RNA–Protein interactions for RNA: ENST00000632629.1

NPHP3-ACAD11-202, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 2

Gene NPHP3-ACAD11, Length 695 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-202ENST00000632629 A0A1B0GW54 56 aa0.78□□□□□ -2.28
NPHP3-ACAD11-202ENST00000632629 A0A1B0GX78 115 aa0.78□□□□□ -2.28
NPHP3-ACAD11-202ENST00000632629 B4DEV8 164 aa0.78□□□□□ -2.28
NPHP3-ACAD11-202ENST00000632629 SYNGR2O43760 224 aa0.78□□□□□ -2.28
NPHP3-ACAD11-202ENST00000632629 CXorf1O96002 111 aa0.78□□□□□ -2.28
NPHP3-ACAD11-202ENST00000632629 HLA-DRB1P01911 266 aa0.78□□□□□ -2.28
NPHP3-ACAD11-202ENST00000632629 CLPSP04118 112 aa0.78□□□□□ -2.28
NPHP3-ACAD11-202ENST00000632629 HLA-DQB2P05538 268 aa0.78□□□□□ -2.28
NPHP3-ACAD11-202ENST00000632629 RPSAP08865 295 aaKnown RBP0.78□□□□□ -2.28
NPHP3-ACAD11-202ENST00000632629 SMIM10L2AP0DMW4 78 aa0.78□□□□□ -2.28
NPHP3-ACAD11-202ENST00000632629 SMIM10L2BP0DMW5 78 aa0.78□□□□□ -2.28
NPHP3-ACAD11-202ENST00000632629 TBPL1P62380 186 aa0.78□□□□□ -2.28
NPHP3-ACAD11-202ENST00000632629 FOXF1Q12946 379 aa0.78□□□□□ -2.28
NPHP3-ACAD11-202ENST00000632629 ZNF141Q15928 474 aa0.78□□□□□ -2.28
NPHP3-ACAD11-202ENST00000632629 PCOTHQ58A44 107 aa0.78□□□□□ -2.28
NPHP3-ACAD11-202ENST00000632629 IBA57Q5T440 356 aaKnown RBP0.78□□□□□ -2.28
NPHP3-ACAD11-202ENST00000632629 SPATA12Q7Z6I5 190 aa0.78□□□□□ -2.28
NPHP3-ACAD11-202ENST00000632629 SLC51BQ86UW2 128 aa0.78□□□□□ -2.28
NPHP3-ACAD11-202ENST00000632629 BAP18Q8IXM2 172 aa0.78□□□□□ -2.28
NPHP3-ACAD11-202ENST00000632629 C20orf196Q8IYI0 205 aa0.78□□□□□ -2.28
NPHP3-ACAD11-202ENST00000632629 SLC35F6Q8N357 371 aa0.78□□□□□ -2.28
NPHP3-ACAD11-202ENST00000632629 SMIM20Q8N5G0 67 aa0.78□□□□□ -2.28
NPHP3-ACAD11-202ENST00000632629 GDPD1Q8N9F7 314 aa0.78□□□□□ -2.28
NPHP3-ACAD11-202ENST00000632629 OR11H6Q8NGC7 330 aa0.78□□□□□ -2.28
NPHP3-ACAD11-202ENST00000632629 C2orf15Q8WU43 125 aaKnown RBP0.78□□□□□ -2.28
NPHP3-ACAD11-202ENST00000632629 FAM172AQ8WUF8 416 aa0.78□□□□□ -2.28
NPHP3-ACAD11-202ENST00000632629 ROPN1LQ96C74 230 aa0.78□□□□□ -2.28
NPHP3-ACAD11-202ENST00000632629 GPR146Q96CH1 333 aa0.78□□□□□ -2.28
NPHP3-ACAD11-202ENST00000632629 CNBD2Q96M20 576 aa0.78□□□□□ -2.28
NPHP3-ACAD11-202ENST00000632629 TRIB3Q96RU7 358 aa0.78□□□□□ -2.28
NPHP3-ACAD11-202ENST00000632629 SIGMAR1Q99720 223 aa0.78□□□□□ -2.28
NPHP3-ACAD11-202ENST00000632629 TMEM147Q9BVK8 224 aa0.78□□□□□ -2.28
NPHP3-ACAD11-202ENST00000632629 TRIM4Q9C037 500 aa0.78□□□□□ -2.28
NPHP3-ACAD11-202ENST00000632629 NKX6-2Q9C056 277 aaPredicted RBP0.78□□□□□ -2.28
NPHP3-ACAD11-202ENST00000632629 RNASE7Q9H1E1 156 aaKnown RBP0.78□□□□□ -2.28
NPHP3-ACAD11-202ENST00000632629 TMEM133Q9H2Q1 129 aa0.78□□□□□ -2.28
NPHP3-ACAD11-202ENST00000632629 TRABDQ9H4I3 376 aa0.78□□□□□ -2.28
NPHP3-ACAD11-202ENST00000632629 LRTM1Q9HBL6 345 aa0.78□□□□□ -2.28
NPHP3-ACAD11-202ENST00000632629 CISHQ9NSE2 258 aa0.78□□□□□ -2.28
NPHP3-ACAD11-202ENST00000632629 C14orf105Q9NVL8 296 aa0.78□□□□□ -2.28
NPHP3-ACAD11-202ENST00000632629 DOK5Q9P104 306 aa0.78□□□□□ -2.28
NPHP3-ACAD11-202ENST00000632629 RSL24D1Q9UHA3 163 aaKnown RBP0.78□□□□□ -2.28
NPHP3-ACAD11-202ENST00000632629 NDUFAF1Q9Y375 327 aa0.78□□□□□ -2.28
NPHP3-ACAD11-202ENST00000632629 ICOSQ9Y6W8 199 aa0.78□□□□□ -2.28
NPHP3-ACAD11-202ENST00000632629 U3KQK5 164 aa0.78□□□□□ -2.28
NPHP3-ACAD11-202ENST00000632629 FMN1Q68DA7 1419 aa0.78□□□□□ -2.28
NPHP3-ACAD11-202ENST00000632629 CAMSAP2Q08AD1 1489 aa0.78□□□□□ -2.28
NPHP3-ACAD11-202ENST00000632629 GLI3P10071 1580 aa0.78□□□□□ -2.29
NPHP3-ACAD11-202ENST00000632629 VWDEQ8N2E2 1590 aa0.78□□□□□ -2.29
NPHP3-ACAD11-202ENST00000632629 HELZ2Q9BYK8 2649 aaKnown RBP0.78□□□□□ -2.29
NPHP3-ACAD11-202ENST00000632629 FOCADQ5VW36 1801 aa0.78□□□□□ -2.29
NPHP3-ACAD11-202ENST00000632629 CCDC88AQ3V6T2 1871 aa0.78□□□□□ -2.29
NPHP3-ACAD11-202ENST00000632629 IGKV1-9A0A0C4DH69 117 aa0.77□□□□□ -2.29
NPHP3-ACAD11-202ENST00000632629 A0A0D9SEW6 157 aa0.77□□□□□ -2.29
NPHP3-ACAD11-202ENST00000632629 TMEM269A0A1B0GVZ9 245 aa0.77□□□□□ -2.29
NPHP3-ACAD11-202ENST00000632629 TRAPPC13A5PLN9 417 aa0.77□□□□□ -2.29
NPHP3-ACAD11-202ENST00000632629 KNCNA6PVL3 124 aa0.77□□□□□ -2.29
NPHP3-ACAD11-202ENST00000632629 LEUTXA8MZ59 168 aa0.77□□□□□ -2.29
NPHP3-ACAD11-202ENST00000632629 OR11H12B2RN74 326 aa0.77□□□□□ -2.29
NPHP3-ACAD11-202ENST00000632629 BUB1B-PAK6H3BSN5 160 aa0.77□□□□□ -2.29
NPHP3-ACAD11-202ENST00000632629 C19orf84I3L1E1 186 aa0.77□□□□□ -2.29
NPHP3-ACAD11-202ENST00000632629 K7ERS5 55 aa0.77□□□□□ -2.29
NPHP3-ACAD11-202ENST00000632629 PSCAO43653 123 aa0.77□□□□□ -2.29
NPHP3-ACAD11-202ENST00000632629 GSTZ1O43708 216 aaPredicted RBP0.77□□□□□ -2.29
NPHP3-ACAD11-202ENST00000632629 PDE6DO43924 150 aa0.77□□□□□ -2.29
NPHP3-ACAD11-202ENST00000632629 IFNA1P01562 189 aa0.77□□□□□ -2.29
NPHP3-ACAD11-202ENST00000632629 IGHV3-53P01767 116 aa0.77□□□□□ -2.29
NPHP3-ACAD11-202ENST00000632629 TNNC2P02585 160 aa0.77□□□□□ -2.29
NPHP3-ACAD11-202ENST00000632629 C1QAP02745 245 aa0.77□□□□□ -2.29
NPHP3-ACAD11-202ENST00000632629 CSN2P05814 226 aa0.77□□□□□ -2.29
NPHP3-ACAD11-202ENST00000632629 LGALS1P09382 135 aaKnown RBP0.77□□□□□ -2.29
NPHP3-ACAD11-202ENST00000632629 CPMP14384 443 aa0.77□□□□□ -2.29
NPHP3-ACAD11-202ENST00000632629 CRHBPP24387 322 aa0.77□□□□□ -2.29
NPHP3-ACAD11-202ENST00000632629 RNASE4P34096 147 aaKnown RBP0.77□□□□□ -2.29
NPHP3-ACAD11-202ENST00000632629 GABARAPL2P60520 117 aa0.77□□□□□ -2.29
NPHP3-ACAD11-202ENST00000632629 CCL20P78556 96 aa0.77□□□□□ -2.29
NPHP3-ACAD11-202ENST00000632629 DEFB103AP81534 67 aa0.77□□□□□ -2.29
NPHP3-ACAD11-202ENST00000632629 CAV1Q03135 178 aa0.77□□□□□ -2.29
NPHP3-ACAD11-202ENST00000632629 KCNJ8Q15842 424 aa0.77□□□□□ -2.29
NPHP3-ACAD11-202ENST00000632629 MOGQ16653 247 aa0.77□□□□□ -2.29
NPHP3-ACAD11-202ENST00000632629 KRTAP25-1Q3LHN0 102 aa0.77□□□□□ -2.29
NPHP3-ACAD11-202ENST00000632629 FAM229BQ4G0N7 80 aa0.77□□□□□ -2.29
NPHP3-ACAD11-202ENST00000632629 GOLT1AQ6ZVE7 132 aa0.77□□□□□ -2.29
NPHP3-ACAD11-202ENST00000632629 LYZL2Q7Z4W2 148 aa0.77□□□□□ -2.29
NPHP3-ACAD11-202ENST00000632629 LYPD6Q86Y78 171 aa0.77□□□□□ -2.29
NPHP3-ACAD11-202ENST00000632629 EXOC3-AS1Q8N2X6 119 aa0.77□□□□□ -2.29
NPHP3-ACAD11-202ENST00000632629 BPIFB6Q8NFQ5 453 aa0.77□□□□□ -2.29
NPHP3-ACAD11-202ENST00000632629 OR11H1Q8NG94 326 aa0.77□□□□□ -2.29
NPHP3-ACAD11-202ENST00000632629 OR10P1Q8NGE3 313 aa0.77□□□□□ -2.29
NPHP3-ACAD11-202ENST00000632629 OR13C4Q8NGS5 318 aa0.77□□□□□ -2.29
NPHP3-ACAD11-202ENST00000632629 OR11H2Q8NH07 326 aa0.77□□□□□ -2.29
NPHP3-ACAD11-202ENST00000632629 TEX47Q8TBZ9 253 aa0.77□□□□□ -2.29
NPHP3-ACAD11-202ENST00000632629 SMCR5Q8TEV8 140 aa0.77□□□□□ -2.29
NPHP3-ACAD11-202ENST00000632629 CT55Q8WUE5 264 aa0.77□□□□□ -2.29
NPHP3-ACAD11-202ENST00000632629 SLC7A6Q92536 515 aa0.77□□□□□ -2.29
NPHP3-ACAD11-202ENST00000632629 ADAT3Q96EY9 351 aaPredicted RBP0.77□□□□□ -2.29
NPHP3-ACAD11-202ENST00000632629 CMSS1Q9BQ75 279 aaKnown RBP0.77□□□□□ -2.29
NPHP3-ACAD11-202ENST00000632629 WDR61Q9GZS3 305 aaKnown RBP0.77□□□□□ -2.29
NPHP3-ACAD11-202ENST00000632629 CHST6Q9GZX3 395 aa0.77□□□□□ -2.29
NPHP3-ACAD11-202ENST00000632629 PCBD2Q9H0N5 130 aa0.77□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms