RNA–Protein interactions for RNA: ENST00000620864.1

COLCA1-205, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene COLCA1, Length 8,098 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-205ENST00000620864 FAM27BQ5VT28 67 aa6.14□□□□□ -1.43
COLCA1-205ENST00000620864 NPCDR1Q9BY65 106 aa6.14□□□□□ -1.43
COLCA1-205ENST00000620864 PGLYRP1O75594 196 aaPredicted RBP6.14□□□□□ -1.43
COLCA1-205ENST00000620864 TNFRSF6BO95407 300 aa6.14□□□□□ -1.43
COLCA1-205ENST00000620864 INAFM2P0DMQ5 153 aa6.14□□□□□ -1.43
COLCA1-205ENST00000620864 RTN4RL2Q86UN3 420 aa6.14□□□□□ -1.43
COLCA1-205ENST00000620864 FGFRL1Q8N441 504 aa6.14□□□□□ -1.43
COLCA1-205ENST00000620864 CACNG8Q8WXS5 425 aa6.14□□□□□ -1.43
COLCA1-205ENST00000620864 ASCL2Q99929 193 aa6.14□□□□□ -1.43
COLCA1-205ENST00000620864 NABP2Q9BQ15 211 aa6.14□□□□□ -1.43
COLCA1-205ENST00000620864 HEATR1Q9H583 2144 aaKnown RBP6.14□□□□□ -1.43
COLCA1-205ENST00000620864 VWC2LB2RUY7 222 aa6.14□□□□□ -1.43
COLCA1-205ENST00000620864 PPIAL4DF5H284 164 aa6.14□□□□□ -1.43
COLCA1-205ENST00000620864 CD160O95971 181 aa6.14□□□□□ -1.43
COLCA1-205ENST00000620864 SSTR5P35346 364 aa6.14□□□□□ -1.43
COLCA1-205ENST00000620864 FXYD3Q14802 87 aa6.14□□□□□ -1.43
COLCA1-205ENST00000620864 Q6ZNB5 142 aa6.14□□□□□ -1.43
COLCA1-205ENST00000620864 CENPVQ7Z7K6 275 aaPredicted RBP6.14□□□□□ -1.43
COLCA1-205ENST00000620864 TMEM186Q96B77 213 aa6.14□□□□□ -1.43
COLCA1-205ENST00000620864 WDR54Q9H977 334 aa6.14□□□□□ -1.43
COLCA1-205ENST00000620864 SDF2L1Q9HCN8 221 aa6.14□□□□□ -1.43
COLCA1-205ENST00000620864 XIRP1Q702N8 1843 aaKnown RBP6.14□□□□□ -1.43
COLCA1-205ENST00000620864 CDK2AP2O75956 126 aa6.13□□□□□ -1.43
COLCA1-205ENST00000620864 SRP19P09132 144 aaKnown RBP6.13□□□□□ -1.43
COLCA1-205ENST00000620864 OSTCQ9NRP0 149 aa6.13□□□□□ -1.43
COLCA1-205ENST00000620864 CCL27Q9Y4X3 112 aa6.13□□□□□ -1.43
COLCA1-205ENST00000620864 CHD3Q12873 2000 aaKnown RBP6.13□□□□□ -1.43
COLCA1-205ENST00000620864 SPTBN2O15020 2390 aa6.13□□□□□ -1.43
COLCA1-205ENST00000620864 IGKV3D-15A0A087WSY6 115 aa6.13□□□□□ -1.43
COLCA1-205ENST00000620864 A0A0G2JMM0 328 aa6.13□□□□□ -1.43
COLCA1-205ENST00000620864 A0A1W2PPB8 328 aa6.13□□□□□ -1.43
COLCA1-205ENST00000620864 KIR3DP1A8MWS1 328 aa6.13□□□□□ -1.43
COLCA1-205ENST00000620864 IGKV3-15P01624 115 aa6.13□□□□□ -1.43
COLCA1-205ENST00000620864 KRTCAP3Q53RY4 240 aa6.13□□□□□ -1.43
COLCA1-205ENST00000620864 DTX1Q86Y01 620 aa6.13□□□□□ -1.43
COLCA1-205ENST00000620864 ZNF488Q96MN9 340 aa6.13□□□□□ -1.43
COLCA1-205ENST00000620864 NPPCP23582 126 aa6.13□□□□□ -1.43
COLCA1-205ENST00000620864 C1orf194Q5T5A4 169 aa6.13□□□□□ -1.43
COLCA1-205ENST00000620864 PRR13Q9NZ81 148 aa6.13□□□□□ -1.43
COLCA1-205ENST00000620864 WNK3Q9BYP7 1800 aa6.13□□□□□ -1.43
COLCA1-205ENST00000620864 AHCTF1Q8WYP5 2266 aa6.13□□□□□ -1.43
COLCA1-205ENST00000620864 A0A0G2JLM5 398 aa6.13□□□□□ -1.43
COLCA1-205ENST00000620864 IGKCP01834 107 aa6.13□□□□□ -1.43
COLCA1-205ENST00000620864 ZIC1Q15915 447 aa6.13□□□□□ -1.43
COLCA1-205ENST00000620864 MRPS18BQ9Y676 258 aaKnown RBP6.13□□□□□ -1.43
COLCA1-205ENST00000620864 WDR90Q96KV7 1748 aa6.13□□□□□ -1.43
COLCA1-205ENST00000620864 BGLAPP02818 100 aa6.13□□□□□ -1.43
COLCA1-205ENST00000620864 ARPC1AQ92747 370 aa6.13□□□□□ -1.43
COLCA1-205ENST00000620864 RTN4RQ9BZR6 473 aa6.13□□□□□ -1.43
COLCA1-205ENST00000620864 PLXNB2O15031 1838 aa6.13□□□□□ -1.43
COLCA1-205ENST00000620864 SHISA8B8ZZ34 492 aa6.13□□□□□ -1.43
COLCA1-205ENST00000620864 ATP5G2Q06055 141 aa6.13□□□□□ -1.43
COLCA1-205ENST00000620864 TPTE2P1Q5T6R2 138 aa6.13□□□□□ -1.43
COLCA1-205ENST00000620864 C9orf153Q5TBE3 101 aa6.13□□□□□ -1.43
COLCA1-205ENST00000620864 PPIAL4EA0A075B759 164 aa6.12□□□□□ -1.43
COLCA1-205ENST00000620864 IGHV1OR21-1A0A087WYE8 117 aa6.12□□□□□ -1.43
COLCA1-205ENST00000620864 IGHV1-69-2A0A0G2JMI3 117 aa6.12□□□□□ -1.43
COLCA1-205ENST00000620864 hCG_38984A0A1B0GV85 526 aa6.12□□□□□ -1.43
COLCA1-205ENST00000620864 NDUFC2O95298 119 aa6.12□□□□□ -1.43
COLCA1-205ENST00000620864 IGHV4-39P01824 125 aa6.12□□□□□ -1.43
COLCA1-205ENST00000620864 PPIAL4FP0DN26 164 aa6.12□□□□□ -1.43
COLCA1-205ENST00000620864 ZNF114Q8NC26 417 aa6.12□□□□□ -1.43
COLCA1-205ENST00000620864 RNASEH2CQ8TDP1 164 aaKnown RBP6.12□□□□□ -1.43
COLCA1-205ENST00000620864 PLEKHB2Q96CS7 222 aa6.12□□□□□ -1.43
COLCA1-205ENST00000620864 SPSB2Q99619 263 aa6.12□□□□□ -1.43
COLCA1-205ENST00000620864 TMEM74BQ9NUR3 256 aa6.12□□□□□ -1.43
COLCA1-205ENST00000620864 KLF12Q9Y4X4 402 aa6.12□□□□□ -1.43
COLCA1-205ENST00000620864 PPIAL4AQ9Y536 164 aa6.12□□□□□ -1.43
COLCA1-205ENST00000620864 HS3ST3B1Q9Y662 390 aa6.12□□□□□ -1.43
COLCA1-205ENST00000620864 TRBV5-3A0A0A0MS03 114 aa6.12□□□□□ -1.43
COLCA1-205ENST00000620864 TRAV5A0A0B4J249 113 aa6.12□□□□□ -1.43
COLCA1-205ENST00000620864 F2Z2F3 143 aa6.12□□□□□ -1.43
COLCA1-205ENST00000620864 OR9G9P0C7N8 305 aa6.12□□□□□ -1.43
COLCA1-205ENST00000620864 APELAP0DMC3 54 aa6.12□□□□□ -1.43
COLCA1-205ENST00000620864 PGFP49763 221 aa6.12□□□□□ -1.43
COLCA1-205ENST00000620864 UCP2P55851 309 aa6.12□□□□□ -1.43
COLCA1-205ENST00000620864 NSUN5P1Q3KNT7 163 aa6.12□□□□□ -1.43
COLCA1-205ENST00000620864 ABHD17AQ96GS6 310 aa6.12□□□□□ -1.43
COLCA1-205ENST00000620864 TRAV2A0A0B4J234 112 aa6.12□□□□□ -1.43
COLCA1-205ENST00000620864 TMEM187Q14656 261 aa6.12□□□□□ -1.43
COLCA1-205ENST00000620864 C3AR1Q16581 482 aa6.12□□□□□ -1.43
COLCA1-205ENST00000620864 PCSK4Q6UW60 755 aa6.12□□□□□ -1.43
COLCA1-205ENST00000620864 FAM110DQ8TAY7 271 aaPredicted RBP6.12□□□□□ -1.43
COLCA1-205ENST00000620864 RCC1LQ96I51 464 aaKnown RBP6.12□□□□□ -1.43
COLCA1-205ENST00000620864 KLK15Q9H2R5 256 aa6.12□□□□□ -1.43
COLCA1-205ENST00000620864 GNLYP22749 145 aa6.12□□□□□ -1.43
COLCA1-205ENST00000620864 RND2P52198 227 aa6.12□□□□□ -1.43
COLCA1-205ENST00000620864 KIAA1644Q3SXP7 199 aa6.12□□□□□ -1.43
COLCA1-205ENST00000620864 FER1L6-AS1Q8NA97 138 aa6.12□□□□□ -1.43
COLCA1-205ENST00000620864 MDC1Q14676 2089 aaKnown RBP6.12□□□□□ -1.43
COLCA1-205ENST00000620864 RGPD3A6NKT7 1758 aaPredicted RBP6.12□□□□□ -1.43
COLCA1-205ENST00000620864 IGKV3D-11A0A0A0MRZ8 115 aa6.12□□□□□ -1.43
COLCA1-205ENST00000620864 TRBV5-7A0A0A0MS05 114 aa6.12□□□□□ -1.43
COLCA1-205ENST00000620864 PROB1E7EW31 1015 aa6.12□□□□□ -1.43
COLCA1-205ENST00000620864 IGKV3-11P04433 115 aa6.12□□□□□ -1.43
COLCA1-205ENST00000620864 HTN3P15516 51 aa6.12□□□□□ -1.43
COLCA1-205ENST00000620864 MPV17P39210 176 aa6.12□□□□□ -1.43
COLCA1-205ENST00000620864 EFNB2P52799 333 aa6.12□□□□□ -1.43
COLCA1-205ENST00000620864 OR4D11Q8NGI4 311 aa6.12□□□□□ -1.43
COLCA1-205ENST00000620864 A0A1B0GW64 132 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms