RNA–Protein interactions for RNA: ENST00000620787.4

PDLIM3-212, Transcript of PDZ and LIM domain 3, humanhuman

TSL 4 BASIC

Gene PDLIM3, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-212ENST00000620787 MT-ND6P03923 174 aa16.09■□□□□ 0.17
PDLIM3-212ENST00000620787 CD46P15529 392 aa16.09■□□□□ 0.17
PDLIM3-212ENST00000620787 CRYBB3P26998 211 aa16.09■□□□□ 0.17
PDLIM3-212ENST00000620787 FABP6P51161 128 aa16.09■□□□□ 0.17
PDLIM3-212ENST00000620787 UTF1Q5T230 341 aa16.09■□□□□ 0.17
PDLIM3-212ENST00000620787 WDR73Q6P4I2 378 aa16.09■□□□□ 0.17
PDLIM3-212ENST00000620787 PQLC2Q6ZP29 291 aa16.09■□□□□ 0.17
PDLIM3-212ENST00000620787 Q6ZT83 130 aa16.09■□□□□ 0.17
PDLIM3-212ENST00000620787 NEUROG1Q92886 237 aa16.09■□□□□ 0.17
PDLIM3-212ENST00000620787 RNF2Q99496 336 aa16.09■□□□□ 0.17
PDLIM3-212ENST00000620787 RNASE7Q9H1E1 156 aaKnown RBP16.09■□□□□ 0.17
PDLIM3-212ENST00000620787 DUSP13Q9UII6 198 aa16.09■□□□□ 0.17
PDLIM3-212ENST00000620787 AHRRA9YTQ3 701 aa16.09■□□□□ 0.17
PDLIM3-212ENST00000620787 F2RL2O00254 374 aa16.09■□□□□ 0.17
PDLIM3-212ENST00000620787 LINC00614P0C842 121 aa16.09■□□□□ 0.17
PDLIM3-212ENST00000620787 PSG5Q15238 335 aa16.09■□□□□ 0.17
PDLIM3-212ENST00000620787 CR1LQ2VPA4 569 aa16.09■□□□□ 0.17
PDLIM3-212ENST00000620787 OR10J3Q5JRS4 329 aa16.09■□□□□ 0.17
PDLIM3-212ENST00000620787 OR4S2Q8NH73 311 aa16.09■□□□□ 0.17
PDLIM3-212ENST00000620787 KCNS1Q96KK3 526 aa16.09■□□□□ 0.17
PDLIM3-212ENST00000620787 RCHY1Q96PM5 261 aa16.09■□□□□ 0.17
PDLIM3-212ENST00000620787 NRN1Q9NPD7 142 aa16.09■□□□□ 0.17
PDLIM3-212ENST00000620787 TMEM14BQ9NUH8 114 aa16.09■□□□□ 0.17
PDLIM3-212ENST00000620787 FOXA2Q9Y261 457 aaPredicted RBP16.09■□□□□ 0.17
PDLIM3-212ENST00000620787 RELQ04864 619 aaPredicted RBP16.08■□□□□ 0.17
PDLIM3-212ENST00000620787 KIAA1644Q3SXP7 199 aa16.08■□□□□ 0.17
PDLIM3-212ENST00000620787 C1orf174Q8IYL3 243 aa16.08■□□□□ 0.17
PDLIM3-212ENST00000620787 OSTCQ9NRP0 149 aa16.08■□□□□ 0.17
PDLIM3-212ENST00000620787 HSPE1P61604 102 aaKnown RBP16.08■□□□□ 0.16
PDLIM3-212ENST00000620787 FXYD3Q14802 87 aa16.08■□□□□ 0.16
PDLIM3-212ENST00000620787 OR4A47Q6IF82 309 aa16.08■□□□□ 0.16
PDLIM3-212ENST00000620787 UBALD2Q8IYN6 164 aa16.08■□□□□ 0.16
PDLIM3-212ENST00000620787 ZNF503Q96F45 646 aa16.08■□□□□ 0.16
PDLIM3-212ENST00000620787 DCAF16Q9NXF7 216 aa16.08■□□□□ 0.16
PDLIM3-212ENST00000620787 CLCF1Q9UBD9 225 aa16.08■□□□□ 0.16
PDLIM3-212ENST00000620787 IL19Q9UHD0 177 aa16.08■□□□□ 0.16
PDLIM3-212ENST00000620787 YLPM1P49750 1951 aaKnown RBP16.08■□□□□ 0.16
PDLIM3-212ENST00000620787 TRIOBPQ9H2D6 2365 aa16.08■□□□□ 0.16
PDLIM3-212ENST00000620787 A0A1W2PS18 150 aa16.07■□□□□ 0.16
PDLIM3-212ENST00000620787 TMEM167BQ9NRX6 74 aa16.07■□□□□ 0.16
PDLIM3-212ENST00000620787 SLC45A2Q9UMX9 530 aa16.07■□□□□ 0.16
PDLIM3-212ENST00000620787 NBEAQ8NFP9 2946 aa16.07■□□□□ 0.16
PDLIM3-212ENST00000620787 MGST3O14880 152 aa16.07■□□□□ 0.16
PDLIM3-212ENST00000620787 LAMTOR5O43504 91 aa16.07■□□□□ 0.16
PDLIM3-212ENST00000620787 CECR9P0C854 216 aa16.07■□□□□ 0.16
PDLIM3-212ENST00000620787 MYOD1P15172 320 aa16.07■□□□□ 0.16
PDLIM3-212ENST00000620787 AMTP48728 403 aa16.07■□□□□ 0.16
PDLIM3-212ENST00000620787 MRPS11P82912 194 aaKnown RBP16.07■□□□□ 0.16
PDLIM3-212ENST00000620787 FNDC10F2Z333 226 aa16.06■□□□□ 0.16
PDLIM3-212ENST00000620787 SFTPCP11686 197 aa16.06■□□□□ 0.16
PDLIM3-212ENST00000620787 TFPI2P48307 235 aa16.06■□□□□ 0.16
PDLIM3-212ENST00000620787 SLC35B1P78383 322 aa16.06■□□□□ 0.16
PDLIM3-212ENST00000620787 LPAL2Q16609 132 aa16.06■□□□□ 0.16
PDLIM3-212ENST00000620787 SPATA45Q537H7 98 aa16.06■□□□□ 0.16
PDLIM3-212ENST00000620787 FAM214BQ7L5A3 538 aa16.06■□□□□ 0.16
PDLIM3-212ENST00000620787 LEAP2Q969E1 77 aa16.06■□□□□ 0.16
PDLIM3-212ENST00000620787 FAM122AQ96E09 287 aa16.06■□□□□ 0.16
PDLIM3-212ENST00000620787 NABP2Q9BQ15 211 aa16.06■□□□□ 0.16
PDLIM3-212ENST00000620787 IDI2-AS1Q9NZ38 188 aa16.06■□□□□ 0.16
PDLIM3-212ENST00000620787 DSCAML1Q8TD84 2053 aa16.06■□□□□ 0.16
PDLIM3-212ENST00000620787 SRRM5B3KS81 715 aa16.06■□□□□ 0.16
PDLIM3-212ENST00000620787 IGLV2-8P01709 118 aa16.06■□□□□ 0.16
PDLIM3-212ENST00000620787 OR5G3P0C626 314 aa16.06■□□□□ 0.16
PDLIM3-212ENST00000620787 ZNF83P51522 516 aa16.06■□□□□ 0.16
PDLIM3-212ENST00000620787 TCL1AP56279 114 aa16.06■□□□□ 0.16
PDLIM3-212ENST00000620787 RPL19P84098 196 aaKnown RBP16.06■□□□□ 0.16
PDLIM3-212ENST00000620787 COX19Q49B96 90 aa16.06■□□□□ 0.16
PDLIM3-212ENST00000620787 COL5A1-AS1Q5SY13 56 aa16.06■□□□□ 0.16
PDLIM3-212ENST00000620787 ENY2Q9NPA8 101 aa16.06■□□□□ 0.16
PDLIM3-212ENST00000620787 URB1O60287 2271 aaKnown RBP16.05■□□□□ 0.16
PDLIM3-212ENST00000620787 BMPR1BO00238 502 aa16.05■□□□□ 0.16
PDLIM3-212ENST00000620787 ZNF253O75346 499 aa16.05■□□□□ 0.16
PDLIM3-212ENST00000620787 PMCHP20382 165 aa16.05■□□□□ 0.16
PDLIM3-212ENST00000620787 GUSBP1Q15486 140 aa16.05■□□□□ 0.16
PDLIM3-212ENST00000620787 CORO2AQ92828 525 aa16.05■□□□□ 0.16
PDLIM3-212ENST00000620787 COL6A3P12111 3177 aa16.05■□□□□ 0.16
PDLIM3-212ENST00000620787 IGHV3OR15-7A0A075B7D8 119 aa16.05■□□□□ 0.16
PDLIM3-212ENST00000620787 GGTLC3B5MD39 225 aa16.05■□□□□ 0.16
PDLIM3-212ENST00000620787 ISLRO14498 428 aa16.05■□□□□ 0.16
PDLIM3-212ENST00000620787 AMY1AP04745 511 aa16.05■□□□□ 0.16
PDLIM3-212ENST00000620787 HOXC12P31275 282 aa16.05■□□□□ 0.16
PDLIM3-212ENST00000620787 TIGITQ495A1 244 aa16.05■□□□□ 0.16
PDLIM3-212ENST00000620787 CALYQ9NYX4 217 aa16.05■□□□□ 0.16
PDLIM3-212ENST00000620787 MMP23AO75900 390 aa16.04■□□□□ 0.16
PDLIM3-212ENST00000620787 SRIP30626 198 aa16.04■□□□□ 0.16
PDLIM3-212ENST00000620787 MBNL2Q5VZF2 373 aaKnown RBP16.04■□□□□ 0.16
PDLIM3-212ENST00000620787 MOB3BQ86TA1 216 aa16.04■□□□□ 0.16
PDLIM3-212ENST00000620787 NIT1Q86X76 327 aa16.04■□□□□ 0.16
PDLIM3-212ENST00000620787 TECRQ9NZ01 308 aaKnown RBP16.04■□□□□ 0.16
PDLIM3-212ENST00000620787 IGKV1OR2-108A0A075B7D4 117 aa16.04■□□□□ 0.16
PDLIM3-212ENST00000620787 SMIM27A0A1W2PRY6 76 aa16.04■□□□□ 0.16
PDLIM3-212ENST00000620787 ZNF324O75467 553 aaPredicted RBP16.04■□□□□ 0.16
PDLIM3-212ENST00000620787 SAA2P0DJI9 122 aaPredicted RBP16.04■□□□□ 0.16
PDLIM3-212ENST00000620787 RAB7AP51149 207 aa16.04■□□□□ 0.16
PDLIM3-212ENST00000620787 SUMO1P63165 101 aaKnown RBP16.04■□□□□ 0.16
PDLIM3-212ENST00000620787 CNEP1R1Q8N9A8 125 aa16.04■□□□□ 0.16
PDLIM3-212ENST00000620787 ZNRF1Q8ND25 227 aa16.04■□□□□ 0.16
PDLIM3-212ENST00000620787 OR2Z1Q8NG97 314 aa16.04■□□□□ 0.16
PDLIM3-212ENST00000620787 IGF2BP2-AS1Q96M15 143 aa16.04■□□□□ 0.16
PDLIM3-212ENST00000620787 TUBG2Q9NRH3 451 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms