RNA–Protein interactions for RNA: ENST00000617641.4

PCDHGC3-205, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGC3, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-205ENST00000617641 A0A1W2PR64 198 aa14.02□□□□□ -0.17
PCDHGC3-205ENST00000617641 A0A1W2PRV1 198 aa14.02□□□□□ -0.17
PCDHGC3-205ENST00000617641 C17orf112F2Z3M2 114 aa14.02□□□□□ -0.17
PCDHGC3-205ENST00000617641 MC5RP33032 325 aa14.02□□□□□ -0.17
PCDHGC3-205ENST00000617641 ARF6P62330 175 aa14.02□□□□□ -0.17
PCDHGC3-205ENST00000617641 ZNF506Q5JVG8 444 aa14.02□□□□□ -0.17
PCDHGC3-205ENST00000617641 BEND2Q8NDZ0 799 aa14.02□□□□□ -0.17
PCDHGC3-205ENST00000617641 OR4P4Q8NGL7 312 aa14.02□□□□□ -0.17
PCDHGC3-205ENST00000617641 OR10G4Q8NGN3 311 aa14.02□□□□□ -0.17
PCDHGC3-205ENST00000617641 OR10G9Q8NGN4 311 aa14.02□□□□□ -0.17
PCDHGC3-205ENST00000617641 OR10G7Q8NGN6 311 aa14.02□□□□□ -0.17
PCDHGC3-205ENST00000617641 TMEM167AQ8TBQ9 72 aa14.02□□□□□ -0.17
PCDHGC3-205ENST00000617641 RXFP4Q8TDU9 374 aa14.02□□□□□ -0.17
PCDHGC3-205ENST00000617641 SLC39A9Q9NUM3 307 aa14.02□□□□□ -0.17
PCDHGC3-205ENST00000617641 HMGB3O15347 200 aaKnown RBP14.01□□□□□ -0.17
PCDHGC3-205ENST00000617641 FBP1P09467 338 aa14.01□□□□□ -0.17
PCDHGC3-205ENST00000617641 USF1P22415 310 aaPredicted RBP14.01□□□□□ -0.17
PCDHGC3-205ENST00000617641 GPR6P46095 362 aaPredicted RBP14.01□□□□□ -0.17
PCDHGC3-205ENST00000617641 ARSJQ5FYB0 599 aaPredicted RBP14.01□□□□□ -0.17
PCDHGC3-205ENST00000617641 CLRN3Q8NCR9 226 aa14.01□□□□□ -0.17
PCDHGC3-205ENST00000617641 COMMD5Q9GZQ3 224 aa14.01□□□□□ -0.17
PCDHGC3-205ENST00000617641 TPSG1Q9NRR2 321 aa14.01□□□□□ -0.17
PCDHGC3-205ENST00000617641 LOC105371242A0A075B767 164 aa14.01□□□□□ -0.17
PCDHGC3-205ENST00000617641 E7EUB6 86 aa14.01□□□□□ -0.17
PCDHGC3-205ENST00000617641 SLC25A17O43808 307 aa14.01□□□□□ -0.17
PCDHGC3-205ENST00000617641 S100A6P06703 90 aa14.01□□□□□ -0.17
PCDHGC3-205ENST00000617641 DEFA4P12838 97 aa14.01□□□□□ -0.17
PCDHGC3-205ENST00000617641 CBLN2Q8IUK8 224 aa14.01□□□□□ -0.17
PCDHGC3-205ENST00000617641 VSTM2AQ8TAG5 236 aa14.01□□□□□ -0.17
PCDHGC3-205ENST00000617641 SMDT1Q9H4I9 107 aa14.01□□□□□ -0.17
PCDHGC3-205ENST00000617641 SIRT7Q9NRC8 400 aa14.01□□□□□ -0.17
PCDHGC3-205ENST00000617641 ZFP92A6NM28 416 aa14□□□□□ -0.17
PCDHGC3-205ENST00000617641 MBP02144 154 aa14□□□□□ -0.17
PCDHGC3-205ENST00000617641 C10orf55Q5SWW7 151 aa14□□□□□ -0.17
PCDHGC3-205ENST00000617641 MOB3BQ86TA1 216 aa14□□□□□ -0.17
PCDHGC3-205ENST00000617641 OR1L8Q8NGR8 309 aa14□□□□□ -0.17
PCDHGC3-205ENST00000617641 OR4A5Q8NH83 315 aa14□□□□□ -0.17
PCDHGC3-205ENST00000617641 C1orf159Q96HA4 380 aa14□□□□□ -0.17
PCDHGC3-205ENST00000617641 MGST2Q99735 147 aa14□□□□□ -0.17
PCDHGC3-205ENST00000617641 ZNF430Q9H8G1 570 aaPredicted RBP14□□□□□ -0.17
PCDHGC3-205ENST00000617641 NDUFA4L2Q9NRX3 87 aa14□□□□□ -0.17
PCDHGC3-205ENST00000617641 INSIG2Q9Y5U4 225 aa14□□□□□ -0.17
PCDHGC3-205ENST00000617641 IGHV1-3A0A0C4DH29 117 aa13.99□□□□□ -0.17
PCDHGC3-205ENST00000617641 LOC102723971A0A1B0GUV8 181 aa13.99□□□□□ -0.17
PCDHGC3-205ENST00000617641 SRP19P09132 144 aaKnown RBP13.99□□□□□ -0.17
PCDHGC3-205ENST00000617641 AKIRIN2Q53H80 203 aa13.99□□□□□ -0.17
PCDHGC3-205ENST00000617641 MPDU1O75352 247 aa13.99□□□□□ -0.17
PCDHGC3-205ENST00000617641 CEBPGP53567 150 aa13.99□□□□□ -0.17
PCDHGC3-205ENST00000617641 VMA21Q3ZAQ7 101 aa13.99□□□□□ -0.17
PCDHGC3-205ENST00000617641 GCSAMLQ5JQS6 135 aa13.99□□□□□ -0.17
PCDHGC3-205ENST00000617641 CTXND1A0A1B0GTU2 59 aa13.98□□□□□ -0.17
PCDHGC3-205ENST00000617641 EFNA4P52798 201 aa13.98□□□□□ -0.17
PCDHGC3-205ENST00000617641 SOHLH1Q5JUK2 328 aa13.98□□□□□ -0.17
PCDHGC3-205ENST00000617641 RPEQ96AT9 228 aa13.98□□□□□ -0.17
PCDHGC3-205ENST00000617641 GGTLC1Q9BX51 225 aa13.98□□□□□ -0.17
PCDHGC3-205ENST00000617641 NPVFQ9HCQ7 196 aa13.98□□□□□ -0.17
PCDHGC3-205ENST00000617641 AMMECR1Q9Y4X0 333 aaPredicted RBP13.98□□□□□ -0.17
PCDHGC3-205ENST00000617641 HSPB1P04792 205 aaKnown RBP13.98□□□□□ -0.17
PCDHGC3-205ENST00000617641 RNASE2P10153 161 aaKnown RBP13.98□□□□□ -0.17
PCDHGC3-205ENST00000617641 BCL2P10415 239 aa13.98□□□□□ -0.17
PCDHGC3-205ENST00000617641 CNTFRP26992 372 aa13.98□□□□□ -0.17
PCDHGC3-205ENST00000617641 KLRD1Q13241 179 aa13.98□□□□□ -0.17
PCDHGC3-205ENST00000617641 KHDC3LQ587J8 217 aa13.98□□□□□ -0.17
PCDHGC3-205ENST00000617641 LDLRAD2Q5SZI1 272 aa13.98□□□□□ -0.17
PCDHGC3-205ENST00000617641 ACTR3CQ9C0K3 210 aaPredicted RBP13.98□□□□□ -0.17
PCDHGC3-205ENST00000617641 LSM4Q9Y4Z0 139 aaKnown RBP13.98□□□□□ -0.17
PCDHGC3-205ENST00000617641 CGB1A6NKQ9 187 aa13.97□□□□□ -0.17
PCDHGC3-205ENST00000617641 LY6LH3BQJ8 138 aa13.97□□□□□ -0.17
PCDHGC3-205ENST00000617641 LGALS7P47929 136 aa13.97□□□□□ -0.17
PCDHGC3-205ENST00000617641 MRGPRG-AS1Q2M3A8 158 aa13.97□□□□□ -0.17
PCDHGC3-205ENST00000617641 BSXQ3C1V8 233 aa13.97□□□□□ -0.17
PCDHGC3-205ENST00000617641 ACOT6Q3I5F7 207 aaPredicted RBP13.97□□□□□ -0.17
PCDHGC3-205ENST00000617641 C2orf83Q53S99 150 aa13.97□□□□□ -0.17
PCDHGC3-205ENST00000617641 MIC13Q5XKP0 118 aa13.97□□□□□ -0.17
PCDHGC3-205ENST00000617641 CYB561D1Q8N8Q1 229 aa13.97□□□□□ -0.17
PCDHGC3-205ENST00000617641 RAB24Q969Q5 203 aa13.97□□□□□ -0.17
PCDHGC3-205ENST00000617641 C20orf24Q9BUV8 137 aa13.97□□□□□ -0.17
PCDHGC3-205ENST00000617641 TMPRSS5Q9H3S3 457 aa13.97□□□□□ -0.17
PCDHGC3-205ENST00000617641 CACNA1BQ00975 2339 aa13.97□□□□□ -0.17
PCDHGC3-205ENST00000617641 USP24Q9UPU5 2620 aa13.97□□□□□ -0.17
PCDHGC3-205ENST00000617641 OPRK1P41145 380 aa13.97□□□□□ -0.17
PCDHGC3-205ENST00000617641 AKR1C3P42330 323 aa13.97□□□□□ -0.17
PCDHGC3-205ENST00000617641 SSMEM1Q8WWF3 244 aa13.97□□□□□ -0.17
PCDHGC3-205ENST00000617641 M0R1W7 72 aa13.96□□□□□ -0.17
PCDHGC3-205ENST00000617641 YIF1AO95070 293 aa13.96□□□□□ -0.17
PCDHGC3-205ENST00000617641 AWAT1Q58HT5 328 aa13.96□□□□□ -0.17
PCDHGC3-205ENST00000617641 PXMP4Q9Y6I8 212 aa13.96□□□□□ -0.17
PCDHGC3-205ENST00000617641 M0R036 132 aa13.96□□□□□ -0.18
PCDHGC3-205ENST00000617641 CYB5BO43169 146 aa13.96□□□□□ -0.18
PCDHGC3-205ENST00000617641 PRB1P04280 392 aa13.96□□□□□ -0.18
PCDHGC3-205ENST00000617641 ZFP36P26651 326 aaKnown RBP13.96□□□□□ -0.18
PCDHGC3-205ENST00000617641 TEPPQ6URK8 271 aa13.96□□□□□ -0.18
PCDHGC3-205ENST00000617641 A0A1W2PPI3 338 aa13.95□□□□□ -0.18
PCDHGC3-205ENST00000617641 RNF224P0DH78 156 aa13.95□□□□□ -0.18
PCDHGC3-205ENST00000617641 CDC34P49427 236 aaPredicted RBP13.95□□□□□ -0.18
PCDHGC3-205ENST00000617641 S100A12P80511 92 aa13.95□□□□□ -0.18
PCDHGC3-205ENST00000617641 ERHP84090 104 aaKnown RBP13.95□□□□□ -0.18
PCDHGC3-205ENST00000617641 WT1-ASQ06250 92 aa13.95□□□□□ -0.18
PCDHGC3-205ENST00000617641 PUS1Q9Y606 427 aaKnown RBP eCLIP13.95□□□□□ -0.18
PCDHGC3-205ENST00000617641 A0A1W2PN81 502 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms