RNA–Protein interactions for RNA: ENST00000621266.4

COL4A6-210, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,627 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-210ENST00000621266 CYP2G1PQ6ZSU1 146 aa8.42□□□□□ -1.06
COL4A6-210ENST00000621266 LHFPL4Q7Z7J7 247 aa8.42□□□□□ -1.06
COL4A6-210ENST00000621266 ARFGEF1Q9Y6D6 1849 aa8.42□□□□□ -1.06
COL4A6-210ENST00000621266 IGHV3-66A0A0C4DH42 116 aa8.42□□□□□ -1.06
COL4A6-210ENST00000621266 CELA2AP08217 269 aa8.42□□□□□ -1.06
COL4A6-210ENST00000621266 NPIPB3Q92617 1050 aa8.42□□□□□ -1.06
COL4A6-210ENST00000621266 IGHV3-35A0A0C4DH35 117 aa8.42□□□□□ -1.06
COL4A6-210ENST00000621266 A0A0G2JLM5 398 aa8.42□□□□□ -1.06
COL4A6-210ENST00000621266 A0A1B0GUT8 65 aa8.42□□□□□ -1.06
COL4A6-210ENST00000621266 HIGD1CA8MV81 97 aa8.42□□□□□ -1.06
COL4A6-210ENST00000621266 FAM90A26D6RGX4 464 aa8.42□□□□□ -1.06
COL4A6-210ENST00000621266 WNT9BO14905 357 aa8.42□□□□□ -1.06
COL4A6-210ENST00000621266 MESP2Q0VG99 397 aa8.42□□□□□ -1.06
COL4A6-210ENST00000621266 CSRP2Q16527 193 aa8.42□□□□□ -1.06
COL4A6-210ENST00000621266 PIN1P1O15428 100 aa8.42□□□□□ -1.06
COL4A6-210ENST00000621266 DCAF10Q5QP82 559 aa8.42□□□□□ -1.06
COL4A6-210ENST00000621266 HIST3H2BBQ8N257 126 aa8.42□□□□□ -1.06
COL4A6-210ENST00000621266 PCM1Q15154 2024 aa8.42□□□□□ -1.06
COL4A6-210ENST00000621266 BRWD1Q9NSI6 2320 aa8.42□□□□□ -1.06
COL4A6-210ENST00000621266 hCG_38984A0A1B0GV85 526 aa8.42□□□□□ -1.06
COL4A6-210ENST00000621266 FAM159AQ6UWV7 190 aa8.42□□□□□ -1.06
COL4A6-210ENST00000621266 COQ2Q96H96 371 aa8.42□□□□□ -1.06
COL4A6-210ENST00000621266 A0A1W2PS18 150 aa8.41□□□□□ -1.06
COL4A6-210ENST00000621266 PF4V1P10720 104 aa8.41□□□□□ -1.06
COL4A6-210ENST00000621266 HSPE1P61604 102 aaKnown RBP8.41□□□□□ -1.06
COL4A6-210ENST00000621266 ZNF646O15015 1829 aaPredicted RBP8.41□□□□□ -1.06
COL4A6-210ENST00000621266 TNFSF13O75888 250 aa8.41□□□□□ -1.06
COL4A6-210ENST00000621266 IGHV3-23P01764 117 aa8.41□□□□□ -1.06
COL4A6-210ENST00000621266 C1QTNF9P0C862 333 aa8.41□□□□□ -1.06
COL4A6-210ENST00000621266 CA7P43166 264 aa8.41□□□□□ -1.06
COL4A6-210ENST00000621266 NPC2P61916 151 aa8.41□□□□□ -1.06
COL4A6-210ENST00000621266 ZNF826PQ6ZT77 177 aa8.41□□□□□ -1.06
COL4A6-210ENST00000621266 LRTM2Q8N967 370 aa8.41□□□□□ -1.06
COL4A6-210ENST00000621266 LSM4Q9Y4Z0 139 aaKnown RBP8.41□□□□□ -1.06
COL4A6-210ENST00000621266 C1QL4Q86Z23 238 aa8.41□□□□□ -1.06
COL4A6-210ENST00000621266 TMEM186Q96B77 213 aa8.41□□□□□ -1.06
COL4A6-210ENST00000621266 DTX4Q9Y2E6 619 aa8.41□□□□□ -1.06
COL4A6-210ENST00000621266 IGHV3-64A0A075B6Q5 118 aa8.41□□□□□ -1.06
COL4A6-210ENST00000621266 IGHV3OR16-13A0A075B7E8 117 aa8.41□□□□□ -1.06
COL4A6-210ENST00000621266 IGHV3-74A0A0B4J1X5 117 aa8.41□□□□□ -1.06
COL4A6-210ENST00000621266 H3BRM9 83 aa8.41□□□□□ -1.06
COL4A6-210ENST00000621266 SLC25A2Q9BXI2 301 aa8.41□□□□□ -1.06
COL4A6-210ENST00000621266 TUBA4BQ9H853 241 aa8.41□□□□□ -1.06
COL4A6-210ENST00000621266 CALYQ9NYX4 217 aa8.41□□□□□ -1.06
COL4A6-210ENST00000621266 TNFRSF18Q9Y5U5 241 aa8.41□□□□□ -1.06
COL4A6-210ENST00000621266 RBBP6Q7Z6E9 1792 aaKnown RBP8.41□□□□□ -1.06
COL4A6-210ENST00000621266 ZFP36L2P47974 494 aaKnown RBP8.41□□□□□ -1.06
COL4A6-210ENST00000621266 PSG4Q00888 419 aa8.41□□□□□ -1.06
COL4A6-210ENST00000621266 ORMDL3Q8N138 153 aa8.41□□□□□ -1.06
COL4A6-210ENST00000621266 TRAV14DV4A0A0A6YYC5 116 aa8.4□□□□□ -1.06
COL4A6-210ENST00000621266 FAM181AQ8N9Y4 354 aa8.4□□□□□ -1.06
COL4A6-210ENST00000621266 CRIM1Q9NZV1 1036 aa8.4□□□□□ -1.06
COL4A6-210ENST00000621266 TCF19Q9Y242 345 aa8.4□□□□□ -1.06
COL4A6-210ENST00000621266 NPIPB4C9JG80 1138 aa8.4□□□□□ -1.06
COL4A6-210ENST00000621266 UPK3AO75631 287 aa8.4□□□□□ -1.06
COL4A6-210ENST00000621266 AMBPP02760 352 aa8.4□□□□□ -1.06
COL4A6-210ENST00000621266 SEC11AP67812 179 aa8.4□□□□□ -1.06
COL4A6-210ENST00000621266 HSD52Q0P140 79 aa8.4□□□□□ -1.06
COL4A6-210ENST00000621266 SF3B6Q9Y3B4 125 aaKnown RBP8.4□□□□□ -1.06
COL4A6-210ENST00000621266 LRRC37AA6NMS7 1700 aa8.4□□□□□ -1.06
COL4A6-210ENST00000621266 DPM2O94777 84 aa8.4□□□□□ -1.06
COL4A6-210ENST00000621266 CCL3P10147 92 aa8.4□□□□□ -1.06
COL4A6-210ENST00000621266 GPX4P36969 197 aaPredicted RBP8.4□□□□□ -1.06
COL4A6-210ENST00000621266 MRPL52Q86TS9 123 aaKnown RBP8.4□□□□□ -1.06
COL4A6-210ENST00000621266 NR2C2APQ86WQ0 139 aa8.4□□□□□ -1.06
COL4A6-210ENST00000621266 FBLIM1Q8WUP2 373 aa8.4□□□□□ -1.06
COL4A6-210ENST00000621266 ST20Q9HBF5 79 aa8.4□□□□□ -1.06
COL4A6-210ENST00000621266 TRBV5-7A0A0A0MS05 114 aa8.4□□□□□ -1.06
COL4A6-210ENST00000621266 ODAMA1E959 279 aa8.4□□□□□ -1.06
COL4A6-210ENST00000621266 CEACAM4O75871 244 aa8.4□□□□□ -1.06
COL4A6-210ENST00000621266 IGKV1D-16P01601 117 aa8.4□□□□□ -1.06
COL4A6-210ENST00000621266 UBE2V1Q13404 147 aa8.4□□□□□ -1.06
COL4A6-210ENST00000621266 CD200R1LQ6Q8B3 271 aa8.4□□□□□ -1.06
COL4A6-210ENST00000621266 TRPM6Q9BX84 2022 aa8.4□□□□□ -1.07
COL4A6-210ENST00000621266 RNF222A6NCQ9 220 aa8.4□□□□□ -1.07
COL4A6-210ENST00000621266 THY1P04216 161 aa8.4□□□□□ -1.07
COL4A6-210ENST00000621266 IGFBP2P18065 325 aa8.4□□□□□ -1.07
COL4A6-210ENST00000621266 G6PC2Q9NQR9 355 aa8.4□□□□□ -1.07
COL4A6-210ENST00000621266 GZMBP10144 247 aa8.39□□□□□ -1.07
COL4A6-210ENST00000621266 PRR31Q5SQ13 230 aa8.39□□□□□ -1.07
COL4A6-210ENST00000621266 PCSK4Q6UW60 755 aa8.39□□□□□ -1.07
COL4A6-210ENST00000621266 HEPN1Q6WQI6 88 aa8.39□□□□□ -1.07
COL4A6-210ENST00000621266 MARS2Q96GW9 593 aaKnown RBP8.39□□□□□ -1.07
COL4A6-210ENST00000621266 C19orf24Q9BVV8 132 aa8.39□□□□□ -1.07
COL4A6-210ENST00000621266 DLL3Q9NYJ7 618 aa8.39□□□□□ -1.07
COL4A6-210ENST00000621266 A0A087X0K7 114 aa8.39□□□□□ -1.07
COL4A6-210ENST00000621266 CXCL1P09341 107 aa8.39□□□□□ -1.07
COL4A6-210ENST00000621266 CCL8P80075 99 aa8.39□□□□□ -1.07
COL4A6-210ENST00000621266 ATXN8Q156A1 80 aa8.39□□□□□ -1.07
COL4A6-210ENST00000621266 S4R3C0 116 aa8.39□□□□□ -1.07
COL4A6-210ENST00000621266 A0A0U1RRA0 63 aa8.39□□□□□ -1.07
COL4A6-210ENST00000621266 IGKCP01834 107 aa8.39□□□□□ -1.07
COL4A6-210ENST00000621266 CLEC2AQ6UVW9 174 aa8.39□□□□□ -1.07
COL4A6-210ENST00000621266 DMRTC2Q8IXT2 367 aaPredicted RBP8.39□□□□□ -1.07
COL4A6-210ENST00000621266 PHLDA1Q8WV24 401 aaPredicted RBP8.39□□□□□ -1.07
COL4A6-210ENST00000621266 WFDC6Q9BQY6 131 aa8.39□□□□□ -1.07
COL4A6-210ENST00000621266 TTTY12Q9BZ98 90 aa8.39□□□□□ -1.07
COL4A6-210ENST00000621266 NUP214P35658 2090 aaPredicted RBP8.39□□□□□ -1.07
COL4A6-210ENST00000621266 EVI2AP22794 236 aa8.39□□□□□ -1.07
COL4A6-210ENST00000621266 PEBP1P30086 187 aaKnown RBP8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 149.7 ms