000636466 FOXA3P55318 350 aaPredicted RBP11.9□□□□□ -0.5
GABRB3-219ENST00000636466 ABCA2Q9BZC7 2435 aa11.9□□□□□ -0.5
GABRB3-219ENST00000636466 LINC00205P59089 165 aa11.9□□□□□ -0.5
GABRB3-219ENST00000636466 SUPT4H1P63272 117 aaKnown RBP11.9□□□□□ -0.5
GABRB3-219ENST00000636466 KLRB1Q12918 225 aa11.9□□□□□ -0.5
GABRB3-219ENST00000636466 ZNF841Q6ZN19 808 aa11.9□□□□□ -0.5
GABRB3-219ENST00000636466 OR4C5Q8NGB2 326 aa11.9□□□□□ -0.5
GABRB3-219ENST00000636466 CEP295Q9C0D2 2601 aa11.9□□□□□ -0.5
GABRB3-219ENST00000636466 A8MXK9 166 aa11.9□□□□□ -0.5
GABRB3-219ENST00000636466 IL18BPO95998 194 aa11.9□□□□□ -0.5
GABRB3-219ENST00000636466 IGKV3-20P01619 116 aa11.9□□□□□ -0.5
GABRB3-219ENST00000636466 TWIST1Q15672 202 aa11.9□□□□□ -0.5
GABRB3-219ENST00000636466 OR4B1Q8NGF8 309 aa11.9□□□□□ -0.5
GABRB3-219ENST00000636466 SPSB4Q96A44 273 aa11.9□□□□□ -0.5
GABRB3-219ENST00000636466 IGHV1-18A0A0C4DH31 117 aa11.9□□□□□ -0.51
GABRB3-219ENST00000636466 SFTPCP11686 197 aa11.9□□□□□ -0.51
GABRB3-219ENST00000636466 CCL20P78556 96 aa11.9□□□□□ -0.51
GABRB3-219ENST00000636466 MRPS18CQ9Y3D5 142 aaKnown RBP11.9□□□□□ -0.51
GABRB3-219ENST00000636466 MFAP4P55083 255 aa11.89□□□□□ -0.51
GABRB3-219ENST00000636466 CENPWQ5EE01 88 aa11.89□□□□□ -0.51
GABRB3-219ENST00000636466 ZNF385CQ66K41 422 aaPredicted RBP11.89□□□□□ -0.51
GABRB3-219ENST00000636466 DNM1P46Q6ZS02 220 aa11.89□□□□□ -0.51
GABRB3-219ENST00000636466 LINC00305Q7Z4B0 112 aa11.89□□□□□ -0.51
GABRB3-219ENST00000636466 MRPL18Q9H0U6 180 aaKnown RBP11.89□□□□□ -0.51
GABRB3-219ENST00000636466 GSX1Q9H4S2 264 aaPredicted RBP11.89□□□□□ -0.51
GABRB3-219ENST00000636466 TLN1Q9Y490 2541 aaKnown RBP11.89□□□□□ -0.51
GABRB3-219ENST00000636466 SCGB1C2P0DMR2 95 aa11.89□□□□□ -0.51
GABRB3-219ENST00000636466 SRIP30626 198 aa11.89□□□□□ -0.51
GABRB3-219ENST00000636466 TMEM78Q5T7P6 136 aa11.89□□□□□ -0.51
GABRB3-219ENST00000636466 KIR3DL3Q8N743 410 aa11.89□□□□□ -0.51
GABRB3-219ENST00000636466 FREM1Q5H8C1 2179 aa11.89□□□□□ -0.51
GABRB3-219ENST00000636466 CDK2AP1O14519 115 aa11.89□□□□□ -0.51
GABRB3-219ENST00000636466 ZNF146Q15072 292 aa11.89□□□□□ -0.51
GABRB3-219ENST00000636466 COX19Q49B96 90 aa11.89□□□□□ -0.51
GABRB3-219ENST00000636466 GCSAMLQ5JQS6 135 aa11.89□□□□□ -0.51
GABRB3-219ENST00000636466 ATOH7Q8N100 152 aa11.89□□□□□ -0.51
GABRB3-219ENST00000636466 ZNF525Q8N782 197 aa11.89□□□□□ -0.51
GABRB3-219ENST00000636466 C1orf162Q8NEQ5 155 aaPredicted RBP11.89□□□□□ -0.51
GABRB3-219ENST00000636466 SAA2-SAA4A0A096LPE2 208 aa11.89□□□□□ -0.51
GABRB3-219ENST00000636466 TMEM189A5PLL7 270 aa11.89□□□□□ -0.51
GABRB3-219ENST00000636466 E9PLN8 166 aa11.89□□□□□ -0.51
GABRB3-219ENST00000636466 M0R143 59 aa11.89□□□□□ -0.51
GABRB3-219ENST00000636466 SAA2P0DJI9 122 aaPredicted RBP11.89□□□□□ -0.51
GABRB3-219ENST00000636466 MAP1LC3CQ9BXW4 147 aa11.89□□□□□ -0.51
GABRB3-219ENST00000636466 PNRC2Q9NPJ4 139 aaKnown RBP11.89□□□□□ -0.51
GABRB3-219ENST00000636466 AMY1AP04745 511 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms