RNA–Protein interactions for RNA: ENST00000621999.4

SCAMP1-207, Transcript of secretory carrier membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP1, Length 4,509 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-207ENST00000621999 TNCP24821 2201 aa10.14□□□□□ -0.79
SCAMP1-207ENST00000621999 CFAP47Q6ZTR5 3102 aa10.13□□□□□ -0.79
SCAMP1-207ENST00000621999 ANKRD34BA5PLL1 514 aa10.13□□□□□ -0.79
SCAMP1-207ENST00000621999 IGHV4-38-2P0DP08 117 aa10.13□□□□□ -0.79
SCAMP1-207ENST00000621999 SRD5A1P18405 259 aa10.13□□□□□ -0.79
SCAMP1-207ENST00000621999 PSG5Q15238 335 aa10.13□□□□□ -0.79
SCAMP1-207ENST00000621999 OR10W1Q8NGF6 305 aa10.13□□□□□ -0.79
SCAMP1-207ENST00000621999 A0A1B0GWJ7 208 aa10.13□□□□□ -0.79
SCAMP1-207ENST00000621999 CD1BP29016 333 aa10.13□□□□□ -0.79
SCAMP1-207ENST00000621999 COX7A2P2O60397 106 aa10.13□□□□□ -0.79
SCAMP1-207ENST00000621999 CNTFRP26992 372 aa10.13□□□□□ -0.79
SCAMP1-207ENST00000621999 SLC35B1P78383 322 aa10.13□□□□□ -0.79
SCAMP1-207ENST00000621999 UTF1Q5T230 341 aa10.13□□□□□ -0.79
SCAMP1-207ENST00000621999 RPH3ALQ9UNE2 315 aa10.13□□□□□ -0.79
SCAMP1-207ENST00000621999 A0A0G2JRQ6 117 aa10.12□□□□□ -0.79
SCAMP1-207ENST00000621999 OR7C2O60412 319 aa10.12□□□□□ -0.79
SCAMP1-207ENST00000621999 SCAF4O95104 1147 aaKnown RBP10.12□□□□□ -0.79
SCAMP1-207ENST00000621999 VENTXO95231 258 aa10.12□□□□□ -0.79
SCAMP1-207ENST00000621999 C1orf122Q6ZSJ8 110 aa10.12□□□□□ -0.79
SCAMP1-207ENST00000621999 FAM216AQ8WUB2 273 aa10.12□□□□□ -0.79
SCAMP1-207ENST00000621999 H2AFB1P0C5Y9 115 aa10.12□□□□□ -0.79
SCAMP1-207ENST00000621999 HOXB4P17483 251 aaPredicted RBP10.12□□□□□ -0.79
SCAMP1-207ENST00000621999 ATP6V1FQ16864 119 aa10.12□□□□□ -0.79
SCAMP1-207ENST00000621999 FFAR4Q5NUL3 377 aa10.12□□□□□ -0.79
SCAMP1-207ENST00000621999 RBM14Q96PK6 669 aaKnown RBP10.12□□□□□ -0.79
SCAMP1-207ENST00000621999 C15orf61A6NNL5 157 aa10.12□□□□□ -0.79
SCAMP1-207ENST00000621999 OR2J3O76001 311 aa10.12□□□□□ -0.79
SCAMP1-207ENST00000621999 TUSC1Q2TAM9 212 aa10.12□□□□□ -0.79
SCAMP1-207ENST00000621999 C11orf91Q3C1V1 193 aa10.12□□□□□ -0.79
SCAMP1-207ENST00000621999 MIDNQ504T8 468 aa10.12□□□□□ -0.79
SCAMP1-207ENST00000621999 TEX45Q8NA69 505 aa10.12□□□□□ -0.79
SCAMP1-207ENST00000621999 P2RX4Q99571 388 aa10.12□□□□□ -0.79
SCAMP1-207ENST00000621999 ATP5SQ99766 215 aa10.12□□□□□ -0.79
SCAMP1-207ENST00000621999 NPFFR1Q9GZQ6 430 aa10.12□□□□□ -0.79
SCAMP1-207ENST00000621999 NUPL2O15504 423 aaKnown RBP10.12□□□□□ -0.79
SCAMP1-207ENST00000621999 SLC25A4P12235 298 aa10.12□□□□□ -0.79
SCAMP1-207ENST00000621999 CXCL2P19875 107 aa10.12□□□□□ -0.79
SCAMP1-207ENST00000621999 RND2P52198 227 aa10.12□□□□□ -0.79
SCAMP1-207ENST00000621999 LYZP61626 148 aa10.12□□□□□ -0.79
SCAMP1-207ENST00000621999 RUNX1Q01196 453 aa10.12□□□□□ -0.79
SCAMP1-207ENST00000621999 ACOT6Q3I5F7 207 aaPredicted RBP10.12□□□□□ -0.79
SCAMP1-207ENST00000621999 Q6ZRM9 215 aa10.12□□□□□ -0.79
SCAMP1-207ENST00000621999 LINC00311Q8N616 119 aa10.12□□□□□ -0.79
SCAMP1-207ENST00000621999 KIR3DL3Q8N743 410 aa10.12□□□□□ -0.79
SCAMP1-207ENST00000621999 LAMA5O15230 3695 aa10.11□□□□□ -0.79
SCAMP1-207ENST00000621999 WDFY3Q8IZQ1 3526 aa10.11□□□□□ -0.79
SCAMP1-207ENST00000621999 SRSF1Q07955 248 aaKnown RBP eCLIP10.11□□□□□ -0.79
SCAMP1-207ENST00000621999 EXOSC2Q13868 293 aaKnown RBP10.11□□□□□ -0.79
SCAMP1-207ENST00000621999 Q8N7P7 452 aa10.11□□□□□ -0.79
SCAMP1-207ENST00000621999 ZNF680Q8NEM1 530 aa10.11□□□□□ -0.79
SCAMP1-207ENST00000621999 OR2T6Q8NHC8 308 aa10.11□□□□□ -0.79
SCAMP1-207ENST00000621999 LYRM2Q9NU23 88 aaPredicted RBP10.11□□□□□ -0.79
SCAMP1-207ENST00000621999 CENPVL3A0A0U1RRI6 287 aa10.11□□□□□ -0.79
SCAMP1-207ENST00000621999 PLXNB1O43157 2135 aa10.11□□□□□ -0.79
SCAMP1-207ENST00000621999 IGHV3-23P01764 117 aa10.11□□□□□ -0.79
SCAMP1-207ENST00000621999 ZNF833PQ6ZTB9 187 aa10.11□□□□□ -0.79
SCAMP1-207ENST00000621999 LRTM2Q8N967 370 aa10.11□□□□□ -0.79
SCAMP1-207ENST00000621999 SCARB1Q8WTV0 552 aa10.11□□□□□ -0.79
SCAMP1-207ENST00000621999 J3QLI3 93 aa10.11□□□□□ -0.79
SCAMP1-207ENST00000621999 TCF23Q7RTU1 214 aa10.11□□□□□ -0.79
SCAMP1-207ENST00000621999 C9orf62Q8N4C0 152 aa10.11□□□□□ -0.79
SCAMP1-207ENST00000621999 C11orf44Q8N8P7 122 aa10.11□□□□□ -0.79
SCAMP1-207ENST00000621999 PSMG3-AS1Q96PY0 264 aa10.11□□□□□ -0.79
SCAMP1-207ENST00000621999 TBX15Q96SF7 602 aa10.11□□□□□ -0.79
SCAMP1-207ENST00000621999 TSPAN9O75954 239 aa10.1□□□□□ -0.79
SCAMP1-207ENST00000621999 HKR1P10072 659 aa10.1□□□□□ -0.79
SCAMP1-207ENST00000621999 PRSS8Q16651 343 aa10.1□□□□□ -0.79
SCAMP1-207ENST00000621999 C5orf64Q2M2E5 130 aa10.1□□□□□ -0.79
SCAMP1-207ENST00000621999 SMIM8Q96KF7 97 aa10.1□□□□□ -0.79
SCAMP1-207ENST00000621999 SLC25A22Q9H936 323 aa10.1□□□□□ -0.79
SCAMP1-207ENST00000621999 DEFA5Q01523 94 aa10.1□□□□□ -0.79
SCAMP1-207ENST00000621999 TEPPQ6URK8 271 aa10.1□□□□□ -0.79
SCAMP1-207ENST00000621999 BET1LQ9NYM9 111 aa10.1□□□□□ -0.79
SCAMP1-207ENST00000621999 SIGLEC9Q9Y336 463 aa10.1□□□□□ -0.79
SCAMP1-207ENST00000621999 MOB4Q9Y3A3 225 aa10.1□□□□□ -0.79
SCAMP1-207ENST00000621999 TEX50A0A1B0GTY4 177 aa10.1□□□□□ -0.79
SCAMP1-207ENST00000621999 TSPAN4O14817 238 aa10.1□□□□□ -0.79
SCAMP1-207ENST00000621999 TPPP2P59282 170 aa10.1□□□□□ -0.79
SCAMP1-207ENST00000621999 BPIFB3P59826 476 aa10.1□□□□□ -0.79
SCAMP1-207ENST00000621999 NMSQ5H8A3 153 aa10.1□□□□□ -0.79
SCAMP1-207ENST00000621999 LRRC75A-AS1Q8N1F1 130 aa10.1□□□□□ -0.79
SCAMP1-207ENST00000621999 OR5AN1Q8NGI8 311 aa10.1□□□□□ -0.79
SCAMP1-207ENST00000621999 OR4C12Q96R67 309 aa10.1□□□□□ -0.79
SCAMP1-207ENST00000621999 WNT10AQ9GZT5 417 aa10.1□□□□□ -0.79
SCAMP1-207ENST00000621999 NPVFQ9HCQ7 196 aa10.1□□□□□ -0.79
SCAMP1-207ENST00000621999 TRGV3P03979 118 aa10.1□□□□□ -0.79
SCAMP1-207ENST00000621999 MMP9P14780 707 aa10.1□□□□□ -0.79
SCAMP1-207ENST00000621999 S100A7P31151 101 aa10.1□□□□□ -0.79
SCAMP1-207ENST00000621999 CX3CL1P78423 397 aa10.1□□□□□ -0.79
SCAMP1-207ENST00000621999 OR1B1Q8NGR6 318 aa10.1□□□□□ -0.79
SCAMP1-207ENST00000621999 PRSS22Q9GZN4 317 aa10.1□□□□□ -0.79
SCAMP1-207ENST00000621999 ARV1Q9H2C2 271 aa10.1□□□□□ -0.79
SCAMP1-207ENST00000621999 TAS2R30P59541 319 aa10.09□□□□□ -0.79
SCAMP1-207ENST00000621999 NPIPB3Q92617 1050 aa10.09□□□□□ -0.79
SCAMP1-207ENST00000621999 ACTR3CQ9C0K3 210 aaPredicted RBP10.09□□□□□ -0.79
SCAMP1-207ENST00000621999 WNK1Q9H4A3 2382 aa10.09□□□□□ -0.79
SCAMP1-207ENST00000621999 IGSF23A1L1A6 192 aa10.09□□□□□ -0.79
SCAMP1-207ENST00000621999 ID3Q02535 119 aa10.09□□□□□ -0.79
SCAMP1-207ENST00000621999 TMEM177Q53S58 311 aa10.09□□□□□ -0.79
SCAMP1-207ENST00000621999 FAM120AOSQ5T036 256 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms