RNA–Protein interactions for RNA: ENST00000618440.1

U6.42-201, humanhuman

BASIC

Gene U6, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U6.42-201ENST00000618440 SDK1Q7Z5N4 2213 aa0.85□□□□□ -2.27
U6.42-201ENST00000618440 TOPBP1Q92547 1522 aa0.85□□□□□ -2.27
U6.42-201ENST00000618440 IGKV1D-43A0A0B4J1Z2 117 aa0.85□□□□□ -2.27
U6.42-201ENST00000618440 A0A0J9YY10 115 aa0.85□□□□□ -2.27
U6.42-201ENST00000618440 A0A1B0GX78 115 aa0.85□□□□□ -2.27
U6.42-201ENST00000618440 MEIS3P1A6NDR6 274 aa0.85□□□□□ -2.27
U6.42-201ENST00000618440 IGKV1-5P01602 117 aa0.85□□□□□ -2.27
U6.42-201ENST00000618440 IGHV3-7P01780 117 aa0.85□□□□□ -2.27
U6.42-201ENST00000618440 MSNP26038 577 aaKnown RBP0.85□□□□□ -2.27
U6.42-201ENST00000618440 S100A7P31151 101 aa0.85□□□□□ -2.27
U6.42-201ENST00000618440 TCL1AP56279 114 aa0.85□□□□□ -2.27
U6.42-201ENST00000618440 HIST3H3Q16695 136 aa0.85□□□□□ -2.27
U6.42-201ENST00000618440 ZNF705AQ6ZN79 300 aaPredicted RBP0.85□□□□□ -2.27
U6.42-201ENST00000618440 Q6ZS49 121 aa0.85□□□□□ -2.27
U6.42-201ENST00000618440 C7orf65Q6ZTY9 151 aa0.85□□□□□ -2.27
U6.42-201ENST00000618440 MICAL3Q7RTP6 2002 aa0.85□□□□□ -2.27
U6.42-201ENST00000618440 C10orf126Q8N4M7 172 aa0.85□□□□□ -2.27
U6.42-201ENST00000618440 TBC1D19Q8N5T2 526 aa0.85□□□□□ -2.27
U6.42-201ENST00000618440 DEFB119Q8N690 84 aa0.85□□□□□ -2.27
U6.42-201ENST00000618440 MRPL32Q9BYC8 188 aaKnown RBP0.85□□□□□ -2.27
U6.42-201ENST00000618440 EFCAB1Q9HAE3 211 aa0.85□□□□□ -2.27
U6.42-201ENST00000618440 C8orf4Q9NR00 106 aa0.85□□□□□ -2.27
U6.42-201ENST00000618440 CISHQ9NSE2 258 aa0.85□□□□□ -2.27
U6.42-201ENST00000618440 IL36BQ9NZH7 164 aa0.85□□□□□ -2.27
U6.42-201ENST00000618440 NAT8Q9UHE5 227 aa0.85□□□□□ -2.27
U6.42-201ENST00000618440 NEO1Q92859 1461 aa0.85□□□□□ -2.27
U6.42-201ENST00000618440 ADCY9O60503 1353 aa0.84□□□□□ -2.27
U6.42-201ENST00000618440 MTUS2Q5JR59 1369 aa0.84□□□□□ -2.27
U6.42-201ENST00000618440 WRNQ14191 1432 aaPredicted RBP eCLIP0.84□□□□□ -2.27
U6.42-201ENST00000618440 MEIKINA0A087WXM9 373 aa0.84□□□□□ -2.27
U6.42-201ENST00000618440 TRBV10-2A0A0K0K1G8 114 aa0.84□□□□□ -2.27
U6.42-201ENST00000618440 TRAPPC13A5PLN9 417 aa0.84□□□□□ -2.27
U6.42-201ENST00000618440 IBA57-AS1B1ANH7 110 aa0.84□□□□□ -2.27
U6.42-201ENST00000618440 EEF1E1-BLOC1S5C9J1V9 151 aa0.84□□□□□ -2.27
U6.42-201ENST00000618440 KCNK1O00180 336 aa0.84□□□□□ -2.27
U6.42-201ENST00000618440 SULT1A3P0DMM9 295 aa0.84□□□□□ -2.27
U6.42-201ENST00000618440 SULT1A4P0DMN0 295 aa0.84□□□□□ -2.27
U6.42-201ENST00000618440 ZNF80P51504 273 aaPredicted RBP0.84□□□□□ -2.27
U6.42-201ENST00000618440 CCL20P78556 96 aa0.84□□□□□ -2.27
U6.42-201ENST00000618440 Q1T7F1 81 aa0.84□□□□□ -2.27
U6.42-201ENST00000618440 ARHGAP11BQ3KRB8 267 aa0.84□□□□□ -2.27
U6.42-201ENST00000618440 C9orf64Q5T6V5 341 aa0.84□□□□□ -2.27
U6.42-201ENST00000618440 GLT8D1Q68CQ7 371 aa0.84□□□□□ -2.27
U6.42-201ENST00000618440 PTRHD1Q6GMV3 140 aaKnown RBP0.84□□□□□ -2.27
U6.42-201ENST00000618440 Q6ZSA8 131 aa0.84□□□□□ -2.27
U6.42-201ENST00000618440 SLC36A1Q7Z2H8 476 aa0.84□□□□□ -2.27
U6.42-201ENST00000618440 ZNF439Q8NDP4 499 aa0.84□□□□□ -2.27
U6.42-201ENST00000618440 OR51D1Q8NGF3 324 aa0.84□□□□□ -2.27
U6.42-201ENST00000618440 MBD3L1Q8WWY6 194 aa0.84□□□□□ -2.27
U6.42-201ENST00000618440 ACOT12Q8WYK0 555 aa0.84□□□□□ -2.27
U6.42-201ENST00000618440 KLK6Q92876 244 aa0.84□□□□□ -2.27
U6.42-201ENST00000618440 Q96M85 177 aa0.84□□□□□ -2.27
U6.42-201ENST00000618440 RETNLBQ9BQ08 111 aa0.84□□□□□ -2.27
U6.42-201ENST00000618440 NAA38Q9BRA0 125 aaKnown RBP0.84□□□□□ -2.27
U6.42-201ENST00000618440 CMTM6Q9NX76 183 aa0.84□□□□□ -2.27
U6.42-201ENST00000618440 TP73-AS1Q9UF72 201 aa0.84□□□□□ -2.27
U6.42-201ENST00000618440 LHFPL6Q9Y693 200 aa0.84□□□□□ -2.27
U6.42-201ENST00000618440 FREM1Q5H8C1 2179 aa0.84□□□□□ -2.28
U6.42-201ENST00000618440 ZNF106Q9H2Y7 1883 aaKnown RBP0.84□□□□□ -2.28
U6.42-201ENST00000618440 COL6A6A6NMZ7 2263 aa0.84□□□□□ -2.28
U6.42-201ENST00000618440 BAZ2BQ9UIF8 2168 aaKnown RBP0.83□□□□□ -2.28
U6.42-201ENST00000618440 ECM29Q5VYK3 1845 aa0.83□□□□□ -2.28
U6.42-201ENST00000618440 HELZ2Q9BYK8 2649 aaKnown RBP0.83□□□□□ -2.28
U6.42-201ENST00000618440 A0A1B0GV50 99 aa0.83□□□□□ -2.28
U6.42-201ENST00000618440 KCNE1P15382 129 aa0.83□□□□□ -2.28
U6.42-201ENST00000618440 HIST1H1TP22492 207 aaPredicted RBP0.83□□□□□ -2.28
U6.42-201ENST00000618440 AKR1C3P42330 323 aa0.83□□□□□ -2.28
U6.42-201ENST00000618440 MAGEA12P43365 314 aa0.83□□□□□ -2.28
U6.42-201ENST00000618440 HAAOP46952 286 aa0.83□□□□□ -2.28
U6.42-201ENST00000618440 SUPT4H1P63272 117 aaKnown RBP0.83□□□□□ -2.28
U6.42-201ENST00000618440 RPL18Q07020 188 aaKnown RBP0.83□□□□□ -2.28
U6.42-201ENST00000618440 KISS1Q15726 138 aa0.83□□□□□ -2.28
U6.42-201ENST00000618440 NNATQ16517 81 aa0.83□□□□□ -2.28
U6.42-201ENST00000618440 FAM173BQ6P4H8 233 aa0.83□□□□□ -2.28
U6.42-201ENST00000618440 FP248Q71RG6 208 aaPredicted RBP0.83□□□□□ -2.28
U6.42-201ENST00000618440 TMEM86AQ8N2M4 240 aa0.83□□□□□ -2.28
U6.42-201ENST00000618440 OR8J2Q8NGG1 315 aa0.83□□□□□ -2.28
U6.42-201ENST00000618440 MRPL30Q8TCC3 161 aaKnown RBP0.83□□□□□ -2.28
U6.42-201ENST00000618440 WDR61Q9GZS3 305 aaKnown RBP0.83□□□□□ -2.28
U6.42-201ENST00000618440 LSM5Q9Y4Y9 91 aaKnown RBP0.83□□□□□ -2.28
U6.42-201ENST00000618440 MYOFQ9NZM1 2061 aa0.83□□□□□ -2.28
U6.42-201ENST00000618440 TONSLQ96HA7 1378 aa0.83□□□□□ -2.28
U6.42-201ENST00000618440 PLXND1Q9Y4D7 1925 aa0.82□□□□□ -2.28
U6.42-201ENST00000618440 TRBV20OR9-2A0A075B6H5 130 aa0.82□□□□□ -2.28
U6.42-201ENST00000618440 TGIF2-C20orf24A0A0A6YYL0 155 aa0.82□□□□□ -2.28
U6.42-201ENST00000618440 TRBV6-5A0A0K0K1A5 114 aa0.82□□□□□ -2.28
U6.42-201ENST00000618440 IGKV2-29A2NJV5 120 aaPredicted RBP0.82□□□□□ -2.28
U6.42-201ENST00000618440 GGT3PA6NGU5 568 aa0.82□□□□□ -2.28
U6.42-201ENST00000618440 F8W036 122 aa0.82□□□□□ -2.28
U6.42-201ENST00000618440 CHP2O43745 196 aa0.82□□□□□ -2.28
U6.42-201ENST00000618440 NOS1APO75052 506 aaPredicted RBP0.82□□□□□ -2.28
U6.42-201ENST00000618440 PRM2P04554 102 aa0.82□□□□□ -2.28
U6.42-201ENST00000618440 TRGC1P0CF51 173 aa0.82□□□□□ -2.28
U6.42-201ENST00000618440 G6PCP35575 357 aa0.82□□□□□ -2.28
U6.42-201ENST00000618440 KRTAP10-4P60372 401 aaPredicted RBP0.82□□□□□ -2.28
U6.42-201ENST00000618440 SNRPD2P62316 118 aaKnown RBP0.82□□□□□ -2.28
U6.42-201ENST00000618440 IBA57Q5T440 356 aaKnown RBP0.82□□□□□ -2.28
U6.42-201ENST00000618440 C8orf74Q6P047 294 aa0.82□□□□□ -2.28
U6.42-201ENST00000618440 UNQ6190/PRO20217Q6UXQ8 127 aa0.82□□□□□ -2.28
U6.42-201ENST00000618440 DHFR2Q86XF0 187 aa0.82□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms