RNA–Protein interactions for RNA: ENST00000626028.1

SF1-220, Transcript of splicing factor 1, humanhuman

TSL 2 BASIC

Gene SF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-220ENST00000626028 STEAP1BQ6NZ63 245 aa17.07■□□□□ 0.32
SF1-220ENST00000626028 IL34Q6ZMJ4 242 aa17.07■□□□□ 0.32
SF1-220ENST00000626028 SLIRPQ9GZT3 109 aaKnown RBP17.07■□□□□ 0.32
SF1-220ENST00000626028 NDUFA4L2Q9NRX3 87 aa17.07■□□□□ 0.32
SF1-220ENST00000626028 TMEM14BQ9NUH8 114 aa17.07■□□□□ 0.32
SF1-220ENST00000626028 SMAD5-AS1Q9Y6J3 95 aa17.07■□□□□ 0.32
SF1-220ENST00000626028 TEX50A0A1B0GTY4 177 aa17.06■□□□□ 0.32
SF1-220ENST00000626028 H0Y980 276 aa17.06■□□□□ 0.32
SF1-220ENST00000626028 GGCTO75223 188 aaKnown RBP17.06■□□□□ 0.32
SF1-220ENST00000626028 RAB3DO95716 219 aa17.06■□□□□ 0.32
SF1-220ENST00000626028 SERPINE2P07093 398 aa17.06■□□□□ 0.32
SF1-220ENST00000626028 GP9P14770 177 aa17.06■□□□□ 0.32
SF1-220ENST00000626028 MYOD1P15172 320 aa17.06■□□□□ 0.32
SF1-220ENST00000626028 RNASE12Q5GAN4 147 aaKnown RBP17.06■□□□□ 0.32
SF1-220ENST00000626028 GDPD1Q8N9F7 314 aa17.06■□□□□ 0.32
SF1-220ENST00000626028 LSM10Q969L4 123 aaKnown RBP17.06■□□□□ 0.32
SF1-220ENST00000626028 SEC22AQ96IW7 307 aa17.06■□□□□ 0.32
SF1-220ENST00000626028 TMEM56Q96MV1 263 aa17.06■□□□□ 0.32
SF1-220ENST00000626028 RSL24D1Q9UHA3 163 aaKnown RBP17.06■□□□□ 0.32
SF1-220ENST00000626028 DMRT1Q9Y5R6 373 aa17.06■□□□□ 0.32
SF1-220ENST00000626028 LGALS9O00182 355 aa17.05■□□□□ 0.32
SF1-220ENST00000626028 PGAM2P15259 253 aa17.05■□□□□ 0.32
SF1-220ENST00000626028 IL18Q14116 193 aa17.05■□□□□ 0.32
SF1-220ENST00000626028 GPHB5Q86YW7 130 aa17.05■□□□□ 0.32
SF1-220ENST00000626028 CCDC71LQ8N9Z2 235 aa17.05■□□□□ 0.32
SF1-220ENST00000626028 OR1L6Q8NGR2 347 aa17.05■□□□□ 0.32
SF1-220ENST00000626028 OR2K2Q8NGT1 345 aa17.05■□□□□ 0.32
SF1-220ENST00000626028 ATP6V0BQ99437 205 aa17.05■□□□□ 0.32
SF1-220ENST00000626028 C6orf62Q9GZU0 229 aaPredicted RBP17.05■□□□□ 0.32
SF1-220ENST00000626028 OR51B2Q9Y5P1 312 aa17.05■□□□□ 0.32
SF1-220ENST00000626028 C15orf61A6NNL5 157 aa17.04■□□□□ 0.32
SF1-220ENST00000626028 GSTZ1O43708 216 aaPredicted RBP17.04■□□□□ 0.32
SF1-220ENST00000626028 ATG12O94817 140 aa17.04■□□□□ 0.32
SF1-220ENST00000626028 NDUFB8O95169 186 aa17.04■□□□□ 0.32
SF1-220ENST00000626028 REG1AP05451 166 aa17.04■□□□□ 0.32
SF1-220ENST00000626028 PIGPP57054 158 aa17.04■□□□□ 0.32
SF1-220ENST00000626028 SURF2Q15527 256 aaPredicted RBP17.04■□□□□ 0.32
SF1-220ENST00000626028 H2BFWTQ7Z2G1 175 aa17.04■□□□□ 0.32
SF1-220ENST00000626028 VN1R17PQ8TDU5 208 aa17.04■□□□□ 0.32
SF1-220ENST00000626028 CCDC140Q96MF4 163 aa17.04■□□□□ 0.32
SF1-220ENST00000626028 NXF2Q9GZY0 626 aaKnown RBP17.04■□□□□ 0.32
SF1-220ENST00000626028 CSN3P07498 182 aa17.03■□□□□ 0.32
SF1-220ENST00000626028 OR13C7P0DN81 318 aa17.03■□□□□ 0.32
SF1-220ENST00000626028 WT1-ASQ06250 92 aa17.03■□□□□ 0.32
SF1-220ENST00000626028 LCN12Q6JVE5 192 aa17.03■□□□□ 0.32
SF1-220ENST00000626028 OR4D10Q8NGI6 311 aa17.03■□□□□ 0.32
SF1-220ENST00000626028 CEPT1Q9Y6K0 416 aa17.03■□□□□ 0.32
SF1-220ENST00000626028 AKAIN1P0CW23 69 aa17.02■□□□□ 0.32
SF1-220ENST00000626028 ARL3P36405 182 aa17.02■□□□□ 0.32
SF1-220ENST00000626028 C19orf35Q6ZS72 473 aa17.02■□□□□ 0.32
SF1-220ENST00000626028 Q8N402 240 aa17.02■□□□□ 0.32
SF1-220ENST00000626028 OR10W1Q8NGF6 305 aa17.02■□□□□ 0.32
SF1-220ENST00000626028 MCFD2Q8NI22 146 aa17.02■□□□□ 0.32
SF1-220ENST00000626028 COPZ2Q9P299 210 aa17.02■□□□□ 0.32
SF1-220ENST00000626028 DISC1C4P0D8 188 aa17.01■□□□□ 0.31
SF1-220ENST00000626028 ZNF701M0R085 212 aaPredicted RBP17.01■□□□□ 0.31
SF1-220ENST00000626028 IGKV1-39P01597 117 aa17.01■□□□□ 0.31
SF1-220ENST00000626028 IGKV1D-39P04432 117 aa17.01■□□□□ 0.31
SF1-220ENST00000626028 CTSDP07339 412 aaPredicted RBP17.01■□□□□ 0.31
SF1-220ENST00000626028 MECP2P51608 486 aaKnown RBP17.01■□□□□ 0.31
SF1-220ENST00000626028 SCGB2B2Q4G0G5 96 aa17.01■□□□□ 0.31
SF1-220ENST00000626028 CLEC19AQ6UXS0 136 aa17.01■□□□□ 0.31
SF1-220ENST00000626028 OR4A16Q8NH70 328 aa17.01■□□□□ 0.31
SF1-220ENST00000626028 PRRT1Q99946 306 aa17.01■□□□□ 0.31
SF1-220ENST00000626028 SOSTQ9BQB4 213 aa17.01■□□□□ 0.31
SF1-220ENST00000626028 F11RQ9Y624 299 aaKnown RBP17.01■□□□□ 0.31
SF1-220ENST00000626028 C3orf85A0A1B0GTC6 90 aa17■□□□□ 0.31
SF1-220ENST00000626028 TNFSF8P32971 234 aa17■□□□□ 0.31
SF1-220ENST00000626028 PPP5CP53041 499 aa17■□□□□ 0.31
SF1-220ENST00000626028 FAM106AQ4KMX7 169 aa17■□□□□ 0.31
SF1-220ENST00000626028 OR13C8Q8NGS7 320 aa17■□□□□ 0.31
SF1-220ENST00000626028 MRGPRFQ96AM1 343 aa17■□□□□ 0.31
SF1-220ENST00000626028 SLC2A8Q9NY64 477 aa17■□□□□ 0.31
SF1-220ENST00000626028 NSG2Q9Y328 171 aa17■□□□□ 0.31
SF1-220ENST00000626028 FABP12A6NFH5 140 aa16.99■□□□□ 0.31
SF1-220ENST00000626028 A8MWP6 167 aa16.99■□□□□ 0.31
SF1-220ENST00000626028 PPP5D1E7EU14 171 aa16.99■□□□□ 0.31
SF1-220ENST00000626028 PI3P19957 117 aa16.99■□□□□ 0.31
SF1-220ENST00000626028 OR1P1Q8NH06 330 aa16.99■□□□□ 0.31
SF1-220ENST00000626028 ZNF502Q8TBZ5 544 aa16.99■□□□□ 0.31
SF1-220ENST00000626028 TP53RKQ96S44 253 aa16.99■□□□□ 0.31
SF1-220ENST00000626028 HINT2Q9BX68 163 aa16.99■□□□□ 0.31
SF1-220ENST00000626028 TECRQ9NZ01 308 aaKnown RBP16.99■□□□□ 0.31
SF1-220ENST00000626028 C14orf166Q9Y224 244 aaKnown RBP16.99■□□□□ 0.31
SF1-220ENST00000626028 ANKRD20A5PA0PJZ0 165 aa16.98■□□□□ 0.31
SF1-220ENST00000626028 MFSD2BA6NFX1 497 aa16.98■□□□□ 0.31
SF1-220ENST00000626028 A8MZ25 164 aa16.98■□□□□ 0.31
SF1-220ENST00000626028 OR2C1O95371 312 aa16.98■□□□□ 0.31
SF1-220ENST00000626028 CLEC3BP05452 202 aa16.98■□□□□ 0.31
SF1-220ENST00000626028 UCP1P25874 307 aa16.98■□□□□ 0.31
SF1-220ENST00000626028 PRCDQ00LT1 54 aa16.98■□□□□ 0.31
SF1-220ENST00000626028 ZNF114Q8NC26 417 aa16.98■□□□□ 0.31
SF1-220ENST00000626028 MARCH1Q8TCQ1 289 aa16.98■□□□□ 0.31
SF1-220ENST00000626028 DNAH9Q9NYC9 4486 aa16.97■□□□□ 0.31
SF1-220ENST00000626028 P0C879 139 aa16.97■□□□□ 0.31
SF1-220ENST00000626028 HSPE1P61604 102 aaKnown RBP16.97■□□□□ 0.31
SF1-220ENST00000626028 SLC25A24Q6NUK1 477 aa16.97■□□□□ 0.31
SF1-220ENST00000626028 SPSB3Q6PJ21 355 aa16.97■□□□□ 0.31
SF1-220ENST00000626028 OR4C16Q8NGL9 310 aa16.97■□□□□ 0.31
SF1-220ENST00000626028 SCGB3A2Q96PL1 93 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms