RNA–Protein interactions for RNA: ENST00000617222.4

PCDHGC3-204, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3 BASIC

Gene PCDHGC3, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-204ENST00000617222 MINDY2Q8NBR6 621 aa12.25□□□□□ -0.45
PCDHGC3-204ENST00000617222 OR5AU1Q8NGC0 362 aa12.25□□□□□ -0.45
PCDHGC3-204ENST00000617222 OR10W1Q8NGF6 305 aa12.25□□□□□ -0.45
PCDHGC3-204ENST00000617222 OR1S1Q8NH92 325 aa12.25□□□□□ -0.45
PCDHGC3-204ENST00000617222 TMEM68Q96MH6 324 aa12.25□□□□□ -0.45
PCDHGC3-204ENST00000617222 PDCD10Q9BUL8 212 aa12.25□□□□□ -0.45
PCDHGC3-204ENST00000617222 COA4Q9NYJ1 87 aa12.25□□□□□ -0.45
PCDHGC3-204ENST00000617222 ZNF257Q9Y2Q1 563 aa12.25□□□□□ -0.45
PCDHGC3-204ENST00000617222 ALG5Q9Y673 324 aa12.25□□□□□ -0.45
PCDHGC3-204ENST00000617222 C13orf42A0A1B0GVH6 325 aa12.24□□□□□ -0.45
PCDHGC3-204ENST00000617222 A0A1W2PN81 502 aa12.24□□□□□ -0.45
PCDHGC3-204ENST00000617222 C7orf66A4D0T2 115 aa12.24□□□□□ -0.45
PCDHGC3-204ENST00000617222 MPTX1A8MV57 137 aa12.24□□□□□ -0.45
PCDHGC3-204ENST00000617222 FAM25EA8MYX2 175 aa12.24□□□□□ -0.45
PCDHGC3-204ENST00000617222 CCSO14618 274 aa12.24□□□□□ -0.45
PCDHGC3-204ENST00000617222 NXPH3O95157 252 aa12.24□□□□□ -0.45
PCDHGC3-204ENST00000617222 SLC25A6P12236 298 aa12.24□□□□□ -0.45
PCDHGC3-204ENST00000617222 AREGP15514 252 aa12.24□□□□□ -0.45
PCDHGC3-204ENST00000617222 CHRNA7P36544 502 aa12.24□□□□□ -0.45
PCDHGC3-204ENST00000617222 KRTAP10-3P60369 221 aa12.24□□□□□ -0.45
PCDHGC3-204ENST00000617222 CFHR3Q02985 330 aa12.24□□□□□ -0.45
PCDHGC3-204ENST00000617222 WIPF2Q8TF74 440 aaPredicted RBP12.24□□□□□ -0.45
PCDHGC3-204ENST00000617222 OR10C1Q96KK4 312 aa12.24□□□□□ -0.45
PCDHGC3-204ENST00000617222 C5orf51A6NDU8 294 aa12.23□□□□□ -0.45
PCDHGC3-204ENST00000617222 SSNA1O43805 119 aa12.23□□□□□ -0.45
PCDHGC3-204ENST00000617222 SOX15O60248 233 aa12.23□□□□□ -0.45
PCDHGC3-204ENST00000617222 PITX3O75364 302 aa12.23□□□□□ -0.45
PCDHGC3-204ENST00000617222 REG1AP05451 166 aa12.23□□□□□ -0.45
PCDHGC3-204ENST00000617222 OR13C7P0DN81 318 aa12.23□□□□□ -0.45
PCDHGC3-204ENST00000617222 SPCS3P61009 180 aa12.23□□□□□ -0.45
PCDHGC3-204ENST00000617222 PRCDQ00LT1 54 aa12.23□□□□□ -0.45
PCDHGC3-204ENST00000617222 C2orf68Q2NKX9 166 aa12.23□□□□□ -0.45
PCDHGC3-204ENST00000617222 AARDQ4LEZ3 155 aa12.23□□□□□ -0.45
PCDHGC3-204ENST00000617222 C12orf54Q6X4T0 127 aa12.23□□□□□ -0.45
PCDHGC3-204ENST00000617222 TTC9CQ8N5M4 171 aa12.23□□□□□ -0.45
PCDHGC3-204ENST00000617222 C11orf44Q8N8P7 122 aa12.23□□□□□ -0.45
PCDHGC3-204ENST00000617222 OR52E5Q8NH55 327 aa12.23□□□□□ -0.45
PCDHGC3-204ENST00000617222 SRSF8Q9BRL6 282 aaKnown RBP12.23□□□□□ -0.45
PCDHGC3-204ENST00000617222 ZNF355PQ9NSJ1 428 aa12.23□□□□□ -0.45
PCDHGC3-204ENST00000617222 IGLC7A0M8Q6 106 aa12.22□□□□□ -0.45
PCDHGC3-204ENST00000617222 CEBPZOSA8MTT3 80 aa12.22□□□□□ -0.45
PCDHGC3-204ENST00000617222 IGHG4P01861 327 aa12.22□□□□□ -0.45
PCDHGC3-204ENST00000617222 PSMB6P28072 239 aa12.22□□□□□ -0.45
PCDHGC3-204ENST00000617222 WT1-ASQ06250 92 aa12.22□□□□□ -0.45
PCDHGC3-204ENST00000617222 SRSF4Q08170 494 aaKnown RBP12.22□□□□□ -0.45
PCDHGC3-204ENST00000617222 IAH1Q2TAA2 248 aaPredicted RBP12.22□□□□□ -0.45
PCDHGC3-204ENST00000617222 CXorf66Q5JRM2 361 aaPredicted RBP12.22□□□□□ -0.45
PCDHGC3-204ENST00000617222 TEX38Q6PEX7 206 aa12.22□□□□□ -0.45
PCDHGC3-204ENST00000617222 OR5M8Q8NGP6 311 aa12.22□□□□□ -0.45
PCDHGC3-204ENST00000617222 FAM110DQ8TAY7 271 aaPredicted RBP12.22□□□□□ -0.45
PCDHGC3-204ENST00000617222 WFDC12Q8WWY7 111 aa12.22□□□□□ -0.45
PCDHGC3-204ENST00000617222 PLEKHA3Q9HB20 300 aa12.22□□□□□ -0.45
PCDHGC3-204ENST00000617222 GSKIPQ9P0R6 139 aa12.22□□□□□ -0.45
PCDHGC3-204ENST00000617222 FBN1P35555 2871 aaKnown RBP12.21□□□□□ -0.45
PCDHGC3-204ENST00000617222 NPIPB5A8MRT5 1133 aa12.21□□□□□ -0.45
PCDHGC3-204ENST00000617222 GOSR2O14653 212 aa12.21□□□□□ -0.45
PCDHGC3-204ENST00000617222 IGLV1-40P01703 118 aa12.21□□□□□ -0.45
PCDHGC3-204ENST00000617222 PF4V1P10720 104 aa12.21□□□□□ -0.45
PCDHGC3-204ENST00000617222 CD28P10747 220 aa12.21□□□□□ -0.45
PCDHGC3-204ENST00000617222 HOXA1P49639 335 aaPredicted RBP12.21□□□□□ -0.45
PCDHGC3-204ENST00000617222 TNFRSF9Q07011 255 aa12.21□□□□□ -0.45
PCDHGC3-204ENST00000617222 FOXE3Q13461 319 aa12.21□□□□□ -0.45
PCDHGC3-204ENST00000617222 TCTEX1D4Q5JR98 221 aa12.21□□□□□ -0.45
PCDHGC3-204ENST00000617222 HIST2H2BDQ6DRA6 164 aa12.21□□□□□ -0.45
PCDHGC3-204ENST00000617222 GSG1LQ6UXU4 331 aa12.21□□□□□ -0.45
PCDHGC3-204ENST00000617222 C19orf35Q6ZS72 473 aa12.21□□□□□ -0.45
PCDHGC3-204ENST00000617222 LCNL1Q6ZST4 164 aa12.21□□□□□ -0.45
PCDHGC3-204ENST00000617222 HSD17B13Q7Z5P4 300 aaPredicted RBP12.21□□□□□ -0.45
PCDHGC3-204ENST00000617222 COMMD1Q8N668 190 aa12.21□□□□□ -0.45
PCDHGC3-204ENST00000617222 ZBTB8BQ8NAP8 495 aaPredicted RBP12.21□□□□□ -0.45
PCDHGC3-204ENST00000617222 OR4X2Q8NGF9 303 aa12.21□□□□□ -0.45
PCDHGC3-204ENST00000617222 MS4A10Q96PG2 267 aa12.21□□□□□ -0.45
PCDHGC3-204ENST00000617222 KLK15Q9H2R5 256 aa12.21□□□□□ -0.45
PCDHGC3-204ENST00000617222 ENY2Q9NPA8 101 aa12.21□□□□□ -0.45
PCDHGC3-204ENST00000617222 HSPB7Q9UBY9 170 aa12.21□□□□□ -0.45
PCDHGC3-204ENST00000617222 CACFD1Q9UGQ2 172 aa12.21□□□□□ -0.45
PCDHGC3-204ENST00000617222 FBXO24O75426 580 aa12.2□□□□□ -0.46
PCDHGC3-204ENST00000617222 SIX6O95475 246 aa12.2□□□□□ -0.46
PCDHGC3-204ENST00000617222 PRH1P02810 166 aa12.2□□□□□ -0.46
PCDHGC3-204ENST00000617222 CRYGCP07315 174 aa12.2□□□□□ -0.46
PCDHGC3-204ENST00000617222 ELANEP08246 267 aa12.2□□□□□ -0.46
PCDHGC3-204ENST00000617222 CTRB1P17538 263 aa12.2□□□□□ -0.46
PCDHGC3-204ENST00000617222 ERHP84090 104 aaKnown RBP12.2□□□□□ -0.46
PCDHGC3-204ENST00000617222 KRTAP21-3Q3LHN1 58 aa12.2□□□□□ -0.46
PCDHGC3-204ENST00000617222 PDLIM3Q53GG5 364 aaPredicted RBP12.2□□□□□ -0.46
PCDHGC3-204ENST00000617222 CTRB2Q6GPI1 263 aa12.2□□□□□ -0.46
PCDHGC3-204ENST00000617222 TMEM65Q6PI78 240 aa12.2□□□□□ -0.46
PCDHGC3-204ENST00000617222 MRPL41Q8IXM3 137 aaKnown RBP12.2□□□□□ -0.46
PCDHGC3-204ENST00000617222 C3orf56Q8N813 242 aa12.2□□□□□ -0.46
PCDHGC3-204ENST00000617222 C2orf50Q96LR7 162 aa12.2□□□□□ -0.46
PCDHGC3-204ENST00000617222 RBKSQ9H477 322 aa12.2□□□□□ -0.46
PCDHGC3-204ENST00000617222 TCRBV4S1A1TA0A5B7 111 aa12.19□□□□□ -0.46
PCDHGC3-204ENST00000617222 RPLP1P05386 114 aaKnown RBP12.19□□□□□ -0.46
PCDHGC3-204ENST00000617222 DEFA4P12838 97 aa12.19□□□□□ -0.46
PCDHGC3-204ENST00000617222 PSMB8P28062 276 aa12.19□□□□□ -0.46
PCDHGC3-204ENST00000617222 NKX2-1P43699 371 aaPredicted RBP12.19□□□□□ -0.46
PCDHGC3-204ENST00000617222 RAB9AP51151 201 aa12.19□□□□□ -0.46
PCDHGC3-204ENST00000617222 OR2C3Q8N628 320 aa12.19□□□□□ -0.46
PCDHGC3-204ENST00000617222 OR4D5Q8NGN0 318 aa12.19□□□□□ -0.46
PCDHGC3-204ENST00000617222 CITED2Q99967 270 aaPredicted RBP12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms