RNA–Protein interactions for RNA: ENST00000636020.1

CLN6-212, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-212ENST00000636020 TBCEQ15813 527 aaPredicted RBP13.01□□□□□ -0.33
CLN6-212ENST00000636020 OR2B11Q5JQS5 317 aa13.01□□□□□ -0.33
CLN6-212ENST00000636020 SPSB3Q6PJ21 355 aa13.01□□□□□ -0.33
CLN6-212ENST00000636020 GBGT1Q8N5D6 347 aa13.01□□□□□ -0.33
CLN6-212ENST00000636020 MRPS7Q9Y2R9 242 aaKnown RBP13.01□□□□□ -0.33
CLN6-212ENST00000636020 PRELID3BQ9Y3B1 194 aa13.01□□□□□ -0.33
CLN6-212ENST00000636020 NACAE9PAV3 2078 aa13.01□□□□□ -0.33
CLN6-212ENST00000636020 IGHV7-4-1A0A0J9YVY3 117 aa13□□□□□ -0.33
CLN6-212ENST00000636020 MYL12AP19105 171 aa13□□□□□ -0.33
CLN6-212ENST00000636020 MAPK3P27361 379 aaPredicted RBP13□□□□□ -0.33
CLN6-212ENST00000636020 RPL8P62917 257 aaKnown RBP13□□□□□ -0.33
CLN6-212ENST00000636020 RNF212Q495C1 297 aa13□□□□□ -0.33
CLN6-212ENST00000636020 TMEM41BQ5BJD5 291 aa13□□□□□ -0.33
CLN6-212ENST00000636020 PLAC9Q5JTB6 97 aa13□□□□□ -0.33
CLN6-212ENST00000636020 LEMD1Q68G75 181 aa13□□□□□ -0.33
CLN6-212ENST00000636020 KCTD9Q7L273 389 aa13□□□□□ -0.33
CLN6-212ENST00000636020 ACOT13Q9NPJ3 140 aa13□□□□□ -0.33
CLN6-212ENST00000636020 SRRM2Q9UQ35 2752 aaKnown RBP12.99□□□□□ -0.33
CLN6-212ENST00000636020 IGLC7A0M8Q6 106 aa12.99□□□□□ -0.33
CLN6-212ENST00000636020 EPM2AB3EWF7 344 aa12.99□□□□□ -0.33
CLN6-212ENST00000636020 RAB27BO00194 218 aa12.99□□□□□ -0.33
CLN6-212ENST00000636020 CD1AP06126 327 aa12.99□□□□□ -0.33
CLN6-212ENST00000636020 INAFM2P0DMQ5 153 aa12.99□□□□□ -0.33
CLN6-212ENST00000636020 HLA-GP17693 338 aa12.99□□□□□ -0.33
CLN6-212ENST00000636020 DEFB131AP59861 70 aa12.99□□□□□ -0.33
CLN6-212ENST00000636020 INSL4Q14641 139 aa12.99□□□□□ -0.33
CLN6-212ENST00000636020 ZNF367Q7RTV3 350 aa12.99□□□□□ -0.33
CLN6-212ENST00000636020 STHQ8IWL8 128 aa12.99□□□□□ -0.33
CLN6-212ENST00000636020 H1FOOQ8IZA3 346 aaPredicted RBP12.99□□□□□ -0.33
CLN6-212ENST00000636020 TMEM116Q8NCL8 245 aa12.99□□□□□ -0.33
CLN6-212ENST00000636020 ZNF414Q96IQ9 312 aa12.99□□□□□ -0.33
CLN6-212ENST00000636020 GINS4Q9BRT9 223 aa12.99□□□□□ -0.33
CLN6-212ENST00000636020 LSM2Q9Y333 95 aaKnown RBP12.99□□□□□ -0.33
CLN6-212ENST00000636020 DFFBO76075 338 aa12.98□□□□□ -0.33
CLN6-212ENST00000636020 FCGR3AP08637 254 aa12.98□□□□□ -0.33
CLN6-212ENST00000636020 NPY1RP25929 384 aa12.98□□□□□ -0.33
CLN6-212ENST00000636020 RPL5P46777 297 aaKnown RBP12.98□□□□□ -0.33
CLN6-212ENST00000636020 TAS2R43P59537 309 aa12.98□□□□□ -0.33
CLN6-212ENST00000636020 OR2B8PP59922 312 aa12.98□□□□□ -0.33
CLN6-212ENST00000636020 NEDD8Q15843 81 aa12.98□□□□□ -0.33
CLN6-212ENST00000636020 UBE2UQ5VVX9 321 aa12.98□□□□□ -0.33
CLN6-212ENST00000636020 MORN3Q6PF18 240 aaPredicted RBP12.98□□□□□ -0.33
CLN6-212ENST00000636020 NANOGP1Q8N7R0 232 aa12.98□□□□□ -0.33
CLN6-212ENST00000636020 OR4S2Q8NH73 311 aa12.98□□□□□ -0.33
CLN6-212ENST00000636020 CMTM3Q96MX0 182 aa12.98□□□□□ -0.33
CLN6-212ENST00000636020 ATP6V0BQ99437 205 aa12.98□□□□□ -0.33
CLN6-212ENST00000636020 VPS13BQ7Z7G8 4022 aa12.97□□□□□ -0.33
CLN6-212ENST00000636020 IGHV3-49A0A0A0MS15 119 aa12.97□□□□□ -0.33
CLN6-212ENST00000636020 F8W735 103 aaPredicted RBP12.97□□□□□ -0.33
CLN6-212ENST00000636020 BRWD1-AS2P59051 145 aa12.97□□□□□ -0.33
CLN6-212ENST00000636020 PAFAH1B2P68402 229 aa12.97□□□□□ -0.33
CLN6-212ENST00000636020 TRPT1Q86TN4 253 aaKnown RBP12.97□□□□□ -0.33
CLN6-212ENST00000636020 GIMAP1Q8WWP7 306 aa12.97□□□□□ -0.33
CLN6-212ENST00000636020 MAFIPQ8WZ33 124 aa12.97□□□□□ -0.33
CLN6-212ENST00000636020 PHYHIPQ92561 330 aa12.97□□□□□ -0.33
CLN6-212ENST00000636020 FCGR1BQ92637 280 aa12.97□□□□□ -0.33
CLN6-212ENST00000636020 VCX3AQ9NNX9 186 aa12.97□□□□□ -0.33
CLN6-212ENST00000636020 TBC1D24Q9ULP9 559 aa12.97□□□□□ -0.33
CLN6-212ENST00000636020 KCNK7Q9Y2U2 307 aa12.97□□□□□ -0.33
CLN6-212ENST00000636020 MYL12BO14950 172 aa12.96□□□□□ -0.33
CLN6-212ENST00000636020 C4BPBP20851 252 aa12.96□□□□□ -0.33
CLN6-212ENST00000636020 SSX1Q16384 188 aa12.96□□□□□ -0.33
CLN6-212ENST00000636020 CSNK1G2-AS1Q8NCQ2 148 aa12.96□□□□□ -0.33
CLN6-212ENST00000636020 FAM210BQ96KR6 192 aa12.96□□□□□ -0.33
CLN6-212ENST00000636020 MND1Q9BWT6 205 aa12.96□□□□□ -0.33
CLN6-212ENST00000636020 RBMX2Q9Y388 322 aaKnown RBP12.96□□□□□ -0.33
CLN6-212ENST00000636020 J3QRK9 145 aa12.95□□□□□ -0.34
CLN6-212ENST00000636020 IGLV2-14P01704 120 aa12.95□□□□□ -0.34
CLN6-212ENST00000636020 SPP1P10451 314 aa12.95□□□□□ -0.34
CLN6-212ENST00000636020 MRPS15P82914 257 aaKnown RBP12.95□□□□□ -0.34
CLN6-212ENST00000636020 P2RY14Q15391 338 aa12.95□□□□□ -0.34
CLN6-212ENST00000636020 ACSM3Q53FZ2 586 aa12.95□□□□□ -0.34
CLN6-212ENST00000636020 TCF24Q7RTU0 167 aa12.95□□□□□ -0.34
CLN6-212ENST00000636020 FAM24BQ8N5W8 94 aa12.95□□□□□ -0.34
CLN6-212ENST00000636020 OR10C1Q96KK4 312 aa12.95□□□□□ -0.34
CLN6-212ENST00000636020 SRSF8Q9BRL6 282 aaKnown RBP12.95□□□□□ -0.34
CLN6-212ENST00000636020 TMEM14BQ9NUH8 114 aa12.95□□□□□ -0.34
CLN6-212ENST00000636020 BET1LQ9NYM9 111 aa12.95□□□□□ -0.34
CLN6-212ENST00000636020 C21orf62Q9NYP8 219 aa12.95□□□□□ -0.34
CLN6-212ENST00000636020 IGHV3OR16-13A0A075B7E8 117 aa12.94□□□□□ -0.34
CLN6-212ENST00000636020 IGHV3-21A0A0B4J1V1 117 aa12.94□□□□□ -0.34
CLN6-212ENST00000636020 IGHV3-74A0A0B4J1X5 117 aa12.94□□□□□ -0.34
CLN6-212ENST00000636020 A6NHS1 94 aa12.94□□□□□ -0.34
CLN6-212ENST00000636020 HRASP01112 189 aa12.94□□□□□ -0.34
CLN6-212ENST00000636020 CTSGP08311 255 aa12.94□□□□□ -0.34
CLN6-212ENST00000636020 CD36P16671 472 aa12.94□□□□□ -0.34
CLN6-212ENST00000636020 WNT4P56705 351 aa12.94□□□□□ -0.34
CLN6-212ENST00000636020 OR56B1Q8NGI3 324 aa12.94□□□□□ -0.34
CLN6-212ENST00000636020 OR13F1Q8NGS4 319 aa12.94□□□□□ -0.34
CLN6-212ENST00000636020 SCARB1Q8WTV0 552 aa12.94□□□□□ -0.34
CLN6-212ENST00000636020 DGCR14Q96DF8 476 aaKnown RBP12.94□□□□□ -0.34
CLN6-212ENST00000636020 MS4A6AQ9H2W1 248 aa12.94□□□□□ -0.34
CLN6-212ENST00000636020 BATF3Q9NR55 127 aa12.94□□□□□ -0.34
CLN6-212ENST00000636020 CLEC5AQ9NY25 188 aa12.94□□□□□ -0.34
CLN6-212ENST00000636020 CYB5BO43169 146 aa12.93□□□□□ -0.34
CLN6-212ENST00000636020 CD5P06127 495 aa12.93□□□□□ -0.34
CLN6-212ENST00000636020 PLA2G7Q13093 441 aa12.93□□□□□ -0.34
CLN6-212ENST00000636020 EIF4EBP1Q13541 118 aaPredicted RBP12.93□□□□□ -0.34
CLN6-212ENST00000636020 SPHARQ15513 63 aa12.93□□□□□ -0.34
CLN6-212ENST00000636020 SLC25A24Q6NUK1 477 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms