RNA–Protein interactions for RNA: ENST00000621870.4

GGA3-223, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best)

Gene GGA3, Length 4,034 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-223ENST00000621870 J3QKU1 62 aa7.73□□□□□ -1.17
GGA3-223ENST00000621870 LILRA1O75019 489 aa7.73□□□□□ -1.17
GGA3-223ENST00000621870 PITX3O75364 302 aa7.73□□□□□ -1.17
GGA3-223ENST00000621870 SRSF10O75494 262 aaKnown RBP7.73□□□□□ -1.17
GGA3-223ENST00000621870 CA2P00918 260 aa7.73□□□□□ -1.17
GGA3-223ENST00000621870 MGPP08493 103 aa7.73□□□□□ -1.17
GGA3-223ENST00000621870 H2BFSP57053 126 aa7.73□□□□□ -1.17
GGA3-223ENST00000621870 ADIPOQQ15848 244 aa7.73□□□□□ -1.17
GGA3-223ENST00000621870 OR4A47Q6IF82 309 aa7.73□□□□□ -1.17
GGA3-223ENST00000621870 PPP1R27Q86WC6 154 aa7.73□□□□□ -1.17
GGA3-223ENST00000621870 GBGT1Q8N5D6 347 aa7.73□□□□□ -1.17
GGA3-223ENST00000621870 EEF1AKMT3Q96AZ1 226 aa7.73□□□□□ -1.17
GGA3-223ENST00000621870 BPESC1Q9GZL8 116 aa7.73□□□□□ -1.17
GGA3-223ENST00000621870 FN1P02751 2386 aaKnown RBP7.72□□□□□ -1.17
GGA3-223ENST00000621870 HELZP42694 1942 aaKnown RBP7.72□□□□□ -1.17
GGA3-223ENST00000621870 TRAV20A0A0B4J274 112 aa7.72□□□□□ -1.17
GGA3-223ENST00000621870 IGHV3-66A0A0C4DH42 116 aa7.72□□□□□ -1.17
GGA3-223ENST00000621870 PSPNO60542 156 aa7.72□□□□□ -1.17
GGA3-223ENST00000621870 RPL7P18124 248 aaKnown RBP7.72□□□□□ -1.17
GGA3-223ENST00000621870 HIST1H3AP68431 136 aa7.72□□□□□ -1.17
GGA3-223ENST00000621870 FAM162BQ5T6X4 162 aa7.72□□□□□ -1.17
GGA3-223ENST00000621870 RNASEKQ6P5S7 137 aaKnown RBP7.72□□□□□ -1.17
GGA3-223ENST00000621870 BRD3OSQ6XYD6 125 aa7.72□□□□□ -1.17
GGA3-223ENST00000621870 COLCA1Q6ZS62 124 aa7.72□□□□□ -1.17
GGA3-223ENST00000621870 NUP37Q8NFH4 326 aa7.72□□□□□ -1.17
GGA3-223ENST00000621870 RAB24Q969Q5 203 aa7.72□□□□□ -1.17
GGA3-223ENST00000621870 IFT22Q9H7X7 185 aa7.72□□□□□ -1.17
GGA3-223ENST00000621870 TRAV30A0A087WSZ9 112 aa7.72□□□□□ -1.17
GGA3-223ENST00000621870 IGKV1D-13A0A0B4J2D9 117 aa7.72□□□□□ -1.17
GGA3-223ENST00000621870 TIMM23O14925 209 aa7.72□□□□□ -1.17
GGA3-223ENST00000621870 CFDP00746 253 aaPredicted RBP7.72□□□□□ -1.17
GGA3-223ENST00000621870 IGKV1-13P0DP09 117 aa7.72□□□□□ -1.17
GGA3-223ENST00000621870 WDR25Q64LD2 544 aaPredicted RBP7.72□□□□□ -1.17
GGA3-223ENST00000621870 ZNF705AQ6ZN79 300 aaPredicted RBP7.72□□□□□ -1.17
GGA3-223ENST00000621870 MARVELD3Q96A59 401 aa7.72□□□□□ -1.17
GGA3-223ENST00000621870 ISOC2Q96AB3 205 aa7.72□□□□□ -1.17
GGA3-223ENST00000621870 DYSFO75923 2080 aa7.72□□□□□ -1.17
GGA3-223ENST00000621870 A0A0G2JLM5 398 aa7.72□□□□□ -1.17
GGA3-223ENST00000621870 F8VVB4 439 aa7.72□□□□□ -1.17
GGA3-223ENST00000621870 F8VWA3 439 aa7.72□□□□□ -1.17
GGA3-223ENST00000621870 MMP9P14780 707 aa7.72□□□□□ -1.17
GGA3-223ENST00000621870 CCL1P22362 96 aa7.72□□□□□ -1.17
GGA3-223ENST00000621870 ZNF146Q15072 292 aa7.72□□□□□ -1.17
GGA3-223ENST00000621870 IGFL3Q6UXB1 125 aa7.72□□□□□ -1.17
GGA3-223ENST00000621870 H1FOOQ8IZA3 346 aaPredicted RBP7.72□□□□□ -1.17
GGA3-223ENST00000621870 ZNF525Q8N782 197 aa7.72□□□□□ -1.17
GGA3-223ENST00000621870 ARPC1AQ92747 370 aa7.72□□□□□ -1.17
GGA3-223ENST00000621870 IL22RA2Q969J5 263 aa7.72□□□□□ -1.17
GGA3-223ENST00000621870 C21orf62Q9NYP8 219 aa7.72□□□□□ -1.17
GGA3-223ENST00000621870 ARL2-SNX15V9GYD0 113 aa7.72□□□□□ -1.17
GGA3-223ENST00000621870 SAA2-SAA4A0A096LPE2 208 aa7.71□□□□□ -1.17
GGA3-223ENST00000621870 K7EM74 188 aa7.71□□□□□ -1.17
GGA3-223ENST00000621870 TCAPO15273 167 aa7.71□□□□□ -1.17
GGA3-223ENST00000621870 SAA2P0DJI9 122 aaPredicted RBP7.71□□□□□ -1.17
GGA3-223ENST00000621870 UCP1P25874 307 aa7.71□□□□□ -1.17
GGA3-223ENST00000621870 DMRTA2Q96SC8 542 aa7.71□□□□□ -1.17
GGA3-223ENST00000621870 SLC2A8Q9NY64 477 aa7.71□□□□□ -1.17
GGA3-223ENST00000621870 NAT8Q9UHE5 227 aa7.71□□□□□ -1.17
GGA3-223ENST00000621870 OR2T8A6NH00 312 aa7.71□□□□□ -1.18
GGA3-223ENST00000621870 B4DSR2 109 aa7.71□□□□□ -1.18
GGA3-223ENST00000621870 TMEM178BH3BS89 294 aa7.71□□□□□ -1.18
GGA3-223ENST00000621870 TGOLN2O43493 480 aa7.71□□□□□ -1.18
GGA3-223ENST00000621870 WISP1O95388 367 aa7.71□□□□□ -1.18
GGA3-223ENST00000621870 ACAA1P09110 424 aaPredicted RBP7.71□□□□□ -1.18
GGA3-223ENST00000621870 G0S2P27469 103 aa7.71□□□□□ -1.18
GGA3-223ENST00000621870 MORN2Q502X0 79 aa7.71□□□□□ -1.18
GGA3-223ENST00000621870 RTN4RL2Q86UN3 420 aa7.71□□□□□ -1.18
GGA3-223ENST00000621870 VOPP1Q96AW1 172 aa7.71□□□□□ -1.18
GGA3-223ENST00000621870 TMEM18Q96B42 140 aa7.71□□□□□ -1.18
GGA3-223ENST00000621870 FAM210BQ96KR6 192 aa7.71□□□□□ -1.18
GGA3-223ENST00000621870 NABP2Q9BQ15 211 aa7.71□□□□□ -1.18
GGA3-223ENST00000621870 LYRM2Q9NU23 88 aaPredicted RBP7.71□□□□□ -1.18
GGA3-223ENST00000621870 FOXA2Q9Y261 457 aaPredicted RBP7.71□□□□□ -1.18
GGA3-223ENST00000621870 NDUFB4O95168 129 aa7.71□□□□□ -1.18
GGA3-223ENST00000621870 C8orf88P0DMB2 117 aa7.71□□□□□ -1.18
GGA3-223ENST00000621870 CXCL2P19875 107 aa7.71□□□□□ -1.18
GGA3-223ENST00000621870 TMEM219Q86XT9 240 aa7.71□□□□□ -1.18
GGA3-223ENST00000621870 SRSF12Q8WXF0 261 aaKnown RBP7.71□□□□□ -1.18
GGA3-223ENST00000621870 SLC25A33Q9BSK2 321 aa7.71□□□□□ -1.18
GGA3-223ENST00000621870 MTORP42345 2549 aa7.7□□□□□ -1.18
GGA3-223ENST00000621870 E7EQL1 145 aa7.7□□□□□ -1.18
GGA3-223ENST00000621870 NBR2O15453 112 aa7.7□□□□□ -1.18
GGA3-223ENST00000621870 YPEL1O60688 119 aa7.7□□□□□ -1.18
GGA3-223ENST00000621870 RELQ04864 619 aaPredicted RBP7.7□□□□□ -1.18
GGA3-223ENST00000621870 CLEC19AQ6UXS0 136 aa7.7□□□□□ -1.18
GGA3-223ENST00000621870 YPEL2Q96QA6 119 aa7.7□□□□□ -1.18
GGA3-223ENST00000621870 PRSS22Q9GZN4 317 aa7.7□□□□□ -1.18
GGA3-223ENST00000621870 PROK2Q9HC23 129 aa7.7□□□□□ -1.18
GGA3-223ENST00000621870 TRBV6-7A0A0A0MS04 114 aa7.7□□□□□ -1.18
GGA3-223ENST00000621870 TMEM218A2RU14 115 aa7.7□□□□□ -1.18
GGA3-223ENST00000621870 RRHO14718 337 aa7.7□□□□□ -1.18
GGA3-223ENST00000621870 PRB1P04280 392 aa7.7□□□□□ -1.18
GGA3-223ENST00000621870 SAA1P0DJI8 122 aaPredicted RBP7.7□□□□□ -1.18
GGA3-223ENST00000621870 HGFACQ04756 655 aa7.7□□□□□ -1.18
GGA3-223ENST00000621870 PNRC1Q12796 327 aaPredicted RBP7.7□□□□□ -1.18
GGA3-223ENST00000621870 KLRD1Q13241 179 aa7.7□□□□□ -1.18
GGA3-223ENST00000621870 RRN3P1Q2M238 152 aa7.7□□□□□ -1.18
GGA3-223ENST00000621870 AWAT1Q58HT5 328 aa7.7□□□□□ -1.18
GGA3-223ENST00000621870 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.7□□□□□ -1.18
GGA3-223ENST00000621870 TANC1Q9C0D5 1861 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms