RNA–Protein interactions for RNA: ENST00000621747.5

VEGFA-229, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-229ENST00000621747 GDPD1Q8N9F7 314 aa19.09■□□□□ 0.65
VEGFA-229ENST00000621747 TUBA4BQ9H853 241 aa19.09■□□□□ 0.65
VEGFA-229ENST00000621747 TECRQ9NZ01 308 aaKnown RBP19.09■□□□□ 0.65
VEGFA-229ENST00000621747 OR51B2Q9Y5P1 312 aa19.09■□□□□ 0.65
VEGFA-229ENST00000621747 CLEC3BP05452 202 aa19.08■□□□□ 0.64
VEGFA-229ENST00000621747 SERPINE2P07093 398 aa19.08■□□□□ 0.64
VEGFA-229ENST00000621747 OR13C7P0DN81 318 aa19.08■□□□□ 0.64
VEGFA-229ENST00000621747 DEFB114Q30KQ6 69 aa19.08■□□□□ 0.64
VEGFA-229ENST00000621747 TBC1D26Q86UD7 250 aa19.08■□□□□ 0.64
VEGFA-229ENST00000621747 LSM10Q969L4 123 aaKnown RBP19.08■□□□□ 0.64
VEGFA-229ENST00000621747 TSC22D3Q99576 134 aa19.08■□□□□ 0.64
VEGFA-229ENST00000621747 TM2D3Q9BRN9 247 aa19.08■□□□□ 0.64
VEGFA-229ENST00000621747 HINT2Q9BX68 163 aa19.08■□□□□ 0.64
VEGFA-229ENST00000621747 NDUFA4L2Q9NRX3 87 aa19.08■□□□□ 0.64
VEGFA-229ENST00000621747 FKBP11Q9NYL4 201 aa19.08■□□□□ 0.64
VEGFA-229ENST00000621747 EXTL2Q9UBQ6 330 aa19.08■□□□□ 0.64
VEGFA-229ENST00000621747 PRNDQ9UKY0 176 aa19.08■□□□□ 0.64
VEGFA-229ENST00000621747 ZNF320A2RRD8 509 aa19.07■□□□□ 0.64
VEGFA-229ENST00000621747 IFNA6P05013 189 aa19.07■□□□□ 0.64
VEGFA-229ENST00000621747 PTBP1P26599 531 aaKnown RBP eCLIP19.07■□□□□ 0.64
VEGFA-229ENST00000621747 WT1-ASQ06250 92 aa19.07■□□□□ 0.64
VEGFA-229ENST00000621747 GPR141Q7Z602 305 aa19.07■□□□□ 0.64
VEGFA-229ENST00000621747 ZNF502Q8TBZ5 544 aa19.07■□□□□ 0.64
VEGFA-229ENST00000621747 C15orf40Q8WUR7 153 aa19.07■□□□□ 0.64
VEGFA-229ENST00000621747 SLC2A8Q9NY64 477 aa19.07■□□□□ 0.64
VEGFA-229ENST00000621747 NSG2Q9Y328 171 aa19.07■□□□□ 0.64
VEGFA-229ENST00000621747 C3orf84H3BNL1 204 aa19.06■□□□□ 0.64
VEGFA-229ENST00000621747 M0QYG6 137 aa19.06■□□□□ 0.64
VEGFA-229ENST00000621747 TPPPO94811 219 aa19.06■□□□□ 0.64
VEGFA-229ENST00000621747 GPR183P32249 361 aa19.06■□□□□ 0.64
VEGFA-229ENST00000621747 CD81P60033 236 aa19.06■□□□□ 0.64
VEGFA-229ENST00000621747 RNASE12Q5GAN4 147 aaKnown RBP19.06■□□□□ 0.64
VEGFA-229ENST00000621747 SLC25A24Q6NUK1 477 aa19.06■□□□□ 0.64
VEGFA-229ENST00000621747 OR5B3Q8NH48 314 aa19.06■□□□□ 0.64
VEGFA-229ENST00000621747 VN1R17PQ8TDU5 208 aa19.06■□□□□ 0.64
VEGFA-229ENST00000621747 A8MWP6 167 aa19.05■□□□□ 0.64
VEGFA-229ENST00000621747 CBLN1P23435 193 aa19.05■□□□□ 0.64
VEGFA-229ENST00000621747 RNASE10Q5GAN6 216 aaKnown RBP19.05■□□□□ 0.64
VEGFA-229ENST00000621747 TMEM56Q96MV1 263 aa19.05■□□□□ 0.64
VEGFA-229ENST00000621747 ZC4H2Q9NQZ6 224 aa19.05■□□□□ 0.64
VEGFA-229ENST00000621747 KLK11Q9UBX7 282 aa19.05■□□□□ 0.64
VEGFA-229ENST00000621747 F11RQ9Y624 299 aaKnown RBP19.05■□□□□ 0.64
VEGFA-229ENST00000621747 ZNF785A8K8V0 405 aa19.04■□□□□ 0.64
VEGFA-229ENST00000621747 TBPP20226 339 aa19.04■□□□□ 0.64
VEGFA-229ENST00000621747 EDN2P20800 178 aa19.04■□□□□ 0.64
VEGFA-229ENST00000621747 PLET1Q6UQ28 207 aa19.04■□□□□ 0.64
VEGFA-229ENST00000621747 OR52I2Q8NH67 350 aa19.04■□□□□ 0.64
VEGFA-229ENST00000621747 NEURL2Q9BR09 285 aa19.04■□□□□ 0.64
VEGFA-229ENST00000621747 PALMDQ9NP74 551 aa19.04■□□□□ 0.64
VEGFA-229ENST00000621747 TMEM213A2RRL7 107 aa19.03■□□□□ 0.64
VEGFA-229ENST00000621747 C15orf61A6NNL5 157 aa19.03■□□□□ 0.64
VEGFA-229ENST00000621747 PGAM2P15259 253 aa19.03■□□□□ 0.64
VEGFA-229ENST00000621747 ALDH3B2P48448 385 aa19.03■□□□□ 0.64
VEGFA-229ENST00000621747 GUCA2BQ16661 112 aa19.03■□□□□ 0.64
VEGFA-229ENST00000621747 ARRDC1Q8N5I2 433 aa19.03■□□□□ 0.64
VEGFA-229ENST00000621747 OR1L6Q8NGR2 347 aa19.03■□□□□ 0.64
VEGFA-229ENST00000621747 CACNG8Q8WXS5 425 aa19.03■□□□□ 0.64
VEGFA-229ENST00000621747 ZNF486Q96H40 463 aaPredicted RBP19.03■□□□□ 0.64
VEGFA-229ENST00000621747 TMEM14BQ9NUH8 114 aa19.03■□□□□ 0.64
VEGFA-229ENST00000621747 MTFP1Q9UDX5 166 aa19.03■□□□□ 0.64
VEGFA-229ENST00000621747 TENM3Q9P273 2699 aa19.03■□□□□ 0.64
VEGFA-229ENST00000621747 CD3DP04234 171 aa19.02■□□□□ 0.64
VEGFA-229ENST00000621747 HAGHQ16775 308 aa19.02■□□□□ 0.64
VEGFA-229ENST00000621747 H2BFWTQ7Z2G1 175 aa19.02■□□□□ 0.64
VEGFA-229ENST00000621747 OR4A16Q8NH70 328 aa19.02■□□□□ 0.64
VEGFA-229ENST00000621747 MUC7Q8TAX7 377 aa19.02■□□□□ 0.64
VEGFA-229ENST00000621747 SEC22AQ96IW7 307 aa19.02■□□□□ 0.64
VEGFA-229ENST00000621747 ABHD1Q96SE0 405 aa19.02■□□□□ 0.64
VEGFA-229ENST00000621747 SPATA25Q9BR10 227 aa19.02■□□□□ 0.64
VEGFA-229ENST00000621747 PLEKHA3Q9HB20 300 aa19.02■□□□□ 0.64
VEGFA-229ENST00000621747 RGS5O15539 181 aa19.01■□□□□ 0.63
VEGFA-229ENST00000621747 TGOLN2O43493 480 aa19.01■□□□□ 0.63
VEGFA-229ENST00000621747 RND3P61587 244 aa19.01■□□□□ 0.63
VEGFA-229ENST00000621747 ZNF57Q68EA5 555 aaPredicted RBP19.01■□□□□ 0.63
VEGFA-229ENST00000621747 UXS1Q8NBZ7 420 aa19.01■□□□□ 0.63
VEGFA-229ENST00000621747 MARC2Q969Z3 335 aa19.01■□□□□ 0.63
VEGFA-229ENST00000621747 WDR89Q96FK6 387 aaPredicted RBP19.01■□□□□ 0.63
VEGFA-229ENST00000621747 UFC1Q9Y3C8 167 aa19.01■□□□□ 0.63
VEGFA-229ENST00000621747 KMT2CQ8NEZ4 4911 aaKnown RBP19.01■□□□□ 0.63
VEGFA-229ENST00000621747 UNQ9165/PRO28630Q6UXU0 137 aa19■□□□□ 0.63
VEGFA-229ENST00000621747 LHFPL1Q86WI0 220 aa19■□□□□ 0.63
VEGFA-229ENST00000621747 MRGPRFQ96AM1 343 aa19■□□□□ 0.63
VEGFA-229ENST00000621747 BSCL2Q96G97 398 aaPredicted RBP19■□□□□ 0.63
VEGFA-229ENST00000621747 ATP6V0BQ99437 205 aa19■□□□□ 0.63
VEGFA-229ENST00000621747 ZNF436Q9C0F3 470 aaPredicted RBP19■□□□□ 0.63
VEGFA-229ENST00000621747 OR2T8A6NH00 312 aa18.99■□□□□ 0.63
VEGFA-229ENST00000621747 DBX1A6NMT0 343 aa18.99■□□□□ 0.63
VEGFA-229ENST00000621747 IGKV1-39P01597 117 aa18.99■□□□□ 0.63
VEGFA-229ENST00000621747 IGKV1D-39P04432 117 aa18.99■□□□□ 0.63
VEGFA-229ENST00000621747 CD7P09564 240 aa18.99■□□□□ 0.63
VEGFA-229ENST00000621747 MFAP2P55001 183 aa18.99■□□□□ 0.63
VEGFA-229ENST00000621747 ELLP55199 621 aaPredicted RBP18.99■□□□□ 0.63
VEGFA-229ENST00000621747 TAS2R19P59542 299 aa18.99■□□□□ 0.63
VEGFA-229ENST00000621747 TM4SF20Q53R12 229 aa18.99■□□□□ 0.63
VEGFA-229ENST00000621747 SPSB3Q6PJ21 355 aa18.99■□□□□ 0.63
VEGFA-229ENST00000621747 TMEM229BQ8NBD8 167 aa18.99■□□□□ 0.63
VEGFA-229ENST00000621747 CITED4Q96RK1 184 aa18.99■□□□□ 0.63
VEGFA-229ENST00000621747 C21orf62Q9NYP8 219 aa18.99■□□□□ 0.63
VEGFA-229ENST00000621747 MLXQ9UH92 298 aa18.99■□□□□ 0.63
VEGFA-229ENST00000621747 IGHV3-35A0A0C4DH35 117 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms