RNA–Protein interactions for RNA: ENST00000634363.1

SNRNP48-203, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 781 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-203ENST00000634363 UPK2O00526 184 aa11.96□□□□□ -0.49
SNRNP48-203ENST00000634363 B3GALNT1O75752 331 aa11.96□□□□□ -0.49
SNRNP48-203ENST00000634363 SNAPC5O75971 98 aa11.96□□□□□ -0.49
SNRNP48-203ENST00000634363 TRGV3P03979 118 aa11.96□□□□□ -0.49
SNRNP48-203ENST00000634363 FGF2P09038 288 aa11.96□□□□□ -0.49
SNRNP48-203ENST00000634363 TRIM16LQ309B1 348 aa11.96□□□□□ -0.49
SNRNP48-203ENST00000634363 MS4A10Q96PG2 267 aa11.96□□□□□ -0.49
SNRNP48-203ENST00000634363 TP53RKQ96S44 253 aa11.96□□□□□ -0.49
SNRNP48-203ENST00000634363 TSC22D3Q99576 134 aa11.96□□□□□ -0.49
SNRNP48-203ENST00000634363 C5orf66Q9H5L9 145 aa11.96□□□□□ -0.49
SNRNP48-203ENST00000634363 GPR132Q9UNW8 380 aa11.96□□□□□ -0.49
SNRNP48-203ENST00000634363 IGHV4OR15-8A0A075B7B6 117 aa11.95□□□□□ -0.5
SNRNP48-203ENST00000634363 A0A087WW49 117 aa11.95□□□□□ -0.5
SNRNP48-203ENST00000634363 ATG12O94817 140 aa11.95□□□□□ -0.5
SNRNP48-203ENST00000634363 OR9G9P0C7N8 305 aa11.95□□□□□ -0.5
SNRNP48-203ENST00000634363 AKR1C2P52895 323 aa11.95□□□□□ -0.5
SNRNP48-203ENST00000634363 BAK1Q16611 211 aa11.95□□□□□ -0.5
SNRNP48-203ENST00000634363 ACSM6Q6P461 480 aa11.95□□□□□ -0.5
SNRNP48-203ENST00000634363 LINC00299Q6ZSB3 139 aa11.95□□□□□ -0.5
SNRNP48-203ENST00000634363 H2BFWTQ7Z2G1 175 aa11.95□□□□□ -0.5
SNRNP48-203ENST00000634363 SLC25A42Q86VD7 318 aa11.95□□□□□ -0.5
SNRNP48-203ENST00000634363 OR4C12Q96R67 309 aa11.95□□□□□ -0.5
SNRNP48-203ENST00000634363 RTBDNQ9BSG5 229 aaPredicted RBP11.95□□□□□ -0.5
SNRNP48-203ENST00000634363 NAA60Q9H7X0 242 aa11.95□□□□□ -0.5
SNRNP48-203ENST00000634363 PTTG2Q9NZH5 202 aa11.95□□□□□ -0.5
SNRNP48-203ENST00000634363 STAB2Q8WWQ8 2551 aa11.94□□□□□ -0.5
SNRNP48-203ENST00000634363 TNCP24821 2201 aa11.94□□□□□ -0.5
SNRNP48-203ENST00000634363 TRAV3A0A0B4J244 114 aa11.94□□□□□ -0.5
SNRNP48-203ENST00000634363 HMX3A6NHT5 357 aa11.94□□□□□ -0.5
SNRNP48-203ENST00000634363 IGHV3-11P01762 117 aa11.94□□□□□ -0.5
SNRNP48-203ENST00000634363 OR5AC1P0C628 307 aa11.94□□□□□ -0.5
SNRNP48-203ENST00000634363 SP6Q3SY56 376 aa11.94□□□□□ -0.5
SNRNP48-203ENST00000634363 HAPLN4Q86UW8 402 aa11.94□□□□□ -0.5
SNRNP48-203ENST00000634363 SGPP2Q8IWX5 399 aa11.94□□□□□ -0.5
SNRNP48-203ENST00000634363 CADM3Q8N126 398 aa11.94□□□□□ -0.5
SNRNP48-203ENST00000634363 ADAD2Q8NCV1 583 aaKnown RBP11.94□□□□□ -0.5
SNRNP48-203ENST00000634363 RNASE11Q8TAA1 199 aaKnown RBP11.94□□□□□ -0.5
SNRNP48-203ENST00000634363 CITED4Q96RK1 184 aa11.94□□□□□ -0.5
SNRNP48-203ENST00000634363 PRNDQ9UKY0 176 aa11.94□□□□□ -0.5
SNRNP48-203ENST00000634363 LCE6AA0A183 80 aa11.93□□□□□ -0.5
SNRNP48-203ENST00000634363 NAP1L6A6NFF2 107 aa11.93□□□□□ -0.5
SNRNP48-203ENST00000634363 CRYM-AS1A6NIL9 109 aa11.93□□□□□ -0.5
SNRNP48-203ENST00000634363 CENPXA8MT69 81 aa11.93□□□□□ -0.5
SNRNP48-203ENST00000634363 TEX22C9J3V5 150 aa11.93□□□□□ -0.5
SNRNP48-203ENST00000634363 RBMXL2O75526 392 aaKnown RBP11.93□□□□□ -0.5
SNRNP48-203ENST00000634363 IL6RP08887 468 aaPredicted RBP11.93□□□□□ -0.5
SNRNP48-203ENST00000634363 LGALS1P09382 135 aaKnown RBP11.93□□□□□ -0.5
SNRNP48-203ENST00000634363 IL7P13232 177 aa11.93□□□□□ -0.5
SNRNP48-203ENST00000634363 MYOD1P15172 320 aa11.93□□□□□ -0.5
SNRNP48-203ENST00000634363 UCP1P25874 307 aa11.93□□□□□ -0.5
SNRNP48-203ENST00000634363 OR2B8PP59922 312 aa11.93□□□□□ -0.5
SNRNP48-203ENST00000634363 THOC7Q6I9Y2 204 aaKnown RBP11.93□□□□□ -0.5
SNRNP48-203ENST00000634363 S100ZQ8WXG8 99 aa11.93□□□□□ -0.5
SNRNP48-203ENST00000634363 SEC22AQ96IW7 307 aa11.93□□□□□ -0.5
SNRNP48-203ENST00000634363 SDHCQ99643 169 aaPredicted RBP11.93□□□□□ -0.5
SNRNP48-203ENST00000634363 SLC25A21Q9BQT8 299 aaPredicted RBP11.93□□□□□ -0.5
SNRNP48-203ENST00000634363 QTRT1Q9BXR0 403 aaKnown RBP11.93□□□□□ -0.5
SNRNP48-203ENST00000634363 AKIP1Q9NQ31 210 aa11.93□□□□□ -0.5
SNRNP48-203ENST00000634363 FKBP11Q9NYL4 201 aa11.93□□□□□ -0.5
SNRNP48-203ENST00000634363 ZNF257Q9Y2Q1 563 aa11.93□□□□□ -0.5
SNRNP48-203ENST00000634363 A0A0G2JLM5 398 aa11.92□□□□□ -0.5
SNRNP48-203ENST00000634363 C13orf42A0A1B0GVH6 325 aa11.92□□□□□ -0.5
SNRNP48-203ENST00000634363 LINC00854A0A1B0GVQ3 168 aa11.92□□□□□ -0.5
SNRNP48-203ENST00000634363 C15orf61A6NNL5 157 aa11.92□□□□□ -0.5
SNRNP48-203ENST00000634363 NPIPB5A8MRT5 1133 aa11.92□□□□□ -0.5
SNRNP48-203ENST00000634363 E7EUB6 86 aa11.92□□□□□ -0.5
SNRNP48-203ENST00000634363 BRI3O95415 125 aa11.92□□□□□ -0.5
SNRNP48-203ENST00000634363 DHFRP00374 187 aa11.92□□□□□ -0.5
SNRNP48-203ENST00000634363 IGKV1-39P01597 117 aa11.92□□□□□ -0.5
SNRNP48-203ENST00000634363 IGKV1D-39P04432 117 aa11.92□□□□□ -0.5
SNRNP48-203ENST00000634363 HSPB1P04792 205 aaKnown RBP11.92□□□□□ -0.5
SNRNP48-203ENST00000634363 AKR1C4P17516 323 aa11.92□□□□□ -0.5
SNRNP48-203ENST00000634363 DHODHQ02127 395 aa11.92□□□□□ -0.5
SNRNP48-203ENST00000634363 TMED4Q7Z7H5 227 aa11.92□□□□□ -0.5
SNRNP48-203ENST00000634363 TTC9CQ8N5M4 171 aa11.92□□□□□ -0.5
SNRNP48-203ENST00000634363 OR1L8Q8NGR8 309 aa11.92□□□□□ -0.5
SNRNP48-203ENST00000634363 OR4A16Q8NH70 328 aa11.92□□□□□ -0.5
SNRNP48-203ENST00000634363 RRNAD1Q96FB5 475 aaKnown RBP11.92□□□□□ -0.5
SNRNP48-203ENST00000634363 SRSF8Q9BRL6 282 aaKnown RBP11.92□□□□□ -0.5
SNRNP48-203ENST00000634363 TMEM222Q9H0R3 208 aa11.92□□□□□ -0.5
SNRNP48-203ENST00000634363 KCNIP3Q9Y2W7 256 aa11.92□□□□□ -0.5
SNRNP48-203ENST00000634363 NSG2Q9Y328 171 aa11.92□□□□□ -0.5
SNRNP48-203ENST00000634363 OR51B2Q9Y5P1 312 aa11.92□□□□□ -0.5
SNRNP48-203ENST00000634363 TRAPPC2P0DI81 140 aa11.91□□□□□ -0.5
SNRNP48-203ENST00000634363 TRAPPC2BP0DI82 140 aa11.91□□□□□ -0.5
SNRNP48-203ENST00000634363 IGHV4-30-4P0DP06 118 aa11.91□□□□□ -0.5
SNRNP48-203ENST00000634363 ANXA3P12429 323 aa11.91□□□□□ -0.5
SNRNP48-203ENST00000634363 AREGP15514 252 aa11.91□□□□□ -0.5
SNRNP48-203ENST00000634363 RBMS2Q15434 407 aaKnown RBP11.91□□□□□ -0.5
SNRNP48-203ENST00000634363 OR5B3Q8NH48 314 aa11.91□□□□□ -0.5
SNRNP48-203ENST00000634363 C7orf50Q9BRJ6 194 aaKnown RBP11.91□□□□□ -0.5
SNRNP48-203ENST00000634363 TM2D3Q9BRN9 247 aa11.91□□□□□ -0.5
SNRNP48-203ENST00000634363 CCDC32Q9BV29 185 aa11.91□□□□□ -0.5
SNRNP48-203ENST00000634363 ELOVL1Q9BW60 279 aa11.91□□□□□ -0.5
SNRNP48-203ENST00000634363 HINT2Q9BX68 163 aa11.91□□□□□ -0.5
SNRNP48-203ENST00000634363 TEX50A0A1B0GTY4 177 aa11.9□□□□□ -0.5
SNRNP48-203ENST00000634363 A0A1B0GW64 132 aa11.9□□□□□ -0.5
SNRNP48-203ENST00000634363 PRH1P02810 166 aa11.9□□□□□ -0.5
SNRNP48-203ENST00000634363 DEFA4P12838 97 aa11.9□□□□□ -0.5
SNRNP48-203ENST00000634363 PSMB6P28072 239 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms