RNA–Protein interactions for RNA: ENST00000626948.2

SOX2-OT-241, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 836 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-241ENST00000626948 CHRDL1Q9BU40 450 aa10.08□□□□□ -0.8
SOX2-OT-241ENST00000626948 ZNF436Q9C0F3 470 aaPredicted RBP10.08□□□□□ -0.8
SOX2-OT-241ENST00000626948 DIABLOQ9NR28 239 aa10.08□□□□□ -0.8
SOX2-OT-241ENST00000626948 NDUFA4L2Q9NRX3 87 aa10.08□□□□□ -0.8
SOX2-OT-241ENST00000626948 EHFQ9NZC4 300 aa10.08□□□□□ -0.8
SOX2-OT-241ENST00000626948 PMP2P02689 132 aa10.07□□□□□ -0.8
SOX2-OT-241ENST00000626948 EIF4EP06730 217 aaKnown RBP10.07□□□□□ -0.8
SOX2-OT-241ENST00000626948 SERPINE2P07093 398 aa10.07□□□□□ -0.8
SOX2-OT-241ENST00000626948 FGF2P09038 288 aa10.07□□□□□ -0.8
SOX2-OT-241ENST00000626948 DEFA4P12838 97 aa10.07□□□□□ -0.8
SOX2-OT-241ENST00000626948 ADMP35318 185 aa10.07□□□□□ -0.8
SOX2-OT-241ENST00000626948 LSM3P62310 102 aaKnown RBP10.07□□□□□ -0.8
SOX2-OT-241ENST00000626948 CATR1Q13166 79 aa10.07□□□□□ -0.8
SOX2-OT-241ENST00000626948 FAM106AQ4KMX7 169 aa10.07□□□□□ -0.8
SOX2-OT-241ENST00000626948 AADACL3Q5VUY0 350 aa10.07□□□□□ -0.8
SOX2-OT-241ENST00000626948 GDPD1Q8N9F7 314 aa10.07□□□□□ -0.8
SOX2-OT-241ENST00000626948 QTRT1Q9BXR0 403 aaKnown RBP10.07□□□□□ -0.8
SOX2-OT-241ENST00000626948 Q9H521 79 aa10.07□□□□□ -0.8
SOX2-OT-241ENST00000626948 MARCH11A6NNE9 402 aa10.06□□□□□ -0.8
SOX2-OT-241ENST00000626948 K7EIM0 57 aa10.06□□□□□ -0.8
SOX2-OT-241ENST00000626948 TGOLN2O43493 480 aa10.06□□□□□ -0.8
SOX2-OT-241ENST00000626948 DHFRP00374 187 aa10.06□□□□□ -0.8
SOX2-OT-241ENST00000626948 IGKV1-39P01597 117 aa10.06□□□□□ -0.8
SOX2-OT-241ENST00000626948 IGKV1D-39P04432 117 aa10.06□□□□□ -0.8
SOX2-OT-241ENST00000626948 OR13C7P0DN81 318 aa10.06□□□□□ -0.8
SOX2-OT-241ENST00000626948 F2RP25116 425 aa10.06□□□□□ -0.8
SOX2-OT-241ENST00000626948 LPAR6P43657 344 aa10.06□□□□□ -0.8
SOX2-OT-241ENST00000626948 CBX5P45973 191 aa10.06□□□□□ -0.8
SOX2-OT-241ENST00000626948 SAMD12Q8N8I0 201 aa10.06□□□□□ -0.8
SOX2-OT-241ENST00000626948 DMBX1Q8NFW5 382 aa10.06□□□□□ -0.8
SOX2-OT-241ENST00000626948 TMEM190Q8WZ59 177 aa10.06□□□□□ -0.8
SOX2-OT-241ENST00000626948 CXorf58Q96LI9 332 aa10.06□□□□□ -0.8
SOX2-OT-241ENST00000626948 SRSF8Q9BRL6 282 aaKnown RBP10.06□□□□□ -0.8
SOX2-OT-241ENST00000626948 COMMD5Q9GZQ3 224 aa10.06□□□□□ -0.8
SOX2-OT-241ENST00000626948 COMMD9Q9P000 198 aa10.06□□□□□ -0.8
SOX2-OT-241ENST00000626948 IGHV3OR16-8A0A075B7F1 116 aa10.05□□□□□ -0.8
SOX2-OT-241ENST00000626948 OR2T8A6NH00 312 aa10.05□□□□□ -0.8
SOX2-OT-241ENST00000626948 KRASP01116 189 aa10.05□□□□□ -0.8
SOX2-OT-241ENST00000626948 TRAPPC2P0DI81 140 aa10.05□□□□□ -0.8
SOX2-OT-241ENST00000626948 TRAPPC2BP0DI82 140 aa10.05□□□□□ -0.8
SOX2-OT-241ENST00000626948 G6PCP35575 357 aa10.05□□□□□ -0.8
SOX2-OT-241ENST00000626948 UBE2NLQ5JXB2 153 aa10.05□□□□□ -0.8
SOX2-OT-241ENST00000626948 OR52B4Q8NGK2 314 aa10.05□□□□□ -0.8
SOX2-OT-241ENST00000626948 VN1R17PQ8TDU5 208 aa10.05□□□□□ -0.8
SOX2-OT-241ENST00000626948 SCARB1Q8WTV0 552 aa10.05□□□□□ -0.8
SOX2-OT-241ENST00000626948 DGCR14Q96DF8 476 aaKnown RBP10.05□□□□□ -0.8
SOX2-OT-241ENST00000626948 S100A16Q96FQ6 103 aaKnown RBP10.05□□□□□ -0.8
SOX2-OT-241ENST00000626948 F11RQ9Y624 299 aaKnown RBP10.05□□□□□ -0.8
SOX2-OT-241ENST00000626948 TMEM127O75204 238 aa10.04□□□□□ -0.8
SOX2-OT-241ENST00000626948 HRH1P35367 487 aa10.04□□□□□ -0.8
SOX2-OT-241ENST00000626948 ELLP55199 621 aaPredicted RBP10.04□□□□□ -0.8
SOX2-OT-241ENST00000626948 HERV-K104P61576 105 aa10.04□□□□□ -0.8
SOX2-OT-241ENST00000626948 ODF3L2Q3SX64 289 aa10.04□□□□□ -0.8
SOX2-OT-241ENST00000626948 SLC25A24Q6NUK1 477 aa10.04□□□□□ -0.8
SOX2-OT-241ENST00000626948 PLET1Q6UQ28 207 aa10.04□□□□□ -0.8
SOX2-OT-241ENST00000626948 SLC16A13Q7RTY0 426 aa10.04□□□□□ -0.8
SOX2-OT-241ENST00000626948 CD300LFQ8TDQ1 290 aa10.04□□□□□ -0.8
SOX2-OT-241ENST00000626948 GPX8Q8TED1 209 aa10.04□□□□□ -0.8
SOX2-OT-241ENST00000626948 AIFM2Q9BRQ8 373 aa10.04□□□□□ -0.8
SOX2-OT-241ENST00000626948 GGTLC1Q9BX51 225 aa10.04□□□□□ -0.8
SOX2-OT-241ENST00000626948 IFT46Q9NQC8 304 aa10.04□□□□□ -0.8
SOX2-OT-241ENST00000626948 MRPL27Q9P0M9 148 aaKnown RBP10.04□□□□□ -0.8
SOX2-OT-241ENST00000626948 UBQLN2Q9UHD9 624 aa10.04□□□□□ -0.8
SOX2-OT-241ENST00000626948 DNAH10Q8IVF4 4471 aa10.04□□□□□ -0.8
SOX2-OT-241ENST00000626948 TRAV25A0A0B4J276 109 aa10.03□□□□□ -0.8
SOX2-OT-241ENST00000626948 ZNF207O43670 478 aaKnown RBP10.03□□□□□ -0.8
SOX2-OT-241ENST00000626948 HLA-DMAP28067 261 aa10.03□□□□□ -0.8
SOX2-OT-241ENST00000626948 NCS1P62166 190 aa10.03□□□□□ -0.8
SOX2-OT-241ENST00000626948 TMEM69Q5SWH9 247 aa10.03□□□□□ -0.8
SOX2-OT-241ENST00000626948 CADM3Q8N126 398 aa10.03□□□□□ -0.8
SOX2-OT-241ENST00000626948 OR1L8Q8NGR8 309 aa10.03□□□□□ -0.8
SOX2-OT-241ENST00000626948 MARC2Q969Z3 335 aa10.03□□□□□ -0.8
SOX2-OT-241ENST00000626948 SLC25A46Q96AG3 418 aa10.03□□□□□ -0.8
SOX2-OT-241ENST00000626948 SEC22AQ96IW7 307 aa10.03□□□□□ -0.8
SOX2-OT-241ENST00000626948 C5orf66Q9H5L9 145 aa10.03□□□□□ -0.8
SOX2-OT-241ENST00000626948 TMEM14BQ9NUH8 114 aa10.03□□□□□ -0.8
SOX2-OT-241ENST00000626948 OR51B2Q9Y5P1 312 aa10.03□□□□□ -0.8
SOX2-OT-241ENST00000626948 VPS13DQ5THJ4 4388 aa10.02□□□□□ -0.81
SOX2-OT-241ENST00000626948 LOC102724200A0A096LPH7 203 aaPredicted RBP10.02□□□□□ -0.81
SOX2-OT-241ENST00000626948 GPR31O00270 319 aa10.02□□□□□ -0.81
SOX2-OT-241ENST00000626948 TSPAN4O14817 238 aa10.02□□□□□ -0.81
SOX2-OT-241ENST00000626948 CTSGP08311 255 aa10.02□□□□□ -0.81
SOX2-OT-241ENST00000626948 PHLDA2Q53GA4 152 aa10.02□□□□□ -0.81
SOX2-OT-241ENST00000626948 OR1L6Q8NGR2 347 aa10.02□□□□□ -0.81
SOX2-OT-241ENST00000626948 OR5H2Q8NGV7 314 aa10.02□□□□□ -0.81
SOX2-OT-241ENST00000626948 LSM10Q969L4 123 aaKnown RBP10.02□□□□□ -0.81
SOX2-OT-241ENST00000626948 HINT2Q9BX68 163 aa10.02□□□□□ -0.81
SOX2-OT-241ENST00000626948 C21orf62Q9NYP8 219 aa10.02□□□□□ -0.81
SOX2-OT-241ENST00000626948 UFC1Q9Y3C8 167 aa10.02□□□□□ -0.81
SOX2-OT-241ENST00000626948 C15orf61A6NNL5 157 aa10.01□□□□□ -0.81
SOX2-OT-241ENST00000626948 I3L2K1 104 aa10.01□□□□□ -0.81
SOX2-OT-241ENST00000626948 PRSS3P35030 304 aa10.01□□□□□ -0.81
SOX2-OT-241ENST00000626948 ZNF124Q15973 351 aa10.01□□□□□ -0.81
SOX2-OT-241ENST00000626948 IZUMO4Q1ZYL8 232 aa10.01□□□□□ -0.81
SOX2-OT-241ENST00000626948 THOC7Q6I9Y2 204 aaKnown RBP10.01□□□□□ -0.81
SOX2-OT-241ENST00000626948 CROCCP3Q8IVE0 287 aa10.01□□□□□ -0.81
SOX2-OT-241ENST00000626948 OR2C3Q8N628 320 aa10.01□□□□□ -0.81
SOX2-OT-241ENST00000626948 OR6F1Q8NGZ6 308 aa10.01□□□□□ -0.81
SOX2-OT-241ENST00000626948 IL17DQ8TAD2 202 aa10.01□□□□□ -0.81
SOX2-OT-241ENST00000626948 BSCL2Q96G97 398 aaPredicted RBP10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms