RNA–Protein interactions for RNA: ENST00000629667.2

PDLIM3-213, Transcript of PDZ and LIM domain 3, humanhuman

TSL 5 BASIC

Gene PDLIM3, Length 1,016 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-213ENST00000629667 GDPD1Q8N9F7 314 aa11.49□□□□□ -0.57
PDLIM3-213ENST00000629667 OR10W1Q8NGF6 305 aa11.49□□□□□ -0.57
PDLIM3-213ENST00000629667 SECTM1Q8WVN6 248 aa11.49□□□□□ -0.57
PDLIM3-213ENST00000629667 QTRT1Q9BXR0 403 aaKnown RBP11.49□□□□□ -0.57
PDLIM3-213ENST00000629667 C11orf68Q9H3H3 251 aaKnown RBP11.49□□□□□ -0.57
PDLIM3-213ENST00000629667 DUSP21Q9H596 190 aa11.49□□□□□ -0.57
PDLIM3-213ENST00000629667 CCL28Q9NRJ3 127 aa11.49□□□□□ -0.57
PDLIM3-213ENST00000629667 DNAH6Q9C0G6 4158 aa11.48□□□□□ -0.57
PDLIM3-213ENST00000629667 TMEM235A6NFC5 223 aa11.48□□□□□ -0.57
PDLIM3-213ENST00000629667 CASQ2O14958 399 aaPredicted RBP11.48□□□□□ -0.57
PDLIM3-213ENST00000629667 HPRT1P00492 218 aa11.48□□□□□ -0.57
PDLIM3-213ENST00000629667 NQO2P16083 231 aa11.48□□□□□ -0.57
PDLIM3-213ENST00000629667 ZNF124Q15973 351 aa11.48□□□□□ -0.57
PDLIM3-213ENST00000629667 UBAC2Q8NBM4 344 aa11.48□□□□□ -0.57
PDLIM3-213ENST00000629667 IGHV3-21A0A0B4J1V1 117 aa11.47□□□□□ -0.57
PDLIM3-213ENST00000629667 C15orf62A8K5M9 175 aa11.47□□□□□ -0.57
PDLIM3-213ENST00000629667 IGLL5B9A064 214 aa11.47□□□□□ -0.57
PDLIM3-213ENST00000629667 SULT1C2O00338 296 aa11.47□□□□□ -0.57
PDLIM3-213ENST00000629667 RBFOX2O43251 390 aaKnown RBP eCLIP11.47□□□□□ -0.57
PDLIM3-213ENST00000629667 SERPINE2P07093 398 aa11.47□□□□□ -0.57
PDLIM3-213ENST00000629667 OR13C7P0DN81 318 aa11.47□□□□□ -0.57
PDLIM3-213ENST00000629667 ADMP35318 185 aa11.47□□□□□ -0.57
PDLIM3-213ENST00000629667 TFPI2P48307 235 aa11.47□□□□□ -0.57
PDLIM3-213ENST00000629667 CATR1Q13166 79 aa11.47□□□□□ -0.57
PDLIM3-213ENST00000629667 MSMO1Q15800 293 aa11.47□□□□□ -0.57
PDLIM3-213ENST00000629667 THOC7Q6I9Y2 204 aaKnown RBP11.47□□□□□ -0.57
PDLIM3-213ENST00000629667 HSD17B13Q7Z5P4 300 aaPredicted RBP11.47□□□□□ -0.57
PDLIM3-213ENST00000629667 ZBTB34Q8NCN2 500 aa11.47□□□□□ -0.57
PDLIM3-213ENST00000629667 DMBX1Q8NFW5 382 aa11.47□□□□□ -0.57
PDLIM3-213ENST00000629667 OR13F1Q8NGS4 319 aa11.47□□□□□ -0.57
PDLIM3-213ENST00000629667 ATP6V0BQ99437 205 aa11.47□□□□□ -0.57
PDLIM3-213ENST00000629667 RNF2Q99496 336 aa11.47□□□□□ -0.57
PDLIM3-213ENST00000629667 CHRDL1Q9BU40 450 aa11.47□□□□□ -0.57
PDLIM3-213ENST00000629667 TMEM140Q9NV12 185 aa11.47□□□□□ -0.57
PDLIM3-213ENST00000629667 C21orf62Q9NYP8 219 aa11.47□□□□□ -0.57
PDLIM3-213ENST00000629667 IGKV3-7A0A075B6H7 116 aa11.46□□□□□ -0.57
PDLIM3-213ENST00000629667 DEFB4AO15263 64 aa11.46□□□□□ -0.57
PDLIM3-213ENST00000629667 TRAPPC2P0DI81 140 aa11.46□□□□□ -0.57
PDLIM3-213ENST00000629667 TRAPPC2BP0DI82 140 aa11.46□□□□□ -0.57
PDLIM3-213ENST00000629667 FCGR2CP31995 323 aa11.46□□□□□ -0.57
PDLIM3-213ENST00000629667 ARPC4P59998 168 aa11.46□□□□□ -0.57
PDLIM3-213ENST00000629667 POU2AF1Q16633 256 aa11.46□□□□□ -0.57
PDLIM3-213ENST00000629667 Q56UQ5 140 aa11.46□□□□□ -0.57
PDLIM3-213ENST00000629667 PRSS48Q7RTY5 328 aa11.46□□□□□ -0.57
PDLIM3-213ENST00000629667 SCARB1Q8WTV0 552 aa11.46□□□□□ -0.57
PDLIM3-213ENST00000629667 SMPXQ9UHP9 88 aa11.46□□□□□ -0.57
PDLIM3-213ENST00000629667 ETV7Q9Y603 341 aa11.46□□□□□ -0.57
PDLIM3-213ENST00000629667 RYR1P21817 5038 aa11.46□□□□□ -0.58
PDLIM3-213ENST00000629667 SMIM30A4D0T7 59 aa11.45□□□□□ -0.58
PDLIM3-213ENST00000629667 SSX5O60225 188 aa11.45□□□□□ -0.58
PDLIM3-213ENST00000629667 MRPS14O60783 128 aaKnown RBP11.45□□□□□ -0.58
PDLIM3-213ENST00000629667 SCGNO76038 276 aa11.45□□□□□ -0.58
PDLIM3-213ENST00000629667 FGF2P09038 288 aa11.45□□□□□ -0.58
PDLIM3-213ENST00000629667 MFAP2P55001 183 aa11.45□□□□□ -0.58
PDLIM3-213ENST00000629667 WT1-ASQ06250 92 aa11.45□□□□□ -0.58
PDLIM3-213ENST00000629667 CMTM3Q96MX0 182 aa11.45□□□□□ -0.58
PDLIM3-213ENST00000629667 RHPN1-AS1Q9BWJ2 59 aa11.45□□□□□ -0.58
PDLIM3-213ENST00000629667 SLC5A7Q9GZV3 580 aa11.45□□□□□ -0.58
PDLIM3-213ENST00000629667 APLNQ9ULZ1 77 aa11.45□□□□□ -0.58
PDLIM3-213ENST00000629667 IGHV7-4-1A0A0J9YVY3 117 aa11.44□□□□□ -0.58
PDLIM3-213ENST00000629667 TEX50A0A1B0GTY4 177 aa11.44□□□□□ -0.58
PDLIM3-213ENST00000629667 TRDV1A0A1B0GX56 115 aa11.44□□□□□ -0.58
PDLIM3-213ENST00000629667 C11orf94C9JXX5 98 aa11.44□□□□□ -0.58
PDLIM3-213ENST00000629667 F8W735 103 aaPredicted RBP11.44□□□□□ -0.58
PDLIM3-213ENST00000629667 CHEK1O14757 476 aa11.44□□□□□ -0.58
PDLIM3-213ENST00000629667 XRCC3O43542 346 aa11.44□□□□□ -0.58
PDLIM3-213ENST00000629667 CA1P00915 261 aaPredicted RBP11.44□□□□□ -0.58
PDLIM3-213ENST00000629667 PPYP01298 95 aa11.44□□□□□ -0.58
PDLIM3-213ENST00000629667 PTHLHP12272 177 aa11.44□□□□□ -0.58
PDLIM3-213ENST00000629667 TMEM187Q14656 261 aa11.44□□□□□ -0.58
PDLIM3-213ENST00000629667 LINC00336Q6ZUF6 198 aa11.44□□□□□ -0.58
PDLIM3-213ENST00000629667 NR2C2APQ86WQ0 139 aa11.44□□□□□ -0.58
PDLIM3-213ENST00000629667 GVQW1Q8N7I0 195 aa11.44□□□□□ -0.58
PDLIM3-213ENST00000629667 TMEM116Q8NCL8 245 aa11.44□□□□□ -0.58
PDLIM3-213ENST00000629667 BEST4Q8NFU0 473 aa11.44□□□□□ -0.58
PDLIM3-213ENST00000629667 OR1L8Q8NGR8 309 aa11.44□□□□□ -0.58
PDLIM3-213ENST00000629667 OR51H1Q8NH63 302 aa11.44□□□□□ -0.58
PDLIM3-213ENST00000629667 HINT2Q9BX68 163 aa11.44□□□□□ -0.58
PDLIM3-213ENST00000629667 PLEKHA2Q9HB19 425 aa11.44□□□□□ -0.58
PDLIM3-213ENST00000629667 F11RQ9Y624 299 aaKnown RBP11.44□□□□□ -0.58
PDLIM3-213ENST00000629667 IGHV3-49A0A0A0MS15 119 aa11.43□□□□□ -0.58
PDLIM3-213ENST00000629667 YIF1AO95070 293 aa11.43□□□□□ -0.58
PDLIM3-213ENST00000629667 FXYD4P59646 89 aa11.43□□□□□ -0.58
PDLIM3-213ENST00000629667 ERVK-16P61578 105 aa11.43□□□□□ -0.58
PDLIM3-213ENST00000629667 PAFAH1B2P68402 229 aa11.43□□□□□ -0.58
PDLIM3-213ENST00000629667 RELQ04864 619 aaPredicted RBP11.43□□□□□ -0.58
PDLIM3-213ENST00000629667 C22orf42Q6IC83 251 aa11.43□□□□□ -0.58
PDLIM3-213ENST00000629667 ZNF773Q6PK81 442 aa11.43□□□□□ -0.58
PDLIM3-213ENST00000629667 ZNF367Q7RTV3 350 aa11.43□□□□□ -0.58
PDLIM3-213ENST00000629667 GBGT1Q8N5D6 347 aa11.43□□□□□ -0.58
PDLIM3-213ENST00000629667 LSM10Q969L4 123 aaKnown RBP11.43□□□□□ -0.58
PDLIM3-213ENST00000629667 NDUFB11Q9NX14 153 aa11.43□□□□□ -0.58
PDLIM3-213ENST00000629667 K7EIM0 57 aa11.42□□□□□ -0.58
PDLIM3-213ENST00000629667 NUPL2O15504 423 aaKnown RBP11.42□□□□□ -0.58
PDLIM3-213ENST00000629667 CTSGP08311 255 aa11.42□□□□□ -0.58
PDLIM3-213ENST00000629667 TBCEQ15813 527 aaPredicted RBP11.42□□□□□ -0.58
PDLIM3-213ENST00000629667 AADACL3Q5VUY0 350 aa11.42□□□□□ -0.58
PDLIM3-213ENST00000629667 NDUFA4L2Q9NRX3 87 aa11.42□□□□□ -0.58
PDLIM3-213ENST00000629667 COMMD9Q9P000 198 aa11.42□□□□□ -0.58
PDLIM3-213ENST00000629667 TRAV14DV4A0A0A6YYC5 116 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms